RNA–Protein interactions for RNA: ENST00000459667.1

VARS-218, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 793 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-218ENST00000459667 ADAMTS9Q9P2N4 1935 aa21.12■□□□□ 0.97
VARS-218ENST00000459667 ARHGAP42A6NI28 874 aa21.11■□□□□ 0.97
VARS-218ENST00000459667 BCAT2O15382 392 aaPredicted RBP21.11■□□□□ 0.97
VARS-218ENST00000459667 LEFTY1O75610 366 aa21.11■□□□□ 0.97
VARS-218ENST00000459667 TMCC1O94876 653 aa21.11■□□□□ 0.97
VARS-218ENST00000459667 PROSCO94903 275 aa21.11■□□□□ 0.97
VARS-218ENST00000459667 IGHV4-34P06331 123 aa21.11■□□□□ 0.97
VARS-218ENST00000459667 ARSIQ5FYB1 569 aa21.11■□□□□ 0.97
VARS-218ENST00000459667 AGBL4Q5VU57 503 aa21.11■□□□□ 0.97
VARS-218ENST00000459667 POLNQ7Z5Q5 900 aa21.11■□□□□ 0.97
VARS-218ENST00000459667 RYBPQ8N488 228 aaPredicted RBP21.11■□□□□ 0.97
VARS-218ENST00000459667 OR2AP1Q8NGE2 309 aa21.11■□□□□ 0.97
VARS-218ENST00000459667 CASKIN2Q8WXE0 1202 aa21.11■□□□□ 0.97
VARS-218ENST00000459667 ARRDC3Q96B67 414 aa21.11■□□□□ 0.97
VARS-218ENST00000459667 PPP1R16AQ96I34 528 aa21.11■□□□□ 0.97
VARS-218ENST00000459667 SLC39A8Q9C0K1 460 aa21.11■□□□□ 0.97
VARS-218ENST00000459667 ZDHHC6Q9H6R6 413 aa21.11■□□□□ 0.97
VARS-218ENST00000459667 PCDH18Q9HCL0 1135 aa21.11■□□□□ 0.97
VARS-218ENST00000459667 HECAQ9UBI9 543 aaPredicted RBP21.11■□□□□ 0.97
VARS-218ENST00000459667 C4orf47A7E2U8 309 aa21.1■□□□□ 0.97
VARS-218ENST00000459667 PLRG1O43660 514 aaKnown RBP21.1■□□□□ 0.97
VARS-218ENST00000459667 GSRP00390 522 aa21.1■□□□□ 0.97
VARS-218ENST00000459667 CD27P26842 260 aa21.1■□□□□ 0.97
VARS-218ENST00000459667 GJC1P36383 396 aa21.1■□□□□ 0.97
VARS-218ENST00000459667 MAPK8P45983 427 aa21.1■□□□□ 0.97
VARS-218ENST00000459667 PAPOLAP51003 745 aaKnown RBP21.1■□□□□ 0.97
VARS-218ENST00000459667 SNRPD1P62314 119 aaKnown RBP21.1■□□□□ 0.97
VARS-218ENST00000459667 KRT81Q14533 505 aa21.1■□□□□ 0.97
VARS-218ENST00000459667 INO80DQ53TQ3 878 aaPredicted RBP21.1■□□□□ 0.97
VARS-218ENST00000459667 CPNE8Q86YQ8 564 aa21.1■□□□□ 0.97
VARS-218ENST00000459667 PLPP6Q8IY26 295 aa21.1■□□□□ 0.97
VARS-218ENST00000459667 NPWQ8N729 165 aa21.1■□□□□ 0.97
VARS-218ENST00000459667 OR6K2Q8NGY2 324 aa21.1■□□□□ 0.97
VARS-218ENST00000459667 C1orf216Q8TAB5 229 aa21.1■□□□□ 0.97
VARS-218ENST00000459667 SLC35G2Q8TBE7 412 aa21.1■□□□□ 0.97
VARS-218ENST00000459667 CSPG4P5Q96PW8 444 aa21.1■□□□□ 0.97
VARS-218ENST00000459667 GTPBP2Q9BX10 602 aaKnown RBP21.1■□□□□ 0.97
VARS-218ENST00000459667 KDM4CQ9H3R0 1056 aa21.1■□□□□ 0.97
VARS-218ENST00000459667 UBA2Q9UBT2 640 aaPredicted RBP21.1■□□□□ 0.97
VARS-218ENST00000459667 SLCO1B1Q9Y6L6 691 aa21.1■□□□□ 0.97
VARS-218ENST00000459667 TBC1D3DA0A087WVF3 549 aa21.09■□□□□ 0.97
VARS-218ENST00000459667 TBC1D3IA0A087WXS9 549 aa21.09■□□□□ 0.97
VARS-218ENST00000459667 TBC1D3EA0A087X179 549 aa21.09■□□□□ 0.97
VARS-218ENST00000459667 TBC1D3KA0A087X1G2 549 aa21.09■□□□□ 0.97
VARS-218ENST00000459667 TBC1D3FA6NER0 549 aaPredicted RBP21.09■□□□□ 0.97
VARS-218ENST00000459667 TMEM110-MUSTN1A8MSY1 372 aa21.09■□□□□ 0.97
VARS-218ENST00000459667 GOLGA6L6A8MZA4 724 aa21.09■□□□□ 0.97
VARS-218ENST00000459667 TBC1D3LB9A6J9 549 aa21.09■□□□□ 0.97
VARS-218ENST00000459667 RNF103O00237 685 aa21.09■□□□□ 0.97
VARS-218ENST00000459667 DFFAO00273 331 aa21.09■□□□□ 0.97
VARS-218ENST00000459667 ARHGAP33O14559 1287 aa21.09■□□□□ 0.97
VARS-218ENST00000459667 CDX4O14627 284 aaPredicted RBP21.09■□□□□ 0.97
VARS-218ENST00000459667 SYPP08247 313 aa21.09■□□□□ 0.97
VARS-218ENST00000459667 TBC1D3HP0C7X1 549 aa21.09■□□□□ 0.97
VARS-218ENST00000459667 ATXN3P54252 364 aaPredicted RBP21.09■□□□□ 0.97
VARS-218ENST00000459667 CDH6P55285 790 aa21.09■□□□□ 0.97
VARS-218ENST00000459667 RHOAP61586 193 aa21.09■□□□□ 0.97
VARS-218ENST00000459667 CCDC15Q0P6D6 951 aa21.09■□□□□ 0.97
VARS-218ENST00000459667 PIP5KL1Q5T9C9 394 aa21.09■□□□□ 0.97
VARS-218ENST00000459667 AFMIDQ63HM1 303 aa21.09■□□□□ 0.97
VARS-218ENST00000459667 TBC1D3GQ6DHY5 549 aa21.09■□□□□ 0.97
VARS-218ENST00000459667 TBC1D3CQ6IPX1 549 aa21.09■□□□□ 0.97
VARS-218ENST00000459667 DGLUCYQ7Z3D6 616 aa21.09■□□□□ 0.97
VARS-218ENST00000459667 ARHGAP12Q8IWW6 846 aa21.09■□□□□ 0.97
VARS-218ENST00000459667 RHOT2Q8IXI1 618 aa21.09■□□□□ 0.97
VARS-218ENST00000459667 TBC1D3Q8IZP1 549 aaPredicted RBP21.09■□□□□ 0.97
VARS-218ENST00000459667 NETO2Q8NC67 525 aa21.09■□□□□ 0.97
VARS-218ENST00000459667 RFFLQ8WZ73 363 aa21.09■□□□□ 0.97
VARS-218ENST00000459667 PDFQ9HBH1 243 aa21.09■□□□□ 0.97
VARS-218ENST00000459667 DCDC2BA2VCK2 349 aa21.08■□□□□ 0.97
VARS-218ENST00000459667 C10orf142B7Z368 130 aa21.08■□□□□ 0.97
VARS-218ENST00000459667 J3KR12 359 aa21.08■□□□□ 0.97
VARS-218ENST00000459667 PRAMEF11O60813 436 aa21.08■□□□□ 0.97
VARS-218ENST00000459667 IGSF6O95976 241 aa21.08■□□□□ 0.97
VARS-218ENST00000459667 AMPD1P23109 780 aa21.08■□□□□ 0.97
VARS-218ENST00000459667 MAN1A1P33908 653 aa21.08■□□□□ 0.97
VARS-218ENST00000459667 CCR5P51681 352 aa21.08■□□□□ 0.97
VARS-218ENST00000459667 PPP2CBP62714 309 aa21.08■□□□□ 0.97
VARS-218ENST00000459667 PPP2CAP67775 309 aa21.08■□□□□ 0.97
VARS-218ENST00000459667 MESDQ14696 234 aa21.08■□□□□ 0.97
VARS-218ENST00000459667 ATXN7L2Q5T6C5 722 aaPredicted RBP21.08■□□□□ 0.97
VARS-218ENST00000459667 TMCO3Q6UWJ1 677 aa21.08■□□□□ 0.97
VARS-218ENST00000459667 ERN2Q76MJ5 926 aaKnown RBP21.08■□□□□ 0.97
VARS-218ENST00000459667 LZTR1Q8N653 840 aa21.08■□□□□ 0.97
VARS-218ENST00000459667 GDAP1L1Q96MZ0 367 aa21.08■□□□□ 0.97
VARS-218ENST00000459667 PANX2Q96RD6 677 aa21.08■□□□□ 0.97
VARS-218ENST00000459667 ORAI3Q9BRQ5 295 aa21.08■□□□□ 0.97
VARS-218ENST00000459667 SP110Q9HB58 689 aa21.08■□□□□ 0.97
VARS-218ENST00000459667 TM9SF3Q9HD45 589 aa21.08■□□□□ 0.97
VARS-218ENST00000459667 INTUQ9ULD6 942 aa21.08■□□□□ 0.97
VARS-218ENST00000459667 TPX2Q9ULW0 747 aaKnown RBP21.08■□□□□ 0.97
VARS-218ENST00000459667 MFHAS1Q9Y4C4 1052 aa21.08■□□□□ 0.97
VARS-218ENST00000459667 CACNA1EQ15878 2313 aa21.07■□□□□ 0.96
VARS-218ENST00000459667 PLXNA2O75051 1894 aa21.07■□□□□ 0.96
VARS-218ENST00000459667 A0A1W2PPC4 97 aa21.07■□□□□ 0.96
VARS-218ENST00000459667 KRIT1O00522 736 aa21.07■□□□□ 0.96
VARS-218ENST00000459667 ITGB7P26010 798 aa21.07■□□□□ 0.96
VARS-218ENST00000459667 CDC25BP30305 580 aa21.07■□□□□ 0.96
VARS-218ENST00000459667 GKP32189 559 aa21.07■□□□□ 0.96
VARS-218ENST00000459667 AFF3P51826 1226 aaKnown RBP21.07■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms