RNA–Protein interactions for RNA: ENST00000458268.5

USP39-209, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 751 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-209ENST00000458268 DNASE2BQ8WZ79 361 aa19.03■□□□□ 0.64
USP39-209ENST00000458268 EXOC2Q96KP1 924 aa19.03■□□□□ 0.64
USP39-209ENST00000458268 HEPHQ9BQS7 1158 aa19.03■□□□□ 0.64
USP39-209ENST00000458268 CEP44Q9C0F1 390 aa19.03■□□□□ 0.64
USP39-209ENST00000458268 PCED1AQ9H1Q7 454 aa19.03■□□□□ 0.64
USP39-209ENST00000458268 RETREG1Q9H6L5 497 aa19.03■□□□□ 0.64
USP39-209ENST00000458268 CAPN10Q9HC96 672 aa19.03■□□□□ 0.64
USP39-209ENST00000458268 AASDHPPTQ9NRN7 309 aa19.03■□□□□ 0.64
USP39-209ENST00000458268 KLHL11Q9NVR0 708 aa19.03■□□□□ 0.64
USP39-209ENST00000458268 CWC15Q9P013 229 aaKnown RBP19.03■□□□□ 0.64
USP39-209ENST00000458268 DOCK9Q9BZ29 2069 aa19.02■□□□□ 0.64
USP39-209ENST00000458268 A0A1B0GVT2 93 aa19.02■□□□□ 0.64
USP39-209ENST00000458268 SSU72P8A0A1W2PR75 194 aa19.02■□□□□ 0.64
USP39-209ENST00000458268 IGHV4-34P06331 123 aa19.02■□□□□ 0.64
USP39-209ENST00000458268 RARAP10276 462 aa19.02■□□□□ 0.64
USP39-209ENST00000458268 HTR7P34969 479 aa19.02■□□□□ 0.64
USP39-209ENST00000458268 PCK1P35558 622 aa19.02■□□□□ 0.64
USP39-209ENST00000458268 LIMK1P53667 647 aa19.02■□□□□ 0.64
USP39-209ENST00000458268 YBEYP58557 167 aaPredicted RBP19.02■□□□□ 0.64
USP39-209ENST00000458268 ACAP1Q15027 740 aa19.02■□□□□ 0.64
USP39-209ENST00000458268 PARP15Q460N3 678 aa19.02■□□□□ 0.64
USP39-209ENST00000458268 PPM1JQ5JR12 505 aa19.02■□□□□ 0.64
USP39-209ENST00000458268 GAS2L3Q86XJ1 694 aa19.02■□□□□ 0.64
USP39-209ENST00000458268 KLK6Q92876 244 aa19.02■□□□□ 0.64
USP39-209ENST00000458268 PPP1R16AQ96I34 528 aa19.02■□□□□ 0.64
USP39-209ENST00000458268 SLC6A18Q96N87 628 aa19.02■□□□□ 0.64
USP39-209ENST00000458268 MYOCQ99972 504 aa19.02■□□□□ 0.64
USP39-209ENST00000458268 SLC39A8Q9C0K1 460 aa19.02■□□□□ 0.64
USP39-209ENST00000458268 SP110Q9HB58 689 aa19.02■□□□□ 0.64
USP39-209ENST00000458268 TM9SF3Q9HD45 589 aa19.02■□□□□ 0.64
USP39-209ENST00000458268 UBA2Q9UBT2 640 aaPredicted RBP19.02■□□□□ 0.64
USP39-209ENST00000458268 MFHAS1Q9Y4C4 1052 aa19.02■□□□□ 0.64
USP39-209ENST00000458268 TMEM131Q92545 1883 aa19.02■□□□□ 0.64
USP39-209ENST00000458268 SHROOM3Q8TF72 1996 aa19.02■□□□□ 0.64
USP39-209ENST00000458268 ARHGAP42A6NI28 874 aa19.01■□□□□ 0.63
USP39-209ENST00000458268 WASH4PA8MWX3 477 aa19.01■□□□□ 0.63
USP39-209ENST00000458268 EIF3CLB5ME19 914 aaKnown RBP19.01■□□□□ 0.63
USP39-209ENST00000458268 CDX4O14627 284 aaPredicted RBP19.01■□□□□ 0.63
USP39-209ENST00000458268 ZNF821O75541 412 aaPredicted RBP19.01■□□□□ 0.63
USP39-209ENST00000458268 PCDH8O95206 1070 aa19.01■□□□□ 0.63
USP39-209ENST00000458268 CD160O95971 181 aa19.01■□□□□ 0.63
USP39-209ENST00000458268 AMPD1P23109 780 aa19.01■□□□□ 0.63
USP39-209ENST00000458268 CD27P26842 260 aa19.01■□□□□ 0.63
USP39-209ENST00000458268 PAPOLAP51003 745 aaKnown RBP19.01■□□□□ 0.63
USP39-209ENST00000458268 CDH6P55285 790 aa19.01■□□□□ 0.63
USP39-209ENST00000458268 SNRPD1P62314 119 aaKnown RBP19.01■□□□□ 0.63
USP39-209ENST00000458268 SERINC3Q13530 473 aa19.01■□□□□ 0.63
USP39-209ENST00000458268 MESDQ14696 234 aa19.01■□□□□ 0.63
USP39-209ENST00000458268 TEAD4Q15561 434 aa19.01■□□□□ 0.63
USP39-209ENST00000458268 HADHQ16836 314 aaKnown RBP19.01■□□□□ 0.63
USP39-209ENST00000458268 AGBL4Q5VU57 503 aa19.01■□□□□ 0.63
USP39-209ENST00000458268 UMODL1-AS1Q8N2C9 162 aa19.01■□□□□ 0.63
USP39-209ENST00000458268 PAF1Q8N7H5 531 aa19.01■□□□□ 0.63
USP39-209ENST00000458268 TMIEQ8NEW7 156 aa19.01■□□□□ 0.63
USP39-209ENST00000458268 EIF3CQ99613 913 aaKnown RBP19.01■□□□□ 0.63
USP39-209ENST00000458268 OSGEPQ9NPF4 335 aa19.01■□□□□ 0.63
USP39-209ENST00000458268 DONSONQ9NYP3 566 aa19.01■□□□□ 0.63
USP39-209ENST00000458268 NENFQ9UMX5 172 aa19.01■□□□□ 0.63
USP39-209ENST00000458268 WASF2Q9Y6W5 498 aa19.01■□□□□ 0.63
USP39-209ENST00000458268 ZSCAN5CA6NGD5 496 aaPredicted RBP19■□□□□ 0.63
USP39-209ENST00000458268 J3KR12 359 aa19■□□□□ 0.63
USP39-209ENST00000458268 OPHN1O60890 802 aa19■□□□□ 0.63
USP39-209ENST00000458268 IGSF6O95976 241 aa19■□□□□ 0.63
USP39-209ENST00000458268 UGT2B4P06133 528 aa19■□□□□ 0.63
USP39-209ENST00000458268 TNNT1P13805 278 aa19■□□□□ 0.63
USP39-209ENST00000458268 AFF3P51826 1226 aaKnown RBP19■□□□□ 0.63
USP39-209ENST00000458268 TBX2Q13207 712 aaPredicted RBP19■□□□□ 0.63
USP39-209ENST00000458268 ASTE1Q2TB18 679 aaPredicted RBP19■□□□□ 0.63
USP39-209ENST00000458268 BOLA3Q53S33 107 aa19■□□□□ 0.63
USP39-209ENST00000458268 FBXL19Q6PCT2 694 aa19■□□□□ 0.63
USP39-209ENST00000458268 NPWQ8N729 165 aa19■□□□□ 0.63
USP39-209ENST00000458268 NIPA2Q8N8Q9 360 aa19■□□□□ 0.63
USP39-209ENST00000458268 OR2AP1Q8NGE2 309 aa19■□□□□ 0.63
USP39-209ENST00000458268 SERAC1Q96JX3 654 aa19■□□□□ 0.63
USP39-209ENST00000458268 GDAP1L1Q96MZ0 367 aa19■□□□□ 0.63
USP39-209ENST00000458268 UVRAGQ9P2Y5 699 aa19■□□□□ 0.63
USP39-209ENST00000458268 ASCC3Q8N3C0 2202 aaKnown RBP18.99■□□□□ 0.63
USP39-209ENST00000458268 PLRG1O43660 514 aaKnown RBP18.99■□□□□ 0.63
USP39-209ENST00000458268 RNGTTO60942 597 aaKnown RBP18.99■□□□□ 0.63
USP39-209ENST00000458268 GSRP00390 522 aa18.99■□□□□ 0.63
USP39-209ENST00000458268 TMEM253P0C7T8 217 aa18.99■□□□□ 0.63
USP39-209ENST00000458268 NEK3P51956 506 aa18.99■□□□□ 0.63
USP39-209ENST00000458268 NDST2P52849 883 aa18.99■□□□□ 0.63
USP39-209ENST00000458268 C21orf59P57076 290 aa18.99■□□□□ 0.63
USP39-209ENST00000458268 SLC25A11Q02978 314 aaKnown RBP18.99■□□□□ 0.63
USP39-209ENST00000458268 MMRN1Q13201 1228 aa18.99■□□□□ 0.63
USP39-209ENST00000458268 ATP13A4Q4VNC1 1196 aa18.99■□□□□ 0.63
USP39-209ENST00000458268 LRRC73Q5JTD7 316 aa18.99■□□□□ 0.63
USP39-209ENST00000458268 PIP5KL1Q5T9C9 394 aa18.99■□□□□ 0.63
USP39-209ENST00000458268 ARHGAP36Q6ZRI8 547 aa18.99■□□□□ 0.63
USP39-209ENST00000458268 ERN2Q76MJ5 926 aaKnown RBP18.99■□□□□ 0.63
USP39-209ENST00000458268 PRPF39Q86UA1 669 aaKnown RBP18.99■□□□□ 0.63
USP39-209ENST00000458268 PSTKQ8IV42 348 aaKnown RBP18.99■□□□□ 0.63
USP39-209ENST00000458268 TP53INP2Q8IXH6 220 aa18.99■□□□□ 0.63
USP39-209ENST00000458268 TC2NQ8N9U0 490 aa18.99■□□□□ 0.63
USP39-209ENST00000458268 DEFB124Q8NES8 71 aa18.99■□□□□ 0.63
USP39-209ENST00000458268 CALN1Q9BXU9 219 aa18.99■□□□□ 0.63
USP39-209ENST00000458268 LRRC19Q9H756 370 aa18.99■□□□□ 0.63
USP39-209ENST00000458268 EBF2Q9HAK2 575 aa18.99■□□□□ 0.63
USP39-209ENST00000458268 PCDH18Q9HCL0 1135 aa18.99■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms