RNA–Protein interactions for RNA: ENST00000456948.5

CBX3-204, Transcript of chromobox 3, humanhuman

TSL 5

Gene CBX3, Length 1,068 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-204ENST00000456948 PRPF39Q86UA1 669 aaKnown RBP23.6■■□□□ 1.37
CBX3-204ENST00000456948 ARHGEF26Q96DR7 871 aa23.6■■□□□ 1.37
CBX3-204ENST00000456948 MRFAP1L1Q96HT8 127 aa23.6■■□□□ 1.37
CBX3-204ENST00000456948 RBSNQ9H1K0 784 aa23.6■■□□□ 1.37
CBX3-204ENST00000456948 NENFQ9UMX5 172 aa23.6■■□□□ 1.37
CBX3-204ENST00000456948 CHD5Q8TDI0 1954 aa23.6■■□□□ 1.37
CBX3-204ENST00000456948 POP4O95707 220 aaKnown RBP23.59■■□□□ 1.37
CBX3-204ENST00000456948 ERCC2P18074 760 aa23.59■■□□□ 1.37
CBX3-204ENST00000456948 KCNA4P22459 653 aa23.59■■□□□ 1.37
CBX3-204ENST00000456948 CCNHP51946 323 aaPredicted RBP23.59■■□□□ 1.37
CBX3-204ENST00000456948 CNTN1Q12860 1018 aa23.59■■□□□ 1.37
CBX3-204ENST00000456948 KRT81Q14533 505 aa23.59■■□□□ 1.37
CBX3-204ENST00000456948 KCNT1Q5JUK3 1230 aa23.59■■□□□ 1.37
CBX3-204ENST00000456948 ADAT2Q7Z6V5 191 aaKnown RBP23.59■■□□□ 1.37
CBX3-204ENST00000456948 OR2AP1Q8NGE2 309 aa23.59■■□□□ 1.37
CBX3-204ENST00000456948 GRIN3AQ8TCU5 1115 aa23.59■■□□□ 1.37
CBX3-204ENST00000456948 HMCESQ96FZ2 354 aa23.59■■□□□ 1.37
CBX3-204ENST00000456948 CHP1Q99653 195 aa23.59■■□□□ 1.37
CBX3-204ENST00000456948 LUC7LQ9NQ29 371 aaKnown RBP23.59■■□□□ 1.37
CBX3-204ENST00000456948 STAU2Q9NUL3 570 aaKnown RBP eCLIP23.59■■□□□ 1.37
CBX3-204ENST00000456948 OPHN1O60890 802 aa23.58■■□□□ 1.37
CBX3-204ENST00000456948 LEFTY1O75610 366 aa23.58■■□□□ 1.37
CBX3-204ENST00000456948 RARAP10276 462 aa23.58■■□□□ 1.37
CBX3-204ENST00000456948 DRD3P35462 400 aa23.58■■□□□ 1.37
CBX3-204ENST00000456948 SMTNL2Q2TAL5 461 aa23.58■■□□□ 1.37
CBX3-204ENST00000456948 UAP1L1Q3KQV9 507 aa23.58■■□□□ 1.37
CBX3-204ENST00000456948 POM121L1PQ3SYA9 428 aa23.58■■□□□ 1.37
CBX3-204ENST00000456948 SLC45A4Q5BKX6 768 aa23.58■■□□□ 1.37
CBX3-204ENST00000456948 NEK5Q6P3R8 708 aa23.58■■□□□ 1.37
CBX3-204ENST00000456948 MAP7D3Q8IWC1 876 aa23.58■■□□□ 1.37
CBX3-204ENST00000456948 RHOT2Q8IXI1 618 aa23.58■■□□□ 1.37
CBX3-204ENST00000456948 BTBD6Q96KE9 485 aa23.58■■□□□ 1.37
CBX3-204ENST00000456948 GDAP1L1Q96MZ0 367 aa23.58■■□□□ 1.37
CBX3-204ENST00000456948 OSBPL1AQ9BXW6 950 aa23.58■■□□□ 1.37
CBX3-204ENST00000456948 HDAC8Q9BY41 377 aa23.58■■□□□ 1.37
CBX3-204ENST00000456948 TM6SF2Q9BZW4 377 aa23.58■■□□□ 1.37
CBX3-204ENST00000456948 NOL6Q9H6R4 1146 aaKnown RBP23.58■■□□□ 1.37
CBX3-204ENST00000456948 PREBQ9HCU5 417 aa23.58■■□□□ 1.37
CBX3-204ENST00000456948 CWC15Q9P013 229 aaKnown RBP23.58■■□□□ 1.37
CBX3-204ENST00000456948 UBA2Q9UBT2 640 aaPredicted RBP23.58■■□□□ 1.37
CBX3-204ENST00000456948 INTUQ9ULD6 942 aa23.58■■□□□ 1.37
CBX3-204ENST00000456948 NYNRINQ9P2P1 1898 aaKnown RBP23.58■■□□□ 1.36
CBX3-204ENST00000456948 A0A1W2PPC4 97 aa23.57■■□□□ 1.36
CBX3-204ENST00000456948 PLRG1O43660 514 aaKnown RBP23.57■■□□□ 1.36
CBX3-204ENST00000456948 PROSCO94903 275 aa23.57■■□□□ 1.36
CBX3-204ENST00000456948 IGSF6O95976 241 aa23.57■■□□□ 1.36
CBX3-204ENST00000456948 KRT7P08729 469 aa23.57■■□□□ 1.36
CBX3-204ENST00000456948 ZNF75DP51815 510 aa23.57■■□□□ 1.36
CBX3-204ENST00000456948 RHOAP61586 193 aa23.57■■□□□ 1.36
CBX3-204ENST00000456948 RACK1P63244 317 aaKnown RBP23.57■■□□□ 1.36
CBX3-204ENST00000456948 FBXL19Q6PCT2 694 aa23.57■■□□□ 1.36
CBX3-204ENST00000456948 TMCO3Q6UWJ1 677 aa23.57■■□□□ 1.36
CBX3-204ENST00000456948 ERN2Q76MJ5 926 aaKnown RBP23.57■■□□□ 1.36
CBX3-204ENST00000456948 CHST14Q8NCH0 376 aa23.57■■□□□ 1.36
CBX3-204ENST00000456948 FAM131CQ96AQ9 280 aa23.57■■□□□ 1.36
CBX3-204ENST00000456948 ZDHHC6Q9H6R6 413 aa23.57■■□□□ 1.36
CBX3-204ENST00000456948 LRRC19Q9H756 370 aa23.57■■□□□ 1.36
CBX3-204ENST00000456948 RCOR3Q9P2K3 495 aaPredicted RBP23.57■■□□□ 1.36
CBX3-204ENST00000456948 CACNA1EQ15878 2313 aa23.56■■□□□ 1.36
CBX3-204ENST00000456948 KRIT1O00522 736 aa23.56■■□□□ 1.36
CBX3-204ENST00000456948 CDX4O14627 284 aaPredicted RBP23.56■■□□□ 1.36
CBX3-204ENST00000456948 ZNF821O75541 412 aaPredicted RBP23.56■■□□□ 1.36
CBX3-204ENST00000456948 TMCC1O94876 653 aa23.56■■□□□ 1.36
CBX3-204ENST00000456948 CER1O95813 267 aa23.56■■□□□ 1.36
CBX3-204ENST00000456948 CD160O95971 181 aa23.56■■□□□ 1.36
CBX3-204ENST00000456948 IGHV4-34P06331 123 aa23.56■■□□□ 1.36
CBX3-204ENST00000456948 CTSLP07711 333 aa23.56■■□□□ 1.36
CBX3-204ENST00000456948 IL1R2P27930 398 aa23.56■■□□□ 1.36
CBX3-204ENST00000456948 SERPINB6P35237 376 aa23.56■■□□□ 1.36
CBX3-204ENST00000456948 ARHGAP25P42331 645 aa23.56■■□□□ 1.36
CBX3-204ENST00000456948 GRIA4P48058 902 aa23.56■■□□□ 1.36
CBX3-204ENST00000456948 GRM3Q14832 879 aa23.56■■□□□ 1.36
CBX3-204ENST00000456948 SPA17Q15506 151 aa23.56■■□□□ 1.36
CBX3-204ENST00000456948 MYLK3Q32MK0 819 aa23.56■■□□□ 1.36
CBX3-204ENST00000456948 ZFYVE27Q5T4F4 411 aa23.56■■□□□ 1.36
CBX3-204ENST00000456948 AGBL4Q5VU57 503 aa23.56■■□□□ 1.36
CBX3-204ENST00000456948 LEKR1Q6ZMV7 388 aa23.56■■□□□ 1.36
CBX3-204ENST00000456948 CYP4V2Q6ZWL3 525 aaPredicted RBP23.56■■□□□ 1.36
CBX3-204ENST00000456948 CELF6Q96J87 481 aaKnown RBP23.56■■□□□ 1.36
CBX3-204ENST00000456948 SLC39A8Q9C0K1 460 aa23.56■■□□□ 1.36
CBX3-204ENST00000456948 SP110Q9HB58 689 aa23.56■■□□□ 1.36
CBX3-204ENST00000456948 TM9SF3Q9HD45 589 aa23.56■■□□□ 1.36
CBX3-204ENST00000456948 SPTLC3Q9NUV7 552 aa23.56■■□□□ 1.36
CBX3-204ENST00000456948 DFFAO00273 331 aa23.55■■□□□ 1.36
CBX3-204ENST00000456948 ITGB7P26010 798 aa23.55■■□□□ 1.36
CBX3-204ENST00000456948 MAN1A1P33908 653 aa23.55■■□□□ 1.36
CBX3-204ENST00000456948 PAPOLAP51003 745 aaKnown RBP23.55■■□□□ 1.36
CBX3-204ENST00000456948 NEK3P51956 506 aa23.55■■□□□ 1.36
CBX3-204ENST00000456948 CDH6P55285 790 aa23.55■■□□□ 1.36
CBX3-204ENST00000456948 C21orf59P57076 290 aa23.55■■□□□ 1.36
CBX3-204ENST00000456948 SETMARQ53H47 684 aaPredicted RBP23.55■■□□□ 1.36
CBX3-204ENST00000456948 POLNQ7Z5Q5 900 aa23.55■■□□□ 1.36
CBX3-204ENST00000456948 CCDC170Q8IYT3 715 aa23.55■■□□□ 1.36
CBX3-204ENST00000456948 MINDY1Q8N5J2 469 aa23.55■■□□□ 1.36
CBX3-204ENST00000456948 KCTD6Q8NC69 237 aa23.55■■□□□ 1.36
CBX3-204ENST00000456948 C1orf216Q8TAB5 229 aa23.55■■□□□ 1.36
CBX3-204ENST00000456948 SLC35G2Q8TBE7 412 aa23.55■■□□□ 1.36
CBX3-204ENST00000456948 PACSIN1Q9BY11 444 aa23.55■■□□□ 1.36
CBX3-204ENST00000456948 SLC32A1Q9H598 525 aa23.55■■□□□ 1.36
CBX3-204ENST00000456948 DMTF1Q9Y222 760 aa23.55■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms