RNA–Protein interactions for RNA: ENST00000456563.1

FAM239A-203, Transcript of family with sequence similarity 239 member A, humanhuman

TSL 3

Gene FAM239A, Length 793 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM239A-203ENST00000456563 R3HDM2Q9Y2K5 976 aaKnown RBP18.16■□□□□ 0.5
FAM239A-203ENST00000456563 FARP1Q9Y4F1 1045 aaPredicted RBP18.16■□□□□ 0.5
FAM239A-203ENST00000456563 TCRBV21S2A2A0A5A6 115 aa18.15■□□□□ 0.5
FAM239A-203ENST00000456563 H7C0C1 242 aa18.15■□□□□ 0.5
FAM239A-203ENST00000456563 MCF2LO15068 1137 aa18.15■□□□□ 0.5
FAM239A-203ENST00000456563 ALOX15BO15296 676 aa18.15■□□□□ 0.5
FAM239A-203ENST00000456563 ZBTB24O43167 697 aaPredicted RBP18.15■□□□□ 0.5
FAM239A-203ENST00000456563 MTSS1O43312 755 aa18.15■□□□□ 0.5
FAM239A-203ENST00000456563 ALDH1A2O94788 518 aa18.15■□□□□ 0.5
FAM239A-203ENST00000456563 APBB3O95704 486 aa18.15■□□□□ 0.5
FAM239A-203ENST00000456563 TUBB4AP04350 444 aa18.15■□□□□ 0.5
FAM239A-203ENST00000456563 RBP3P10745 1247 aa18.15■□□□□ 0.5
FAM239A-203ENST00000456563 CASQ1P31415 396 aa18.15■□□□□ 0.5
FAM239A-203ENST00000456563 HSPA9P38646 679 aaKnown RBP18.15■□□□□ 0.5
FAM239A-203ENST00000456563 MMP13P45452 471 aa18.15■□□□□ 0.5
FAM239A-203ENST00000456563 RECQLP46063 649 aaPredicted RBP18.15■□□□□ 0.5
FAM239A-203ENST00000456563 ATP5OP48047 213 aa18.15■□□□□ 0.5
FAM239A-203ENST00000456563 CSNK1DP48730 415 aa18.15■□□□□ 0.5
FAM239A-203ENST00000456563 NSUN2Q08J23 767 aaKnown RBP eCLIP18.15■□□□□ 0.5
FAM239A-203ENST00000456563 ZNF235Q14590 738 aa18.15■□□□□ 0.5
FAM239A-203ENST00000456563 SIX1Q15475 284 aaPredicted RBP18.15■□□□□ 0.5
FAM239A-203ENST00000456563 LONRF2Q1L5Z9 754 aa18.15■□□□□ 0.5
FAM239A-203ENST00000456563 DPY19L3Q6ZPD9 716 aa18.15■□□□□ 0.5
FAM239A-203ENST00000456563 ADAT2Q7Z6V5 191 aaKnown RBP18.15■□□□□ 0.5
FAM239A-203ENST00000456563 MAML2Q8IZL2 1156 aaPredicted RBP18.15■□□□□ 0.5
FAM239A-203ENST00000456563 STK40Q8N2I9 435 aa18.15■□□□□ 0.5
FAM239A-203ENST00000456563 TSEN2Q8NCE0 465 aaKnown RBP18.15■□□□□ 0.5
FAM239A-203ENST00000456563 SLC35B2Q8TB61 432 aa18.15■□□□□ 0.5
FAM239A-203ENST00000456563 OR8D1Q8WZ84 308 aa18.15■□□□□ 0.5
FAM239A-203ENST00000456563 C16orf45Q96MC5 204 aaPredicted RBP18.15■□□□□ 0.5
FAM239A-203ENST00000456563 GDAP1L1Q96MZ0 367 aa18.15■□□□□ 0.5
FAM239A-203ENST00000456563 HHIPQ96QV1 700 aa18.15■□□□□ 0.5
FAM239A-203ENST00000456563 IL12RB2Q99665 862 aa18.15■□□□□ 0.5
FAM239A-203ENST00000456563 MKRN2Q9H000 416 aaKnown RBP18.15■□□□□ 0.5
FAM239A-203ENST00000456563 RSPH9Q9H1X1 276 aaPredicted RBP18.15■□□□□ 0.5
FAM239A-203ENST00000456563 FBXO4Q9UKT5 387 aa18.15■□□□□ 0.5
FAM239A-203ENST00000456563 SAR1BQ9Y6B6 198 aa18.15■□□□□ 0.5
FAM239A-203ENST00000456563 CKAP5Q14008 2032 aa18.15■□□□□ 0.5
FAM239A-203ENST00000456563 ZDBF2Q9HCK1 2354 aa18.15■□□□□ 0.5
FAM239A-203ENST00000456563 BCLAF3A2AJT9 711 aaKnown RBP18.14■□□□□ 0.49
FAM239A-203ENST00000456563 KCNK1O00180 336 aa18.14■□□□□ 0.49
FAM239A-203ENST00000456563 MUSKO15146 869 aa18.14■□□□□ 0.49
FAM239A-203ENST00000456563 BNIP3LO60238 219 aa18.14■□□□□ 0.49
FAM239A-203ENST00000456563 ZNF189O75820 626 aaPredicted RBP18.14■□□□□ 0.49
FAM239A-203ENST00000456563 IGSF6O95976 241 aa18.14■□□□□ 0.49
FAM239A-203ENST00000456563 GABRG2P18507 467 aa18.14■□□□□ 0.49
FAM239A-203ENST00000456563 B4GALNT4Q76KP1 1039 aa18.14■□□□□ 0.49
FAM239A-203ENST00000456563 RASSF3Q86WH2 238 aa18.14■□□□□ 0.49
FAM239A-203ENST00000456563 TMPRSS6Q8IU80 811 aa18.14■□□□□ 0.49
FAM239A-203ENST00000456563 CDKL3Q8IVW4 592 aaPredicted RBP18.14■□□□□ 0.49
FAM239A-203ENST00000456563 PGBD5Q8N414 524 aa18.14■□□□□ 0.49
FAM239A-203ENST00000456563 ZNF419Q96HQ0 510 aaPredicted RBP18.14■□□□□ 0.49
FAM239A-203ENST00000456563 MS4A14Q96JA4 679 aa18.14■□□□□ 0.49
FAM239A-203ENST00000456563 MRGPRX1Q96LB2 322 aa18.14■□□□□ 0.49
FAM239A-203ENST00000456563 NAP1L3Q99457 506 aaPredicted RBP18.14■□□□□ 0.49
FAM239A-203ENST00000456563 FAM118BQ9BPY3 351 aa18.14■□□□□ 0.49
FAM239A-203ENST00000456563 MGME1Q9BQP7 344 aa18.14■□□□□ 0.49
FAM239A-203ENST00000456563 HEPHQ9BQS7 1158 aa18.14■□□□□ 0.49
FAM239A-203ENST00000456563 RBM22Q9NW64 420 aaKnown RBP eCLIP18.14■□□□□ 0.49
FAM239A-203ENST00000456563 HECAQ9UBI9 543 aaPredicted RBP18.14■□□□□ 0.49
FAM239A-203ENST00000456563 EBF1Q9UH73 591 aa18.14■□□□□ 0.49
FAM239A-203ENST00000456563 PGRMC1O00264 195 aaKnown RBP18.13■□□□□ 0.49
FAM239A-203ENST00000456563 ZNF185O15231 689 aa18.13■□□□□ 0.49
FAM239A-203ENST00000456563 GALR2O43603 387 aaPredicted RBP18.13■□□□□ 0.49
FAM239A-203ENST00000456563 LIASO43766 372 aa18.13■□□□□ 0.49
FAM239A-203ENST00000456563 RNASEH1O60930 286 aaKnown RBP18.13■□□□□ 0.49
FAM239A-203ENST00000456563 POP4O95707 220 aaKnown RBP18.13■□□□□ 0.49
FAM239A-203ENST00000456563 JCHAINP01591 159 aa18.13■□□□□ 0.49
FAM239A-203ENST00000456563 TDGF1P13385 188 aa18.13■□□□□ 0.49
FAM239A-203ENST00000456563 NDUFV2P19404 249 aa18.13■□□□□ 0.49
FAM239A-203ENST00000456563 CR2P20023 1033 aa18.13■□□□□ 0.49
FAM239A-203ENST00000456563 RBL1P28749 1068 aa18.13■□□□□ 0.49
FAM239A-203ENST00000456563 CHRNA3P32297 505 aa18.13■□□□□ 0.49
FAM239A-203ENST00000456563 RGRP47804 291 aa18.13■□□□□ 0.49
FAM239A-203ENST00000456563 CCNHP51946 323 aaPredicted RBP18.13■□□□□ 0.49
FAM239A-203ENST00000456563 ZBTB17Q13105 803 aa18.13■□□□□ 0.49
FAM239A-203ENST00000456563 CCNG2Q16589 344 aa18.13■□□□□ 0.49
FAM239A-203ENST00000456563 MYLK3Q32MK0 819 aa18.13■□□□□ 0.49
FAM239A-203ENST00000456563 ATXN7L2Q5T6C5 722 aaPredicted RBP18.13■□□□□ 0.49
FAM239A-203ENST00000456563 ZNF776Q68DI1 518 aaPredicted RBP18.13■□□□□ 0.49
FAM239A-203ENST00000456563 HEATR6Q6AI08 1181 aaKnown RBP18.13■□□□□ 0.49
FAM239A-203ENST00000456563 DARS2Q6PI48 645 aaKnown RBP18.13■□□□□ 0.49
FAM239A-203ENST00000456563 DSG4Q86SJ6 1040 aa18.13■□□□□ 0.49
FAM239A-203ENST00000456563 CHST14Q8NCH0 376 aa18.13■□□□□ 0.49
FAM239A-203ENST00000456563 HTR3CQ8WXA8 447 aa18.13■□□□□ 0.49
FAM239A-203ENST00000456563 ERLEC1Q96DZ1 483 aa18.13■□□□□ 0.49
FAM239A-203ENST00000456563 LRIG1Q96JA1 1093 aa18.13■□□□□ 0.49
FAM239A-203ENST00000456563 VAT1Q99536 393 aa18.13■□□□□ 0.49
FAM239A-203ENST00000456563 HAUS2Q9NVX0 235 aa18.13■□□□□ 0.49
FAM239A-203ENST00000456563 DNPEPQ9ULA0 475 aa18.13■□□□□ 0.49
FAM239A-203ENST00000456563 PPM1HQ9ULR3 514 aa18.13■□□□□ 0.49
FAM239A-203ENST00000456563 ATP8A1Q9Y2Q0 1164 aa18.13■□□□□ 0.49
FAM239A-203ENST00000456563 KMT2EQ8IZD2 1858 aa18.12■□□□□ 0.49
FAM239A-203ENST00000456563 CCDC163A0A0D9SF12 145 aa18.12■□□□□ 0.49
FAM239A-203ENST00000456563 KIF2AO00139 706 aaPredicted RBP18.12■□□□□ 0.49
FAM239A-203ENST00000456563 NEBLO76041 1014 aa18.12■□□□□ 0.49
FAM239A-203ENST00000456563 PRNPP04156 253 aa18.12■□□□□ 0.49
FAM239A-203ENST00000456563 PTPN3P26045 913 aa18.12■□□□□ 0.49
FAM239A-203ENST00000456563 RPS14P62263 151 aaKnown RBP18.12■□□□□ 0.49
FAM239A-203ENST00000456563 ZBTB16Q05516 673 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms