RNA–Protein interactions for RNA: ENST00000456369.5

CHEK2-221, Transcript of checkpoint kinase 2, human

TSL 3

Gene CHEK2, Length 588 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHEK2-221	ENST00000456369	CD160	O95971	181 aa		10.16	□□□□□ -0.78
CHEK2-221	ENST00000456369	MT-CO1	P00395	513 aa		10.16	□□□□□ -0.78
CHEK2-221	ENST00000456369	IGLV3-19	P01714	112 aa		10.16	□□□□□ -0.78
CHEK2-221	ENST00000456369	LMNA	P02545	664 aa	Known RBP	10.16	□□□□□ -0.78
CHEK2-221	ENST00000456369	RARA	P10276	462 aa		10.16	□□□□□ -0.78
CHEK2-221	ENST00000456369	GLDC	P23378	1020 aa		10.16	□□□□□ -0.78
CHEK2-221	ENST00000456369	HCAR3	P49019	387 aa		10.16	□□□□□ -0.78
CHEK2-221	ENST00000456369	VSNL1	P62760	191 aa		10.16	□□□□□ -0.78
CHEK2-221	ENST00000456369	ARF5	P84085	180 aa		10.16	□□□□□ -0.78
CHEK2-221	ENST00000456369	SIM2	Q14190	667 aa	Predicted RBP	10.16	□□□□□ -0.78
CHEK2-221	ENST00000456369	MESD	Q14696	234 aa		10.16	□□□□□ -0.78
CHEK2-221	ENST00000456369	STARD3	Q14849	445 aa		10.16	□□□□□ -0.78
CHEK2-221	ENST00000456369	DPYSL2	Q16555	572 aa		10.16	□□□□□ -0.78
CHEK2-221	ENST00000456369	USP39	Q53GS9	565 aa	Known RBP	10.16	□□□□□ -0.78
CHEK2-221	ENST00000456369	BOLA3	Q53S33	107 aa		10.16	□□□□□ -0.78
CHEK2-221	ENST00000456369	KCNT1	Q5JUK3	1230 aa		10.16	□□□□□ -0.78
CHEK2-221	ENST00000456369	BEND6	Q5SZJ8	279 aa	Predicted RBP	10.16	□□□□□ -0.78
CHEK2-221	ENST00000456369	SEL1L2	Q5TEA6	688 aa		10.16	□□□□□ -0.78
CHEK2-221	ENST00000456369	TMPRSS6	Q8IU80	811 aa		10.16	□□□□□ -0.78
CHEK2-221	ENST00000456369	UMODL1-AS1	Q8N2C9	162 aa		10.16	□□□□□ -0.78
CHEK2-221	ENST00000456369	OR7D4	Q8NG98	312 aa		10.16	□□□□□ -0.78
CHEK2-221	ENST00000456369	OR2T3	Q8NH03	318 aa		10.16	□□□□□ -0.78
CHEK2-221	ENST00000456369	FAM71B	Q8TC56	605 aa		10.16	□□□□□ -0.78
CHEK2-221	ENST00000456369	LRRN4	Q8WUT4	740 aa		10.16	□□□□□ -0.78
CHEK2-221	ENST00000456369	TEKT4	Q8WW24	435 aa		10.16	□□□□□ -0.78
CHEK2-221	ENST00000456369	RLN3	Q8WXF3	142 aa		10.16	□□□□□ -0.78
CHEK2-221	ENST00000456369	PTPRN2	Q92932	1015 aa		10.16	□□□□□ -0.78
CHEK2-221	ENST00000456369	ARHGEF2	Q92974	986 aa	Known RBP	10.16	□□□□□ -0.78
CHEK2-221	ENST00000456369	RUNDC3B	Q96NL0	473 aa		10.16	□□□□□ -0.78
CHEK2-221	ENST00000456369	KCTD15	Q96SI1	283 aa	Predicted RBP	10.16	□□□□□ -0.78
CHEK2-221	ENST00000456369	C2orf49	Q9BVC5	232 aa	Predicted RBP	10.16	□□□□□ -0.78
CHEK2-221	ENST00000456369	KLC2	Q9H0B6	622 aa		10.16	□□□□□ -0.78
CHEK2-221	ENST00000456369	MUC3B	Q9H195	1237 aa		10.16	□□□□□ -0.78
CHEK2-221	ENST00000456369	RSPH9	Q9H1X1	276 aa	Predicted RBP	10.16	□□□□□ -0.78
CHEK2-221	ENST00000456369	ACBD3	Q9H3P7	528 aa		10.16	□□□□□ -0.78
CHEK2-221	ENST00000456369	GOLPH3	Q9H4A6	298 aa		10.16	□□□□□ -0.78
CHEK2-221	ENST00000456369	DHX35	Q9H5Z1	703 aa	Known RBP	10.16	□□□□□ -0.78
CHEK2-221	ENST00000456369	CD93	Q9NPY3	652 aa		10.16	□□□□□ -0.78
CHEK2-221	ENST00000456369	ITM2C	Q9NQX7	267 aa		10.16	□□□□□ -0.78
CHEK2-221	ENST00000456369	FAM53C	Q9NYF3	392 aa		10.16	□□□□□ -0.78
CHEK2-221	ENST00000456369	OGFR	Q9NZT2	677 aa		10.16	□□□□□ -0.78
CHEK2-221	ENST00000456369	USP36	Q9P275	1121 aa	Known RBP	10.16	□□□□□ -0.78
CHEK2-221	ENST00000456369	MBD1	Q9UIS9	605 aa	Predicted RBP	10.16	□□□□□ -0.78
CHEK2-221	ENST00000456369	SMG5	Q9UPR3	1016 aa	Known RBP	10.16	□□□□□ -0.78
CHEK2-221	ENST00000456369	SBDS	Q9Y3A5	250 aa	Known RBP eCLIP	10.16	□□□□□ -0.78
CHEK2-221	ENST00000456369	PCDHA3	Q9Y5H8	950 aa		10.16	□□□□□ -0.78
CHEK2-221	ENST00000456369		K7ERQ8	282 aa		10.15	□□□□□ -0.78
CHEK2-221	ENST00000456369	FGF10	O15520	208 aa	Predicted RBP	10.15	□□□□□ -0.78
CHEK2-221	ENST00000456369	PSTPIP1	O43586	416 aa		10.15	□□□□□ -0.78
CHEK2-221	ENST00000456369	SPOP	O43791	374 aa		10.15	□□□□□ -0.78
CHEK2-221	ENST00000456369	SIN3B	O75182	1162 aa		10.15	□□□□□ -0.78
CHEK2-221	ENST00000456369	ZNF821	O75541	412 aa	Predicted RBP	10.15	□□□□□ -0.78
CHEK2-221	ENST00000456369	SRC	P12931	536 aa		10.15	□□□□□ -0.78
CHEK2-221	ENST00000456369	VAV1	P15498	845 aa		10.15	□□□□□ -0.78
CHEK2-221	ENST00000456369	BCKDHB	P21953	392 aa		10.15	□□□□□ -0.78
CHEK2-221	ENST00000456369	COMT	P21964	271 aa		10.15	□□□□□ -0.78
CHEK2-221	ENST00000456369	IL4R	P24394	825 aa		10.15	□□□□□ -0.78
CHEK2-221	ENST00000456369	ACVRL1	P37023	503 aa		10.15	□□□□□ -0.78
CHEK2-221	ENST00000456369	ARSE	P51690	589 aa		10.15	□□□□□ -0.78
CHEK2-221	ENST00000456369	RWDD2B	P57060	319 aa		10.15	□□□□□ -0.78
CHEK2-221	ENST00000456369	ST8SIA6	P61647	398 aa		10.15	□□□□□ -0.78
CHEK2-221	ENST00000456369	DPYS	Q14117	519 aa		10.15	□□□□□ -0.78
CHEK2-221	ENST00000456369	LONRF2	Q1L5Z9	754 aa		10.15	□□□□□ -0.78
CHEK2-221	ENST00000456369	SMTNL2	Q2TAL5	461 aa		10.15	□□□□□ -0.78
CHEK2-221	ENST00000456369	PLK5	Q496M5	336 aa		10.15	□□□□□ -0.78
CHEK2-221	ENST00000456369	AFMID	Q63HM1	303 aa		10.15	□□□□□ -0.78
CHEK2-221	ENST00000456369	RFX8	Q6ZV50	586 aa		10.15	□□□□□ -0.78
CHEK2-221	ENST00000456369	HDX	Q7Z353	690 aa		10.15	□□□□□ -0.78
CHEK2-221	ENST00000456369	KBTBD6	Q86V97	674 aa		10.15	□□□□□ -0.78
CHEK2-221	ENST00000456369	IFT20	Q8IY31	132 aa		10.15	□□□□□ -0.78
CHEK2-221	ENST00000456369	SH2D3C	Q8N5H7	860 aa		10.15	□□□□□ -0.78
CHEK2-221	ENST00000456369	MAIP1	Q8WWC4	291 aa		10.15	□□□□□ -0.78
CHEK2-221	ENST00000456369	MS4A14	Q96JA4	679 aa		10.15	□□□□□ -0.78
CHEK2-221	ENST00000456369	FAM129B	Q96TA1	746 aa		10.15	□□□□□ -0.78
CHEK2-221	ENST00000456369	DUSP15	Q9H1R2	295 aa	Predicted RBP	10.15	□□□□□ -0.78
CHEK2-221	ENST00000456369	MAGEH1	Q9H213	219 aa		10.15	□□□□□ -0.78
CHEK2-221	ENST00000456369	LRRC19	Q9H756	370 aa		10.15	□□□□□ -0.78
CHEK2-221	ENST00000456369	VIPAS39	Q9H9C1	493 aa		10.15	□□□□□ -0.78
CHEK2-221	ENST00000456369	FBRS	Q9HAH7	460 aa		10.15	□□□□□ -0.78
CHEK2-221	ENST00000456369	PRDM16	Q9HAZ2	1276 aa		10.15	□□□□□ -0.78
CHEK2-221	ENST00000456369	STAU2	Q9NUL3	570 aa	Known RBP eCLIP	10.15	□□□□□ -0.78
CHEK2-221	ENST00000456369	ZNF446	Q9NWS9	450 aa		10.15	□□□□□ -0.78
CHEK2-221	ENST00000456369	CWC15	Q9P013	229 aa	Known RBP	10.15	□□□□□ -0.78
CHEK2-221	ENST00000456369	BCCIP	Q9P287	314 aa	Known RBP eCLIP	10.15	□□□□□ -0.78
CHEK2-221	ENST00000456369	SUN2	Q9UH99	717 aa		10.15	□□□□□ -0.78
CHEK2-221	ENST00000456369	INVS	Q9Y283	1065 aa		10.15	□□□□□ -0.78
CHEK2-221	ENST00000456369	CFAP54	Q96N23	3096 aa		10.14	□□□□□ -0.79
CHEK2-221	ENST00000456369	IGHV1OR15-9	A0A0B4J2B8	117 aa		10.14	□□□□□ -0.79
CHEK2-221	ENST00000456369	EDDM13	A0A1B0GTR0	161 aa		10.14	□□□□□ -0.79
CHEK2-221	ENST00000456369	CBX4	O00257	560 aa		10.14	□□□□□ -0.79
CHEK2-221	ENST00000456369	KRIT1	O00522	736 aa		10.14	□□□□□ -0.79
CHEK2-221	ENST00000456369	MAP2K7	O14733	419 aa		10.14	□□□□□ -0.79
CHEK2-221	ENST00000456369	SMAD6	O43541	496 aa	Known RBP	10.14	□□□□□ -0.79
CHEK2-221	ENST00000456369	KDELR3	O43731	214 aa		10.14	□□□□□ -0.79
CHEK2-221	ENST00000456369	GFRA3	O60609	400 aa		10.14	□□□□□ -0.79
CHEK2-221	ENST00000456369	RAMP2	O60895	175 aa		10.14	□□□□□ -0.79
CHEK2-221	ENST00000456369	ZNF217	O75362	1048 aa		10.14	□□□□□ -0.79
CHEK2-221	ENST00000456369	F12	P00748	615 aa	Predicted RBP	10.14	□□□□□ -0.79
CHEK2-221	ENST00000456369	GOT1	P17174	413 aa		10.14	□□□□□ -0.79
CHEK2-221	ENST00000456369	ETFB	P38117	255 aa		10.14	□□□□□ -0.79

Retrieved 100 of 20,778 RNA–protein pairs in 41 ms