RNA–Protein interactions for RNA: ENST00000455362.1

HMGB1P4-201, Transcript of high mobility group box 1 pseudogene 4, humanhuman

BASIC

Gene HMGB1P4, Length 567 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P4-201ENST00000455362 FOXB1Q99853 325 aa5.41□□□□□ -1.54
HMGB1P4-201ENST00000455362 PI4K2AQ9BTU6 479 aa5.41□□□□□ -1.54
HMGB1P4-201ENST00000455362 MRPL9Q9BYD2 267 aaKnown RBP5.41□□□□□ -1.54
HMGB1P4-201ENST00000455362 GPR63Q9BZJ6 419 aa5.41□□□□□ -1.54
HMGB1P4-201ENST00000455362 MTMR12Q9C0I1 747 aa5.41□□□□□ -1.54
HMGB1P4-201ENST00000455362 GPR88Q9GZN0 384 aa5.41□□□□□ -1.54
HMGB1P4-201ENST00000455362 XYLT2Q9H1B5 865 aa5.41□□□□□ -1.54
HMGB1P4-201ENST00000455362 NXF3Q9H4D5 531 aaKnown RBP5.41□□□□□ -1.54
HMGB1P4-201ENST00000455362 MTG2Q9H4K7 406 aa5.41□□□□□ -1.54
HMGB1P4-201ENST00000455362 WDCPQ9H6R7 721 aa5.41□□□□□ -1.54
HMGB1P4-201ENST00000455362 ZWILCHQ9H900 591 aa5.41□□□□□ -1.54
HMGB1P4-201ENST00000455362 NHEJ1Q9H9Q4 299 aaPredicted RBP5.41□□□□□ -1.54
HMGB1P4-201ENST00000455362 CD248Q9HCU0 757 aa5.41□□□□□ -1.54
HMGB1P4-201ENST00000455362 TBC1D23Q9NUY8 699 aa5.41□□□□□ -1.54
HMGB1P4-201ENST00000455362 TMEM160Q9NX00 188 aa5.41□□□□□ -1.54
HMGB1P4-201ENST00000455362 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP5.41□□□□□ -1.54
HMGB1P4-201ENST00000455362 ARHGAP20Q9P2F6 1191 aa5.41□□□□□ -1.54
HMGB1P4-201ENST00000455362 MYOTQ9UBF9 498 aa5.41□□□□□ -1.54
HMGB1P4-201ENST00000455362 ZC3H7BQ9UGR2 993 aaKnown RBP5.41□□□□□ -1.54
HMGB1P4-201ENST00000455362 SCOCQ9UIL1 159 aa5.41□□□□□ -1.54
HMGB1P4-201ENST00000455362 SIX4Q9UIU6 781 aa5.41□□□□□ -1.54
HMGB1P4-201ENST00000455362 DERAQ9Y315 318 aa5.41□□□□□ -1.54
HMGB1P4-201ENST00000455362 RWDD3Q9Y3V2 267 aa5.41□□□□□ -1.54
HMGB1P4-201ENST00000455362 C2CD2Q9Y426 696 aa5.41□□□□□ -1.54
HMGB1P4-201ENST00000455362 BZW2Q9Y6E2 419 aaKnown RBP5.41□□□□□ -1.54
HMGB1P4-201ENST00000455362 EPN1Q9Y6I3 576 aaPredicted RBP5.41□□□□□ -1.54
HMGB1P4-201ENST00000455362 TTC3P53804 2025 aa5.41□□□□□ -1.54
HMGB1P4-201ENST00000455362 A0A0U1RQF3 1178 aa5.4□□□□□ -1.54
HMGB1P4-201ENST00000455362 SMIM28A0A1B0GU29 152 aa5.4□□□□□ -1.54
HMGB1P4-201ENST00000455362 CLCA1A8K7I4 914 aa5.4□□□□□ -1.54
HMGB1P4-201ENST00000455362 EIF3CLB5ME19 914 aaKnown RBP5.4□□□□□ -1.54
HMGB1P4-201ENST00000455362 F8VZ95 297 aa5.4□□□□□ -1.54
HMGB1P4-201ENST00000455362 H7C0S8 307 aa5.4□□□□□ -1.54
HMGB1P4-201ENST00000455362 FCHO1O14526 889 aa5.4□□□□□ -1.54
HMGB1P4-201ENST00000455362 AP3D1O14617 1153 aa5.4□□□□□ -1.54
HMGB1P4-201ENST00000455362 HGSO14964 777 aaPredicted RBP5.4□□□□□ -1.54
HMGB1P4-201ENST00000455362 NDUFA10O95299 355 aa5.4□□□□□ -1.54
HMGB1P4-201ENST00000455362 BAG2O95816 211 aa5.4□□□□□ -1.54
HMGB1P4-201ENST00000455362 PLEKP08567 350 aaPredicted RBP5.4□□□□□ -1.54
HMGB1P4-201ENST00000455362 PNMA6AP0CW24 399 aaPredicted RBP5.4□□□□□ -1.54
HMGB1P4-201ENST00000455362 JUPP14923 745 aa5.4□□□□□ -1.54
HMGB1P4-201ENST00000455362 RAC2P15153 192 aa5.4□□□□□ -1.54
HMGB1P4-201ENST00000455362 FERP16591 822 aa5.4□□□□□ -1.54
HMGB1P4-201ENST00000455362 MSNP26038 577 aaKnown RBP5.4□□□□□ -1.54
HMGB1P4-201ENST00000455362 RPL10P27635 214 aaKnown RBP5.4□□□□□ -1.54
HMGB1P4-201ENST00000455362 PRKCIP41743 596 aa5.4□□□□□ -1.54
HMGB1P4-201ENST00000455362 KCNJ5P48544 419 aa5.4□□□□□ -1.54
HMGB1P4-201ENST00000455362 CARSP49589 748 aaKnown RBP5.4□□□□□ -1.54
HMGB1P4-201ENST00000455362 GALK1P51570 392 aa5.4□□□□□ -1.54
HMGB1P4-201ENST00000455362 SESN2P58004 480 aaPredicted RBP5.4□□□□□ -1.54
HMGB1P4-201ENST00000455362 FAM189BP81408 668 aa5.4□□□□□ -1.54
HMGB1P4-201ENST00000455362 RBP5P82980 135 aa5.4□□□□□ -1.54
HMGB1P4-201ENST00000455362 GCNT1Q02742 428 aa5.4□□□□□ -1.54
HMGB1P4-201ENST00000455362 KLHL30Q0D2K2 578 aa5.4□□□□□ -1.54
HMGB1P4-201ENST00000455362 CUL2Q13617 745 aa5.4□□□□□ -1.54
HMGB1P4-201ENST00000455362 RAB39AQ14964 217 aa5.4□□□□□ -1.54
HMGB1P4-201ENST00000455362 ASIC2Q16515 512 aa5.4□□□□□ -1.54
HMGB1P4-201ENST00000455362 ASTE1Q2TB18 679 aaPredicted RBP5.4□□□□□ -1.54
HMGB1P4-201ENST00000455362 ARHGAP15Q53QZ3 475 aa5.4□□□□□ -1.54
HMGB1P4-201ENST00000455362 SPOPLQ6IQ16 392 aa5.4□□□□□ -1.54
HMGB1P4-201ENST00000455362 ZNF783Q6ZMS7 281 aa5.4□□□□□ -1.54
HMGB1P4-201ENST00000455362 LRRC8DQ7L1W4 858 aa5.4□□□□□ -1.54
HMGB1P4-201ENST00000455362 ZNF765Q7L2R6 523 aa5.4□□□□□ -1.54
HMGB1P4-201ENST00000455362 ZNF571Q7Z3V5 609 aaPredicted RBP5.4□□□□□ -1.54
HMGB1P4-201ENST00000455362 KDELC2Q7Z4H8 507 aa5.4□□□□□ -1.54
HMGB1P4-201ENST00000455362 TRIM48Q8IWZ4 208 aa5.4□□□□□ -1.54
HMGB1P4-201ENST00000455362 REXO1L1PQ8IX06 675 aa5.4□□□□□ -1.54
HMGB1P4-201ENST00000455362 CCAR2Q8N163 923 aaKnown RBP5.4□□□□□ -1.54
HMGB1P4-201ENST00000455362 GLIS1Q8NBF1 620 aa5.4□□□□□ -1.54
HMGB1P4-201ENST00000455362 PHOSPHO1Q8TCT1 267 aa5.4□□□□□ -1.54
HMGB1P4-201ENST00000455362 IPCEF1Q8WWN9 437 aaPredicted RBP5.4□□□□□ -1.54
HMGB1P4-201ENST00000455362 SHC3Q92529 594 aa5.4□□□□□ -1.54
HMGB1P4-201ENST00000455362 TAF4BQ92750 862 aa5.4□□□□□ -1.54
HMGB1P4-201ENST00000455362 JAKMIP2Q96AA8 810 aa5.4□□□□□ -1.54
HMGB1P4-201ENST00000455362 C18orf25Q96B23 403 aaPredicted RBP5.4□□□□□ -1.54
HMGB1P4-201ENST00000455362 FAM81BQ96LP2 452 aa5.4□□□□□ -1.54
HMGB1P4-201ENST00000455362 CCDC42Q96M95 316 aa5.4□□□□□ -1.54
HMGB1P4-201ENST00000455362 EIF3CQ99613 913 aaKnown RBP5.4□□□□□ -1.54
HMGB1P4-201ENST00000455362 ADAM2Q99965 735 aa5.4□□□□□ -1.54
HMGB1P4-201ENST00000455362 APOL6Q9BWW8 343 aa5.4□□□□□ -1.54
HMGB1P4-201ENST00000455362 TRIM54Q9BYV2 358 aa5.4□□□□□ -1.54
HMGB1P4-201ENST00000455362 TXLNGYQ9BZA5 131 aa5.4□□□□□ -1.54
HMGB1P4-201ENST00000455362 MANSC1Q9H8J5 431 aa5.4□□□□□ -1.54
HMGB1P4-201ENST00000455362 APOBEC3GQ9HC16 384 aaKnown RBP5.4□□□□□ -1.54
HMGB1P4-201ENST00000455362 RGS18Q9NS28 235 aa5.4□□□□□ -1.54
HMGB1P4-201ENST00000455362 ERVK13-1Q9NX77 482 aa5.4□□□□□ -1.54
HMGB1P4-201ENST00000455362 DPP3Q9NY33 737 aa5.4□□□□□ -1.54
HMGB1P4-201ENST00000455362 ZNF212Q9UDV6 495 aa5.4□□□□□ -1.54
HMGB1P4-201ENST00000455362 ITGA11Q9UKX5 1188 aa5.4□□□□□ -1.54
HMGB1P4-201ENST00000455362 AGAP1Q9UPQ3 857 aa5.4□□□□□ -1.54
HMGB1P4-201ENST00000455362 TDRD15B5MCY1 1934 aaKnown RBP5.39□□□□□ -1.55
HMGB1P4-201ENST00000455362 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP5.39□□□□□ -1.55
HMGB1P4-201ENST00000455362 TRIM43BA6NCK2 446 aa5.39□□□□□ -1.55
HMGB1P4-201ENST00000455362 USP27XA6NNY8 438 aa5.39□□□□□ -1.55
HMGB1P4-201ENST00000455362 PTGESO14684 152 aa5.39□□□□□ -1.55
HMGB1P4-201ENST00000455362 ZNF263O14978 683 aa5.39□□□□□ -1.55
HMGB1P4-201ENST00000455362 CYP26A1O43174 497 aa5.39□□□□□ -1.55
HMGB1P4-201ENST00000455362 ZSCAN12O43309 604 aa5.39□□□□□ -1.55
HMGB1P4-201ENST00000455362 AKR1B10O60218 316 aa5.39□□□□□ -1.55
HMGB1P4-201ENST00000455362 TMEM63AO94886 807 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms