RNA–Protein interactions for RNA: ENST00000450251.5

USP53-202, Transcript of ubiquitin specific peptidase 53, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP53, Length 6,072 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-202ENST00000450251 CPNE1Q99829 537 aa2.23□□□□□ -2.05
USP53-202ENST00000450251 SPATA9Q9BWV2 254 aa2.23□□□□□ -2.05
USP53-202ENST00000450251 TRIM9Q9C026 710 aa2.23□□□□□ -2.05
USP53-202ENST00000450251 SEMA4AQ9H3S1 761 aa2.23□□□□□ -2.05
USP53-202ENST00000450251 UFSP2Q9NUQ7 469 aa2.23□□□□□ -2.05
USP53-202ENST00000450251 ACTR10Q9NZ32 417 aa2.23□□□□□ -2.05
USP53-202ENST00000450251 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP2.23□□□□□ -2.05
USP53-202ENST00000450251 ARHGAP20Q9P2F6 1191 aa2.23□□□□□ -2.05
USP53-202ENST00000450251 CORO2BQ9UQ03 480 aa2.23□□□□□ -2.05
USP53-202ENST00000450251 CHKBQ9Y259 395 aa2.23□□□□□ -2.05
USP53-202ENST00000450251 ZNF609O15014 1411 aa2.23□□□□□ -2.05
USP53-202ENST00000450251 ZNF335Q9H4Z2 1342 aaPredicted RBP2.23□□□□□ -2.05
USP53-202ENST00000450251 A0A1B0GVM2 712 aa2.23□□□□□ -2.05
USP53-202ENST00000450251 CAPN8A6NHC0 703 aa2.23□□□□□ -2.05
USP53-202ENST00000450251 HMX3A6NHT5 357 aa2.23□□□□□ -2.05
USP53-202ENST00000450251 ZNF263O14978 683 aa2.23□□□□□ -2.05
USP53-202ENST00000450251 CHADO15335 359 aa2.23□□□□□ -2.05
USP53-202ENST00000450251 KPNA6O60684 536 aa2.23□□□□□ -2.05
USP53-202ENST00000450251 TBX10O75333 385 aa2.23□□□□□ -2.05
USP53-202ENST00000450251 TADA2AO75478 443 aa2.23□□□□□ -2.05
USP53-202ENST00000450251 MTA2O94776 668 aa2.23□□□□□ -2.05
USP53-202ENST00000450251 SUPT7LO94864 414 aa2.23□□□□□ -2.05
USP53-202ENST00000450251 LYPLA2O95372 231 aa2.23□□□□□ -2.05
USP53-202ENST00000450251 ZDHHC11BP0C7U3 371 aa2.23□□□□□ -2.05
USP53-202ENST00000450251 CKBP12277 381 aa2.23□□□□□ -2.05
USP53-202ENST00000450251 HLA-EP13747 358 aa2.23□□□□□ -2.05
USP53-202ENST00000450251 COMTP21964 271 aa2.23□□□□□ -2.05
USP53-202ENST00000450251 PSMA3P25788 255 aa2.23□□□□□ -2.05
USP53-202ENST00000450251 CD6P30203 668 aa2.23□□□□□ -2.05
USP53-202ENST00000450251 MAGEA6P43360 314 aa2.23□□□□□ -2.05
USP53-202ENST00000450251 HK3P52790 923 aa2.23□□□□□ -2.05
USP53-202ENST00000450251 RPS6P62753 249 aaKnown RBP2.23□□□□□ -2.05
USP53-202ENST00000450251 DEFA6Q01524 100 aa2.23□□□□□ -2.05
USP53-202ENST00000450251 KLRC3Q07444 240 aa2.23□□□□□ -2.05
USP53-202ENST00000450251 LRRC74AQ0VAA2 488 aa2.23□□□□□ -2.05
USP53-202ENST00000450251 CDC20Q12834 499 aa2.23□□□□□ -2.05
USP53-202ENST00000450251 NCOA4Q13772 614 aa2.23□□□□□ -2.05
USP53-202ENST00000450251 GCKRQ14397 625 aa2.23□□□□□ -2.05
USP53-202ENST00000450251 ACAP1Q15027 740 aa2.23□□□□□ -2.05
USP53-202ENST00000450251 ACOX1Q15067 660 aa2.23□□□□□ -2.05
USP53-202ENST00000450251 MTHFSDQ2M296 383 aaKnown RBP2.23□□□□□ -2.05
USP53-202ENST00000450251 SPANXN3Q5MJ09 141 aa2.23□□□□□ -2.05
USP53-202ENST00000450251 STRIP1Q5VSL9 837 aa2.23□□□□□ -2.05
USP53-202ENST00000450251 ANGEL2Q5VTE6 544 aaKnown RBP2.23□□□□□ -2.05
USP53-202ENST00000450251 LPCAT4Q643R3 524 aa2.23□□□□□ -2.05
USP53-202ENST00000450251 ARSKQ6UWY0 536 aa2.23□□□□□ -2.05
USP53-202ENST00000450251 LMBR1LQ6UX01 489 aa2.23□□□□□ -2.05
USP53-202ENST00000450251 PAGE2Q7Z2X7 111 aa2.23□□□□□ -2.05
USP53-202ENST00000450251 ZNF605Q86T29 641 aa2.23□□□□□ -2.05
USP53-202ENST00000450251 HIPK1Q86Z02 1210 aa2.23□□□□□ -2.05
USP53-202ENST00000450251 SLC44A2Q8IWA5 706 aaPredicted RBP2.23□□□□□ -2.05
USP53-202ENST00000450251 PHC2Q8IXK0 858 aa2.23□□□□□ -2.05
USP53-202ENST00000450251 RBFAQ8N0V3 343 aa2.23□□□□□ -2.05
USP53-202ENST00000450251 CMTR1Q8N1G2 835 aaKnown RBP2.23□□□□□ -2.05
USP53-202ENST00000450251 TMEM199Q8N511 208 aa2.23□□□□□ -2.05
USP53-202ENST00000450251 DNAJB8Q8NHS0 232 aa2.23□□□□□ -2.05
USP53-202ENST00000450251 ZFP28Q8NHY6 868 aa2.23□□□□□ -2.05
USP53-202ENST00000450251 HDAC2Q92769 488 aaKnown RBP2.23□□□□□ -2.05
USP53-202ENST00000450251 RFT1Q96AA3 541 aa2.23□□□□□ -2.05
USP53-202ENST00000450251 ASB9Q96DX5 294 aa2.23□□□□□ -2.05
USP53-202ENST00000450251 DNAJC1Q96KC8 554 aaKnown RBP2.23□□□□□ -2.05
USP53-202ENST00000450251 TMEM246Q9BRR3 403 aa2.23□□□□□ -2.05
USP53-202ENST00000450251 ADI1Q9BV57 179 aa2.23□□□□□ -2.05
USP53-202ENST00000450251 MROQ9BYG7 248 aa2.23□□□□□ -2.05
USP53-202ENST00000450251 SLC13A1Q9BZW2 595 aa2.23□□□□□ -2.05
USP53-202ENST00000450251 SAV1Q9H4B6 383 aaPredicted RBP2.23□□□□□ -2.05
USP53-202ENST00000450251 KANSL2Q9H9L4 492 aa2.23□□□□□ -2.05
USP53-202ENST00000450251 GPN2Q9H9Y4 310 aaPredicted RBP2.23□□□□□ -2.05
USP53-202ENST00000450251 LY9Q9HBG7 655 aa2.23□□□□□ -2.05
USP53-202ENST00000450251 GPHNQ9NQX3 736 aaPredicted RBP2.23□□□□□ -2.05
USP53-202ENST00000450251 HPF1Q9NWY4 346 aa2.23□□□□□ -2.05
USP53-202ENST00000450251 MKS1Q9NXB0 559 aa2.23□□□□□ -2.05
USP53-202ENST00000450251 MTMR10Q9NXD2 777 aa2.23□□□□□ -2.05
USP53-202ENST00000450251 TMOD3Q9NYL9 352 aa2.23□□□□□ -2.05
USP53-202ENST00000450251 MAD2L2Q9UI95 211 aa2.23□□□□□ -2.05
USP53-202ENST00000450251 ACAD8Q9UKU7 415 aa2.23□□□□□ -2.05
USP53-202ENST00000450251 SSR3Q9UNL2 185 aa2.23□□□□□ -2.05
USP53-202ENST00000450251 ALG6Q9Y672 507 aa2.23□□□□□ -2.05
USP53-202ENST00000450251 TLL2Q9Y6L7 1015 aa2.23□□□□□ -2.05
USP53-202ENST00000450251 HSPE1-MOB4S4R3N1 261 aa2.23□□□□□ -2.05
USP53-202ENST00000450251 RIMS1Q86UR5 1692 aaKnown RBP2.23□□□□□ -2.05
USP53-202ENST00000450251 XRN1Q8IZH2 1706 aaKnown RBP2.23□□□□□ -2.05
USP53-202ENST00000450251 PIK3C2AO00443 1686 aa2.23□□□□□ -2.05
USP53-202ENST00000450251 CLTCQ00610 1675 aaKnown RBP2.23□□□□□ -2.05
USP53-202ENST00000450251 FAM208AQ9UK61 1670 aaKnown RBP2.23□□□□□ -2.05
USP53-202ENST00000450251 LOC102724428A0A0B4J2F2 783 aa2.23□□□□□ -2.05
USP53-202ENST00000450251 A0A1B0GVI7 797 aa2.23□□□□□ -2.05
USP53-202ENST00000450251 DHRS12A0PJE2 317 aa2.23□□□□□ -2.05
USP53-202ENST00000450251 NUDT19A8MXV4 375 aa2.23□□□□□ -2.05
USP53-202ENST00000450251 F8W031 263 aaPredicted RBP2.23□□□□□ -2.05
USP53-202ENST00000450251 PLOD2O00469 737 aa2.23□□□□□ -2.05
USP53-202ENST00000450251 ADAM10O14672 748 aa2.23□□□□□ -2.05
USP53-202ENST00000450251 RGS13O14921 159 aa2.23□□□□□ -2.05
USP53-202ENST00000450251 MYL12BO14950 172 aa2.23□□□□□ -2.05
USP53-202ENST00000450251 UBDO15205 165 aa2.23□□□□□ -2.05
USP53-202ENST00000450251 CLDN3O15551 220 aa2.23□□□□□ -2.05
USP53-202ENST00000450251 DHX15O43143 795 aaKnown RBP2.23□□□□□ -2.05
USP53-202ENST00000450251 UPK1BO75841 260 aa2.23□□□□□ -2.05
USP53-202ENST00000450251 ITGB1P05556 798 aa2.23□□□□□ -2.05
USP53-202ENST00000450251 RASA1P20936 1047 aa2.23□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms