RNA–Protein interactions for RNA: ENST00000450066.6

USP39-207, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2 BASIC

Gene USP39, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-207ENST00000450066 CCDC117Q8IWD4 279 aaPredicted RBP14.48□□□□□ -0.09
USP39-207ENST00000450066 SRRM1Q8IYB3 904 aaKnown RBP14.48□□□□□ -0.09
USP39-207ENST00000450066 BBS5Q8N3I7 341 aa14.48□□□□□ -0.09
USP39-207ENST00000450066 CARNMT1Q8N4J0 409 aa14.48□□□□□ -0.09
USP39-207ENST00000450066 TTC16Q8NEE8 873 aa14.48□□□□□ -0.09
USP39-207ENST00000450066 ARRDC2Q8TBH0 407 aa14.48□□□□□ -0.09
USP39-207ENST00000450066 TADA1Q96BN2 335 aa14.48□□□□□ -0.09
USP39-207ENST00000450066 FICDQ9BVA6 458 aa14.48□□□□□ -0.09
USP39-207ENST00000450066 PBX4Q9BYU1 374 aa14.48□□□□□ -0.09
USP39-207ENST00000450066 MUC3BQ9H195 1237 aa14.48□□□□□ -0.09
USP39-207ENST00000450066 UBA2Q9UBT2 640 aaPredicted RBP14.48□□□□□ -0.09
USP39-207ENST00000450066 ZMYM5Q9UJ78 669 aa14.48□□□□□ -0.09
USP39-207ENST00000450066 ZNF180Q9UJW8 692 aa14.48□□□□□ -0.09
USP39-207ENST00000450066 RPS6KL1Q9Y6S9 549 aa14.48□□□□□ -0.09
USP39-207ENST00000450066 CCDC195A0A1B0GUA6 201 aa14.47□□□□□ -0.09
USP39-207ENST00000450066 FAM237BA0A1B0GVD1 139 aa14.47□□□□□ -0.09
USP39-207ENST00000450066 CXorf49A8MYA2 514 aaPredicted RBP14.47□□□□□ -0.09
USP39-207ENST00000450066 FOXO6A8MYZ6 492 aa14.47□□□□□ -0.09
USP39-207ENST00000450066 USP1O94782 785 aa14.47□□□□□ -0.09
USP39-207ENST00000450066 CD86P42081 329 aa14.47□□□□□ -0.09
USP39-207ENST00000450066 FRG1Q14331 258 aaKnown RBP14.47□□□□□ -0.09
USP39-207ENST00000450066 FSCBQ5H9T9 825 aa14.47□□□□□ -0.09
USP39-207ENST00000450066 PRSS36Q5K4E3 855 aa14.47□□□□□ -0.09
USP39-207ENST00000450066 ALG1LQ6GMV1 187 aa14.47□□□□□ -0.09
USP39-207ENST00000450066 CTAGE3PQ8IX95 158 aa14.47□□□□□ -0.09
USP39-207ENST00000450066 PPM1NQ8N819 430 aa14.47□□□□□ -0.09
USP39-207ENST00000450066 TDRD5Q8NAT2 981 aaKnown RBP14.47□□□□□ -0.09
USP39-207ENST00000450066 SH3RF2Q8TEC5 729 aa14.47□□□□□ -0.09
USP39-207ENST00000450066 ZNF707Q96C28 371 aaPredicted RBP14.47□□□□□ -0.09
USP39-207ENST00000450066 ABHD8Q96I13 439 aa14.47□□□□□ -0.09
USP39-207ENST00000450066 PSKH2Q96QS6 385 aa14.47□□□□□ -0.09
USP39-207ENST00000450066 SELENOSQ9BQE4 189 aa14.47□□□□□ -0.09
USP39-207ENST00000450066 SMG9Q9H0W8 520 aaKnown RBP14.47□□□□□ -0.09
USP39-207ENST00000450066 ARNT2Q9HBZ2 717 aa14.47□□□□□ -0.09
USP39-207ENST00000450066 SMYD2Q9NRG4 433 aa14.47□□□□□ -0.09
USP39-207ENST00000450066 SEPT3Q9UH03 358 aa14.47□□□□□ -0.09
USP39-207ENST00000450066 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.46□□□□□ -0.09
USP39-207ENST00000450066 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.46□□□□□ -0.09
USP39-207ENST00000450066 CBX4O00257 560 aa14.46□□□□□ -0.09
USP39-207ENST00000450066 BRAFP15056 766 aa14.46□□□□□ -0.09
USP39-207ENST00000450066 TPH1P17752 444 aa14.46□□□□□ -0.09
USP39-207ENST00000450066 GNGT1P63211 74 aa14.46□□□□□ -0.09
USP39-207ENST00000450066 DSC2Q02487 901 aa14.46□□□□□ -0.09
USP39-207ENST00000450066 CDH18Q13634 790 aa14.46□□□□□ -0.09
USP39-207ENST00000450066 MPPE1Q53F39 396 aa14.46□□□□□ -0.09
USP39-207ENST00000450066 ZNF697Q5TEC3 545 aa14.46□□□□□ -0.09
USP39-207ENST00000450066 GRASPQ7Z6J2 395 aaPredicted RBP14.46□□□□□ -0.09
USP39-207ENST00000450066 ADGRD2Q7Z7M1 963 aa14.46□□□□□ -0.09
USP39-207ENST00000450066 DDI1Q8WTU0 396 aa14.46□□□□□ -0.09
USP39-207ENST00000450066 FEM1AQ9BSK4 669 aa14.46□□□□□ -0.09
USP39-207ENST00000450066 LMAN2LQ9H0V9 348 aa14.46□□□□□ -0.09
USP39-207ENST00000450066 TLE6Q9H808 572 aa14.46□□□□□ -0.09
USP39-207ENST00000450066 CERS4Q9HA82 394 aa14.46□□□□□ -0.09
USP39-207ENST00000450066 TDP1Q9NUW8 608 aa14.46□□□□□ -0.09
USP39-207ENST00000450066 ZKSCAN7Q9P0L1 754 aaPredicted RBP14.46□□□□□ -0.09
USP39-207ENST00000450066 SOX13Q9UN79 622 aa14.46□□□□□ -0.09
USP39-207ENST00000450066 CCL26Q9Y258 94 aa14.46□□□□□ -0.09
USP39-207ENST00000450066 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.46□□□□□ -0.09
USP39-207ENST00000450066 IQANK1A0A1B0GTG1 560 aa14.46□□□□□ -0.09
USP39-207ENST00000450066 ZNF197O14709 1029 aa14.46□□□□□ -0.09
USP39-207ENST00000450066 MUSKO15146 869 aa14.46□□□□□ -0.09
USP39-207ENST00000450066 ATP9BO43861 1147 aa14.46□□□□□ -0.09
USP39-207ENST00000450066 CREB1P16220 341 aa14.46□□□□□ -0.09
USP39-207ENST00000450066 GLDCP23378 1020 aa14.46□□□□□ -0.09
USP39-207ENST00000450066 ANKRD20A4Q4UJ75 823 aa14.46□□□□□ -0.09
USP39-207ENST00000450066 ARMC3Q5W041 872 aa14.46□□□□□ -0.09
USP39-207ENST00000450066 RNF43Q68DV7 783 aa14.46□□□□□ -0.09
USP39-207ENST00000450066 TTC19Q6DKK2 380 aaPredicted RBP14.46□□□□□ -0.09
USP39-207ENST00000450066 POTEHQ6S545 545 aa14.46□□□□□ -0.09
USP39-207ENST00000450066 MDM1Q8TC05 714 aa14.46□□□□□ -0.09
USP39-207ENST00000450066 MZB1Q8WU39 189 aa14.46□□□□□ -0.09
USP39-207ENST00000450066 USP13Q92995 863 aaPredicted RBP14.46□□□□□ -0.09
USP39-207ENST00000450066 CENPTQ96BT3 561 aa14.46□□□□□ -0.09
USP39-207ENST00000450066 SEMA3CQ99985 751 aa14.46□□□□□ -0.09
USP39-207ENST00000450066 MGME1Q9BQP7 344 aa14.46□□□□□ -0.09
USP39-207ENST00000450066 KIFC1Q9BW19 673 aa14.46□□□□□ -0.09
USP39-207ENST00000450066 TRABDQ9H4I3 376 aa14.46□□□□□ -0.09
USP39-207ENST00000450066 MSRAQ9UJ68 235 aa14.46□□□□□ -0.09
USP39-207ENST00000450066 OR51B4Q9Y5P0 310 aa14.46□□□□□ -0.09
USP39-207ENST00000450066 FAM169AQ9Y6X4 670 aa14.46□□□□□ -0.09
USP39-207ENST00000450066 DOCK6Q96HP0 2047 aa14.45□□□□□ -0.1
USP39-207ENST00000450066 TMEM120BA0PK00 339 aa14.45□□□□□ -0.1
USP39-207ENST00000450066 PAPLNO95428 1278 aa14.45□□□□□ -0.1
USP39-207ENST00000450066 NUMBP49757 651 aa14.45□□□□□ -0.1
USP39-207ENST00000450066 NTHL1P78549 312 aa14.45□□□□□ -0.1
USP39-207ENST00000450066 NAB1Q13506 487 aa14.45□□□□□ -0.1
USP39-207ENST00000450066 IHHQ14623 411 aa14.45□□□□□ -0.1
USP39-207ENST00000450066 RAB30Q15771 203 aa14.45□□□□□ -0.1
USP39-207ENST00000450066 PCSK7Q16549 785 aa14.45□□□□□ -0.1
USP39-207ENST00000450066 PCID2Q5JVF3 399 aa14.45□□□□□ -0.1
USP39-207ENST00000450066 MFN1Q8IWA4 741 aa14.45□□□□□ -0.1
USP39-207ENST00000450066 SERBP1Q8NC51 408 aaKnown RBP eCLIP14.45□□□□□ -0.1
USP39-207ENST00000450066 PTCD2Q8WV60 388 aaKnown RBP14.45□□□□□ -0.1
USP39-207ENST00000450066 CDKL2Q92772 493 aa14.45□□□□□ -0.1
USP39-207ENST00000450066 FCRL3Q96P31 734 aaPredicted RBP14.45□□□□□ -0.1
USP39-207ENST00000450066 CINPQ9BW66 212 aaPredicted RBP14.45□□□□□ -0.1
USP39-207ENST00000450066 PPANQ9NQ55 473 aaKnown RBP14.45□□□□□ -0.1
USP39-207ENST00000450066 CHRAC1Q9NRG0 131 aa14.45□□□□□ -0.1
USP39-207ENST00000450066 HELZP42694 1942 aaKnown RBP14.45□□□□□ -0.1
USP39-207ENST00000450066 NOTCH4Q99466 2003 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms