RNA–Protein interactions for RNA: ENST00000449954.1

LINC01961-201, Transcript of long intergenic non-protein coding RNA 1961, humanhuman

TSL 5 BASIC

Gene LINC01961, Length 745 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01961-201ENST00000449954 TRIM21P19474 475 aaKnown RBP8.11□□□□□ -1.11
LINC01961-201ENST00000449954 NR1D1P20393 614 aa8.11□□□□□ -1.11
LINC01961-201ENST00000449954 CSKP41240 450 aa8.11□□□□□ -1.11
LINC01961-201ENST00000449954 LEPRP48357 1165 aaKnown RBP8.11□□□□□ -1.11
LINC01961-201ENST00000449954 ZFP36L1Q07352 338 aaKnown RBP8.11□□□□□ -1.11
LINC01961-201ENST00000449954 CCDC15Q0P6D6 951 aa8.11□□□□□ -1.11
LINC01961-201ENST00000449954 TRIP4Q15650 581 aaPredicted RBP8.11□□□□□ -1.11
LINC01961-201ENST00000449954 TMEM119Q4V9L6 283 aa8.11□□□□□ -1.11
LINC01961-201ENST00000449954 ADGRF1Q5T601 910 aa8.11□□□□□ -1.11
LINC01961-201ENST00000449954 RNF219Q5W0B1 726 aaPredicted RBP8.11□□□□□ -1.11
LINC01961-201ENST00000449954 Q6ZSR6 202 aa8.11□□□□□ -1.11
LINC01961-201ENST00000449954 GPRIN1Q7Z2K8 1008 aa8.11□□□□□ -1.11
LINC01961-201ENST00000449954 TRAPPC11Q7Z392 1133 aa8.11□□□□□ -1.11
LINC01961-201ENST00000449954 TMPRSS9Q7Z410 1059 aa8.11□□□□□ -1.11
LINC01961-201ENST00000449954 SCD5Q86SK9 330 aa8.11□□□□□ -1.11
LINC01961-201ENST00000449954 MFN1Q8IWA4 741 aa8.11□□□□□ -1.11
LINC01961-201ENST00000449954 CACNA2D3Q8IZS8 1091 aa8.11□□□□□ -1.11
LINC01961-201ENST00000449954 ARHGAP18Q8N392 663 aa8.11□□□□□ -1.11
LINC01961-201ENST00000449954 SDR16C5Q8N3Y7 309 aa8.11□□□□□ -1.11
LINC01961-201ENST00000449954 ARL10Q8N8L6 244 aa8.11□□□□□ -1.11
LINC01961-201ENST00000449954 OR6C4Q8NGE1 309 aa8.11□□□□□ -1.11
LINC01961-201ENST00000449954 WFDC5Q8TCV5 224 aa8.11□□□□□ -1.11
LINC01961-201ENST00000449954 PDCD6IPQ8WUM4 868 aaKnown RBP8.11□□□□□ -1.11
LINC01961-201ENST00000449954 CCDC74AQ96AQ1 378 aa8.11□□□□□ -1.11
LINC01961-201ENST00000449954 KIAA1143Q96AT1 154 aaPredicted RBP8.11□□□□□ -1.11
LINC01961-201ENST00000449954 NOX5Q96PH1 765 aa8.11□□□□□ -1.11
LINC01961-201ENST00000449954 TM6SF1Q9BZW5 370 aa8.11□□□□□ -1.11
LINC01961-201ENST00000449954 FOXP1Q9H334 677 aaPredicted RBP8.11□□□□□ -1.11
LINC01961-201ENST00000449954 KLF15Q9UIH9 416 aa8.11□□□□□ -1.11
LINC01961-201ENST00000449954 GGT7Q9UJ14 662 aa8.11□□□□□ -1.11
LINC01961-201ENST00000449954 PCDHGA3Q9Y5H0 932 aa8.11□□□□□ -1.11
LINC01961-201ENST00000449954 GPC6Q9Y625 555 aaPredicted RBP8.11□□□□□ -1.11
LINC01961-201ENST00000449954 A0A1W2PQM1 296 aa8.1□□□□□ -1.11
LINC01961-201ENST00000449954 A0A1W2PQU0 124 aa8.1□□□□□ -1.11
LINC01961-201ENST00000449954 TYW5A2RUC4 315 aaKnown RBP8.1□□□□□ -1.11
LINC01961-201ENST00000449954 HHLA1C9JL84 531 aa8.1□□□□□ -1.11
LINC01961-201ENST00000449954 C1QTNF3-AMACRE9PGA6 284 aa8.1□□□□□ -1.11
LINC01961-201ENST00000449954 IRAK2O43187 625 aa8.1□□□□□ -1.11
LINC01961-201ENST00000449954 SLC26A4O43511 780 aa8.1□□□□□ -1.11
LINC01961-201ENST00000449954 MOCS3O95396 460 aa8.1□□□□□ -1.11
LINC01961-201ENST00000449954 ANXA6P08133 673 aa8.1□□□□□ -1.11
LINC01961-201ENST00000449954 CCDC130P13994 396 aa8.1□□□□□ -1.11
LINC01961-201ENST00000449954 HOXB4P17483 251 aaPredicted RBP8.1□□□□□ -1.11
LINC01961-201ENST00000449954 UGT1A3P35503 534 aa8.1□□□□□ -1.11
LINC01961-201ENST00000449954 NNMTP40261 264 aa8.1□□□□□ -1.11
LINC01961-201ENST00000449954 RABIFP47224 123 aa8.1□□□□□ -1.11
LINC01961-201ENST00000449954 CLDN2P57739 230 aa8.1□□□□□ -1.11
LINC01961-201ENST00000449954 CCL7P80098 99 aa8.1□□□□□ -1.11
LINC01961-201ENST00000449954 ECT2LQ008S8 904 aa8.1□□□□□ -1.11
LINC01961-201ENST00000449954 DPYDQ12882 1025 aa8.1□□□□□ -1.11
LINC01961-201ENST00000449954 ZNF284Q2VY69 593 aa8.1□□□□□ -1.11
LINC01961-201ENST00000449954 DEFB109BQ30KR1 87 aa8.1□□□□□ -1.11
LINC01961-201ENST00000449954 OR6B2Q6IFH4 312 aa8.1□□□□□ -1.11
LINC01961-201ENST00000449954 CLEC20AQ6ZU45 233 aa8.1□□□□□ -1.11
LINC01961-201ENST00000449954 ZNF720Q7Z2F6 126 aa8.1□□□□□ -1.11
LINC01961-201ENST00000449954 HORMAD1Q86X24 394 aa8.1□□□□□ -1.11
LINC01961-201ENST00000449954 MMP21Q8N119 569 aa8.1□□□□□ -1.11
LINC01961-201ENST00000449954 GPD1LQ8N335 351 aa8.1□□□□□ -1.11
LINC01961-201ENST00000449954 ZSWIM2Q8NEG5 633 aa8.1□□□□□ -1.11
LINC01961-201ENST00000449954 FIBINQ8TAL6 211 aa8.1□□□□□ -1.11
LINC01961-201ENST00000449954 SLC2A14Q8TDB8 520 aa8.1□□□□□ -1.11
LINC01961-201ENST00000449954 OR8D1Q8WZ84 308 aa8.1□□□□□ -1.11
LINC01961-201ENST00000449954 SYAP1Q96A49 352 aaPredicted RBP8.1□□□□□ -1.11
LINC01961-201ENST00000449954 CEP63Q96MT8 703 aa8.1□□□□□ -1.11
LINC01961-201ENST00000449954 ACCSQ96QU6 501 aa8.1□□□□□ -1.11
LINC01961-201ENST00000449954 IKZF4Q9H2S9 585 aa8.1□□□□□ -1.11
LINC01961-201ENST00000449954 LRRN3Q9H3W5 708 aa8.1□□□□□ -1.11
LINC01961-201ENST00000449954 CAAP1Q9H8G2 361 aa8.1□□□□□ -1.11
LINC01961-201ENST00000449954 GPN2Q9H9Y4 310 aaPredicted RBP8.1□□□□□ -1.11
LINC01961-201ENST00000449954 FZD3Q9NPG1 666 aa8.1□□□□□ -1.11
LINC01961-201ENST00000449954 PDRG1Q9NUG6 133 aa8.1□□□□□ -1.11
LINC01961-201ENST00000449954 APOBEC3BQ9UH17 382 aaKnown RBP8.1□□□□□ -1.11
LINC01961-201ENST00000449954 ERVW-1Q9UQF0 538 aa8.1□□□□□ -1.11
LINC01961-201ENST00000449954 KIF3AQ9Y496 699 aa8.1□□□□□ -1.11
LINC01961-201ENST00000449954 HS3ST3A1Q9Y663 406 aa8.1□□□□□ -1.11
LINC01961-201ENST00000449954 DOCK9Q9BZ29 2069 aa8.1□□□□□ -1.11
LINC01961-201ENST00000449954 GOLGA8IPA6NC78 632 aa8.09□□□□□ -1.11
LINC01961-201ENST00000449954 GOLGA8JA6NMD2 632 aa8.09□□□□□ -1.11
LINC01961-201ENST00000449954 TCP11X1B4DZS4 312 aa8.09□□□□□ -1.11
LINC01961-201ENST00000449954 ALOX15BO15296 676 aa8.09□□□□□ -1.11
LINC01961-201ENST00000449954 NKX2-8O15522 239 aa8.09□□□□□ -1.11
LINC01961-201ENST00000449954 DUX1O43812 170 aa8.09□□□□□ -1.11
LINC01961-201ENST00000449954 JAK2O60674 1132 aa8.09□□□□□ -1.11
LINC01961-201ENST00000449954 DTNBO60941 627 aa8.09□□□□□ -1.11
LINC01961-201ENST00000449954 SORBS2O94875 1100 aaKnown RBP8.09□□□□□ -1.11
LINC01961-201ENST00000449954 OAS2P29728 719 aaKnown RBP8.09□□□□□ -1.11
LINC01961-201ENST00000449954 ATICP31939 592 aa8.09□□□□□ -1.11
LINC01961-201ENST00000449954 KIF11P52732 1056 aa8.09□□□□□ -1.11
LINC01961-201ENST00000449954 METAP1P53582 386 aa8.09□□□□□ -1.11
LINC01961-201ENST00000449954 CNTN1Q12860 1018 aa8.09□□□□□ -1.11
LINC01961-201ENST00000449954 MRPL49Q13405 166 aaKnown RBP8.09□□□□□ -1.11
LINC01961-201ENST00000449954 TESK1Q15569 626 aa8.09□□□□□ -1.11
LINC01961-201ENST00000449954 L1TD1Q5T7N2 865 aaKnown RBP8.09□□□□□ -1.11
LINC01961-201ENST00000449954 CEP135Q66GS9 1140 aa8.09□□□□□ -1.11
LINC01961-201ENST00000449954 GDF7Q7Z4P5 450 aa8.09□□□□□ -1.11
LINC01961-201ENST00000449954 CCNJLQ8IV13 435 aa8.09□□□□□ -1.11
LINC01961-201ENST00000449954 CCDC117Q8IWD4 279 aaPredicted RBP8.09□□□□□ -1.11
LINC01961-201ENST00000449954 CCDC112Q8NEF3 446 aa8.09□□□□□ -1.11
LINC01961-201ENST00000449954 NOC3LQ8WTT2 800 aaKnown RBP8.09□□□□□ -1.11
LINC01961-201ENST00000449954 JAKMIP2Q96AA8 810 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms