RNA–Protein interactions for RNA: ENST00000449062.1

RTFDC1-204, Transcript of Protein RTF2 homolog, humanhuman

TSL 5

Gene RTFDC1, Length 852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-204ENST00000449062 CTSKP43235 329 aa14.33□□□□□ -0.12
RTFDC1-204ENST00000449062 MAPK8IP2Q13387 824 aaPredicted RBP14.33□□□□□ -0.12
RTFDC1-204ENST00000449062 PARP15Q460N3 678 aa14.33□□□□□ -0.12
RTFDC1-204ENST00000449062 INO80DQ53TQ3 878 aaPredicted RBP14.33□□□□□ -0.12
RTFDC1-204ENST00000449062 CCDC122Q5T0U0 273 aa14.33□□□□□ -0.12
RTFDC1-204ENST00000449062 TBC1D3GQ6DHY5 549 aa14.33□□□□□ -0.12
RTFDC1-204ENST00000449062 TBC1D3CQ6IPX1 549 aa14.33□□□□□ -0.12
RTFDC1-204ENST00000449062 LEKR1Q6ZMV7 388 aa14.33□□□□□ -0.12
RTFDC1-204ENST00000449062 VPS36Q86VN1 386 aa14.33□□□□□ -0.12
RTFDC1-204ENST00000449062 TRIM69Q86WT6 500 aa14.33□□□□□ -0.12
RTFDC1-204ENST00000449062 TBC1D3Q8IZP1 549 aaPredicted RBP14.33□□□□□ -0.12
RTFDC1-204ENST00000449062 NIPA2Q8N8Q9 360 aa14.33□□□□□ -0.12
RTFDC1-204ENST00000449062 RNF214Q8ND24 703 aa14.33□□□□□ -0.12
RTFDC1-204ENST00000449062 SNX19Q92543 992 aa14.33□□□□□ -0.12
RTFDC1-204ENST00000449062 HMCESQ96FZ2 354 aa14.33□□□□□ -0.12
RTFDC1-204ENST00000449062 NCAPGQ9BPX3 1015 aa14.33□□□□□ -0.12
RTFDC1-204ENST00000449062 HEPHQ9BQS7 1158 aa14.33□□□□□ -0.12
RTFDC1-204ENST00000449062 DHX35Q9H5Z1 703 aaKnown RBP14.33□□□□□ -0.12
RTFDC1-204ENST00000449062 CWC15Q9P013 229 aaKnown RBP14.33□□□□□ -0.12
RTFDC1-204ENST00000449062 IL36AQ9UHA7 158 aa14.33□□□□□ -0.12
RTFDC1-204ENST00000449062 TPX2Q9ULW0 747 aaKnown RBP14.33□□□□□ -0.12
RTFDC1-204ENST00000449062 FARP1Q9Y4F1 1045 aaPredicted RBP14.33□□□□□ -0.12
RTFDC1-204ENST00000449062 SNX11Q9Y5W9 270 aa14.33□□□□□ -0.12
RTFDC1-204ENST00000449062 ZSCAN5CA6NGD5 496 aaPredicted RBP14.32□□□□□ -0.12
RTFDC1-204ENST00000449062 KPNA3O00505 521 aaPredicted RBP14.32□□□□□ -0.12
RTFDC1-204ENST00000449062 VILLO15195 856 aa14.32□□□□□ -0.12
RTFDC1-204ENST00000449062 PRPSAP2O60256 369 aa14.32□□□□□ -0.12
RTFDC1-204ENST00000449062 GSRP00390 522 aa14.32□□□□□ -0.12
RTFDC1-204ENST00000449062 TPM3P06753 285 aa14.32□□□□□ -0.12
RTFDC1-204ENST00000449062 CCNHP51946 323 aaPredicted RBP14.32□□□□□ -0.12
RTFDC1-204ENST00000449062 NDST2P52849 883 aa14.32□□□□□ -0.12
RTFDC1-204ENST00000449062 ATXN3P54252 364 aaPredicted RBP14.32□□□□□ -0.12
RTFDC1-204ENST00000449062 GEMIN4P57678 1058 aaKnown RBP14.32□□□□□ -0.12
RTFDC1-204ENST00000449062 TBX2Q13207 712 aaPredicted RBP14.32□□□□□ -0.12
RTFDC1-204ENST00000449062 DPYSQ14117 519 aa14.32□□□□□ -0.12
RTFDC1-204ENST00000449062 CYTH1Q15438 398 aa14.32□□□□□ -0.12
RTFDC1-204ENST00000449062 MYLK3Q32MK0 819 aa14.32□□□□□ -0.12
RTFDC1-204ENST00000449062 BOLA3Q53S33 107 aa14.32□□□□□ -0.12
RTFDC1-204ENST00000449062 TXNRD3NBQ6F5E7 133 aa14.32□□□□□ -0.12
RTFDC1-204ENST00000449062 PSAPL1Q6NUJ1 521 aa14.32□□□□□ -0.12
RTFDC1-204ENST00000449062 NEK5Q6P3R8 708 aa14.32□□□□□ -0.12
RTFDC1-204ENST00000449062 RFX8Q6ZV50 586 aa14.32□□□□□ -0.12
RTFDC1-204ENST00000449062 ERN2Q76MJ5 926 aaKnown RBP14.32□□□□□ -0.12
RTFDC1-204ENST00000449062 ARHGAP12Q8IWW6 846 aa14.32□□□□□ -0.12
RTFDC1-204ENST00000449062 DEFB124Q8NES8 71 aa14.32□□□□□ -0.12
RTFDC1-204ENST00000449062 CCDC114Q96M63 670 aa14.32□□□□□ -0.12
RTFDC1-204ENST00000449062 SLC6A18Q96N87 628 aa14.32□□□□□ -0.12
RTFDC1-204ENST00000449062 SLC39A8Q9C0K1 460 aa14.32□□□□□ -0.12
RTFDC1-204ENST00000449062 GAREM1Q9H706 876 aa14.32□□□□□ -0.12
RTFDC1-204ENST00000449062 CATSPERBQ9H7T0 1116 aa14.32□□□□□ -0.12
RTFDC1-204ENST00000449062 PDFQ9HBH1 243 aa14.32□□□□□ -0.12
RTFDC1-204ENST00000449062 HECAQ9UBI9 543 aaPredicted RBP14.32□□□□□ -0.12
RTFDC1-204ENST00000449062 WASF3Q9UPY6 502 aa14.32□□□□□ -0.12
RTFDC1-204ENST00000449062 FNDC3AQ9Y2H6 1198 aaKnown RBP14.32□□□□□ -0.12
RTFDC1-204ENST00000449062 MFHAS1Q9Y4C4 1052 aa14.32□□□□□ -0.12
RTFDC1-204ENST00000449062 DOCK9Q9BZ29 2069 aa14.32□□□□□ -0.12
RTFDC1-204ENST00000449062 IGF2RP11717 2491 aa14.31□□□□□ -0.12
RTFDC1-204ENST00000449062 SSU72P8A0A1W2PR75 194 aa14.31□□□□□ -0.12
RTFDC1-204ENST00000449062 EEF2KO00418 725 aaKnown RBP14.31□□□□□ -0.12
RTFDC1-204ENST00000449062 KCNK3O14649 394 aa14.31□□□□□ -0.12
RTFDC1-204ENST00000449062 BUB1O43683 1085 aa14.31□□□□□ -0.12
RTFDC1-204ENST00000449062 CBFA2T3O75081 653 aa14.31□□□□□ -0.12
RTFDC1-204ENST00000449062 POP4O95707 220 aaKnown RBP14.31□□□□□ -0.12
RTFDC1-204ENST00000449062 RARAP10276 462 aa14.31□□□□□ -0.12
RTFDC1-204ENST00000449062 ERCC2P18074 760 aa14.31□□□□□ -0.12
RTFDC1-204ENST00000449062 IL4RP24394 825 aa14.31□□□□□ -0.12
RTFDC1-204ENST00000449062 PMLP29590 882 aa14.31□□□□□ -0.12
RTFDC1-204ENST00000449062 GKP32189 559 aa14.31□□□□□ -0.12
RTFDC1-204ENST00000449062 NOVA1P51513 510 aaKnown RBP14.31□□□□□ -0.12
RTFDC1-204ENST00000449062 DNA2P51530 1060 aa14.31□□□□□ -0.12
RTFDC1-204ENST00000449062 ZNF135P52742 658 aaPredicted RBP14.31□□□□□ -0.12
RTFDC1-204ENST00000449062 TPI1P60174 286 aa14.31□□□□□ -0.12
RTFDC1-204ENST00000449062 FAM193AP78312 1265 aa14.31□□□□□ -0.12
RTFDC1-204ENST00000449062 PIGHQ14442 188 aaPredicted RBP14.31□□□□□ -0.12
RTFDC1-204ENST00000449062 DPYSL2Q16555 572 aa14.31□□□□□ -0.12
RTFDC1-204ENST00000449062 SLC18A3Q16572 532 aa14.31□□□□□ -0.12
RTFDC1-204ENST00000449062 ZNF423Q2M1K9 1284 aa14.31□□□□□ -0.12
RTFDC1-204ENST00000449062 SARM1Q6SZW1 724 aa14.31□□□□□ -0.12
RTFDC1-204ENST00000449062 IL27RAQ6UWB1 636 aa14.31□□□□□ -0.12
RTFDC1-204ENST00000449062 LAYNQ6UX15 382 aa14.31□□□□□ -0.12
RTFDC1-204ENST00000449062 NETO2Q8NC67 525 aa14.31□□□□□ -0.12
RTFDC1-204ENST00000449062 OR2AP1Q8NGE2 309 aa14.31□□□□□ -0.12
RTFDC1-204ENST00000449062 FAM71BQ8TC56 605 aa14.31□□□□□ -0.12
RTFDC1-204ENST00000449062 CASKIN2Q8WXE0 1202 aa14.31□□□□□ -0.12
RTFDC1-204ENST00000449062 LRIG1Q96JA1 1093 aa14.31□□□□□ -0.12
RTFDC1-204ENST00000449062 BTBD6Q96KE9 485 aa14.31□□□□□ -0.12
RTFDC1-204ENST00000449062 CHP1Q99653 195 aa14.31□□□□□ -0.12
RTFDC1-204ENST00000449062 NUP85Q9BW27 656 aa14.31□□□□□ -0.12
RTFDC1-204ENST00000449062 PREBQ9HCU5 417 aa14.31□□□□□ -0.12
RTFDC1-204ENST00000449062 HPCAL4Q9UM19 191 aa14.31□□□□□ -0.12
RTFDC1-204ENST00000449062 MAP1BP46821 2468 aaKnown RBP14.31□□□□□ -0.12
RTFDC1-204ENST00000449062 KNTC1P50748 2209 aa14.3□□□□□ -0.12
RTFDC1-204ENST00000449062 ARID1BQ8NFD5 2236 aaPredicted RBP14.3□□□□□ -0.12
RTFDC1-204ENST00000449062 J3KR12 359 aa14.3□□□□□ -0.12
RTFDC1-204ENST00000449062 SH3BP5O60239 455 aa14.3□□□□□ -0.12
RTFDC1-204ENST00000449062 PRAMEF11O60813 436 aa14.3□□□□□ -0.12
RTFDC1-204ENST00000449062 TMCC1O94876 653 aa14.3□□□□□ -0.12
RTFDC1-204ENST00000449062 DESP17661 470 aa14.3□□□□□ -0.12
RTFDC1-204ENST00000449062 ITGB7P26010 798 aa14.3□□□□□ -0.12
RTFDC1-204ENST00000449062 CD38P28907 300 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms