RNA–Protein interactions for RNA: ENST00000448190.6

SNHG4-201, Transcript of small nucleolar RNA host gene 4, humanhuman

TSL 4

Gene SNHG4, Length 542 nt, Biotype processed transcript, Subcellular localisation Nucleoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG4-201ENST00000448190 GBE1Q04446 702 aa13.59□□□□□ -0.23
SNHG4-201ENST00000448190 ZNF33AQ06730 810 aa13.59□□□□□ -0.23
SNHG4-201ENST00000448190 SLC10A2Q12908 348 aaPredicted RBP13.59□□□□□ -0.23
SNHG4-201ENST00000448190 TTC31Q49AM3 519 aaPredicted RBP13.59□□□□□ -0.23
SNHG4-201ENST00000448190 INO80DQ53TQ3 878 aaPredicted RBP13.59□□□□□ -0.23
SNHG4-201ENST00000448190 FAM46CQ5VWP2 391 aa13.59□□□□□ -0.23
SNHG4-201ENST00000448190 KAZNQ674X7 775 aa13.59□□□□□ -0.23
SNHG4-201ENST00000448190 NCBP2-AS2Q69YL0 99 aa13.59□□□□□ -0.23
SNHG4-201ENST00000448190 NPNTQ6UXI9 565 aa13.59□□□□□ -0.23
SNHG4-201ENST00000448190 RFX6Q8HWS3 928 aa13.59□□□□□ -0.23
SNHG4-201ENST00000448190 KIAA2013Q8IYS2 634 aa13.59□□□□□ -0.23
SNHG4-201ENST00000448190 OR14C36Q8NHC7 312 aa13.59□□□□□ -0.23
SNHG4-201ENST00000448190 KIAA1524Q8TCG1 905 aa13.59□□□□□ -0.23
SNHG4-201ENST00000448190 ISG20Q96AZ6 181 aaKnown RBP13.59□□□□□ -0.23
SNHG4-201ENST00000448190 HSPA12BQ96MM6 686 aa13.59□□□□□ -0.23
SNHG4-201ENST00000448190 CEP44Q9C0F1 390 aa13.59□□□□□ -0.23
SNHG4-201ENST00000448190 BTBD1Q9H0C5 482 aa13.59□□□□□ -0.23
SNHG4-201ENST00000448190 PDFQ9HBH1 243 aa13.59□□□□□ -0.23
SNHG4-201ENST00000448190 TMEM74BQ9NUR3 256 aa13.59□□□□□ -0.23
SNHG4-201ENST00000448190 RCOR3Q9P2K3 495 aaPredicted RBP13.59□□□□□ -0.23
SNHG4-201ENST00000448190 HEY1Q9Y5J3 304 aa13.59□□□□□ -0.23
SNHG4-201ENST00000448190 WASF2Q9Y6W5 498 aa13.59□□□□□ -0.23
SNHG4-201ENST00000448190 ATXN2Q99700 1313 aaKnown RBP13.59□□□□□ -0.23
SNHG4-201ENST00000448190 MYO18AQ92614 2054 aaKnown RBP13.59□□□□□ -0.23
SNHG4-201ENST00000448190 PATE3B3GLJ2 98 aa13.58□□□□□ -0.24
SNHG4-201ENST00000448190 C1QTNF3-AMACRE9PGA6 284 aa13.58□□□□□ -0.24
SNHG4-201ENST00000448190 ARHGAP6O43182 974 aa13.58□□□□□ -0.24
SNHG4-201ENST00000448190 MAFKO60675 156 aa13.58□□□□□ -0.24
SNHG4-201ENST00000448190 GJB3O75712 270 aa13.58□□□□□ -0.24
SNHG4-201ENST00000448190 FSBPO95073 299 aa13.58□□□□□ -0.24
SNHG4-201ENST00000448190 POP4O95707 220 aaKnown RBP13.58□□□□□ -0.24
SNHG4-201ENST00000448190 SEMA4FO95754 770 aa13.58□□□□□ -0.24
SNHG4-201ENST00000448190 FTCDO95954 541 aa13.58□□□□□ -0.24
SNHG4-201ENST00000448190 IGLV3-19P01714 112 aa13.58□□□□□ -0.24
SNHG4-201ENST00000448190 DRD3P35462 400 aa13.58□□□□□ -0.24
SNHG4-201ENST00000448190 RGRP47804 291 aa13.58□□□□□ -0.24
SNHG4-201ENST00000448190 SNRPD1P62314 119 aaKnown RBP13.58□□□□□ -0.24
SNHG4-201ENST00000448190 CCZ1BP86790 482 aa13.58□□□□□ -0.24
SNHG4-201ENST00000448190 CCZ1P86791 482 aaPredicted RBP13.58□□□□□ -0.24
SNHG4-201ENST00000448190 IL10RBQ08334 325 aa13.58□□□□□ -0.24
SNHG4-201ENST00000448190 SLC10A7Q0GE19 358 aa13.58□□□□□ -0.24
SNHG4-201ENST00000448190 PAFAH1B3Q15102 231 aaKnown RBP13.58□□□□□ -0.24
SNHG4-201ENST00000448190 LYSMD4Q5XG99 296 aa13.58□□□□□ -0.24
SNHG4-201ENST00000448190 C11orf63Q6NUN7 778 aa13.58□□□□□ -0.24
SNHG4-201ENST00000448190 NCEH1Q6PIU2 408 aa13.58□□□□□ -0.24
SNHG4-201ENST00000448190 CYP2U1Q7Z449 544 aa13.58□□□□□ -0.24
SNHG4-201ENST00000448190 C11orf74Q86VG3 221 aa13.58□□□□□ -0.24
SNHG4-201ENST00000448190 RGL4Q8IZJ4 473 aa13.58□□□□□ -0.24
SNHG4-201ENST00000448190 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.58□□□□□ -0.244e-16■■□□□ 14.4
SNHG4-201ENST00000448190 TSEN2Q8NCE0 465 aaKnown RBP13.58□□□□□ -0.24
SNHG4-201ENST00000448190 TMIEQ8NEW7 156 aa13.58□□□□□ -0.24
SNHG4-201ENST00000448190 OR2AP1Q8NGE2 309 aa13.58□□□□□ -0.24
SNHG4-201ENST00000448190 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.58□□□□□ -0.24
SNHG4-201ENST00000448190 SNX19Q92543 992 aa13.58□□□□□ -0.24
SNHG4-201ENST00000448190 FAF2Q96CS3 445 aa13.58□□□□□ -0.24
SNHG4-201ENST00000448190 ZNF419Q96HQ0 510 aaPredicted RBP13.58□□□□□ -0.24
SNHG4-201ENST00000448190 ZNF670Q9BS34 389 aa13.58□□□□□ -0.24
SNHG4-201ENST00000448190 HEMGNQ9BXL5 484 aa13.58□□□□□ -0.24
SNHG4-201ENST00000448190 MIR1-1HGQ9H1L0 117 aa13.58□□□□□ -0.24
SNHG4-201ENST00000448190 PARD6AQ9NPB6 346 aa13.58□□□□□ -0.24
SNHG4-201ENST00000448190 DDX56Q9NY93 547 aaKnown RBP13.58□□□□□ -0.24
SNHG4-201ENST00000448190 SAE1Q9UBE0 346 aaPredicted RBP13.58□□□□□ -0.24
SNHG4-201ENST00000448190 LHX3Q9UBR4 397 aa13.58□□□□□ -0.24
SNHG4-201ENST00000448190 GUCA1BQ9UMX6 200 aa13.58□□□□□ -0.24
SNHG4-201ENST00000448190 SCML1Q9UN30 329 aa13.58□□□□□ -0.24
SNHG4-201ENST00000448190 TBC1D3DA0A087WVF3 549 aa13.57□□□□□ -0.24
SNHG4-201ENST00000448190 TBC1D3IA0A087WXS9 549 aa13.57□□□□□ -0.24
SNHG4-201ENST00000448190 TBC1D3EA0A087X179 549 aa13.57□□□□□ -0.24
SNHG4-201ENST00000448190 TBC1D3KA0A087X1G2 549 aa13.57□□□□□ -0.24
SNHG4-201ENST00000448190 BCLAF3A2AJT9 711 aaKnown RBP13.57□□□□□ -0.24
SNHG4-201ENST00000448190 TBC1D3FA6NER0 549 aaPredicted RBP13.57□□□□□ -0.24
SNHG4-201ENST00000448190 TBC1D3LB9A6J9 549 aa13.57□□□□□ -0.24
SNHG4-201ENST00000448190 MUSKO15146 869 aa13.57□□□□□ -0.24
SNHG4-201ENST00000448190 ALOX15BO15296 676 aa13.57□□□□□ -0.24
SNHG4-201ENST00000448190 EPN2O95208 641 aa13.57□□□□□ -0.24
SNHG4-201ENST00000448190 ZRANB2O95218 330 aaKnown RBP eCLIP13.57□□□□□ -0.24
SNHG4-201ENST00000448190 GSRP00390 522 aa13.57□□□□□ -0.24
SNHG4-201ENST00000448190 PRNPP04156 253 aa13.57□□□□□ -0.24
SNHG4-201ENST00000448190 UGT2B4P06133 528 aa13.57□□□□□ -0.24
SNHG4-201ENST00000448190 TBC1D3HP0C7X1 549 aa13.57□□□□□ -0.24
SNHG4-201ENST00000448190 SERPINB6P35237 376 aa13.57□□□□□ -0.24
SNHG4-201ENST00000448190 MPLP40238 635 aa13.57□□□□□ -0.24
SNHG4-201ENST00000448190 ADCY2Q08462 1091 aa13.57□□□□□ -0.24
SNHG4-201ENST00000448190 LBRQ14739 615 aaKnown RBP13.57□□□□□ -0.24
SNHG4-201ENST00000448190 SF3A2Q15428 464 aaKnown RBP13.57□□□□□ -0.24
SNHG4-201ENST00000448190 DCAF12L1Q5VU92 463 aa13.57□□□□□ -0.24
SNHG4-201ENST00000448190 TBC1D3GQ6DHY5 549 aa13.57□□□□□ -0.24
SNHG4-201ENST00000448190 TBC1D3CQ6IPX1 549 aa13.57□□□□□ -0.24
SNHG4-201ENST00000448190 TCEAL6Q6IPX3 200 aa13.57□□□□□ -0.24
SNHG4-201ENST00000448190 SPOCD1Q6ZMY3 1216 aa13.57□□□□□ -0.24
SNHG4-201ENST00000448190 USP30Q70CQ3 517 aa13.57□□□□□ -0.24
SNHG4-201ENST00000448190 CCDC50Q8IVM0 306 aa13.57□□□□□ -0.24
SNHG4-201ENST00000448190 RCOR2Q8IZ40 523 aa13.57□□□□□ -0.24
SNHG4-201ENST00000448190 TBC1D3Q8IZP1 549 aaPredicted RBP13.57□□□□□ -0.24
SNHG4-201ENST00000448190 ATPAF2Q8N5M1 289 aa13.57□□□□□ -0.24
SNHG4-201ENST00000448190 LRRC57Q8N9N7 239 aa13.57□□□□□ -0.24
SNHG4-201ENST00000448190 CCNYQ8ND76 341 aa13.57□□□□□ -0.24
SNHG4-201ENST00000448190 CCDC112Q8NEF3 446 aa13.57□□□□□ -0.24
SNHG4-201ENST00000448190 TCEAL3Q969E4 200 aa13.57□□□□□ -0.24
SNHG4-201ENST00000448190 VOPP1Q96AW1 172 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms