RNA–Protein interactions for RNA: ENST00000447654.5

HMGA1-205, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HMGA1, Length 2,159 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-205ENST00000447654 MAGEA6P43360 314 aa19.44■□□□□ 0.7
HMGA1-205ENST00000447654 JAK3P52333 1124 aa19.44■□□□□ 0.7
HMGA1-205ENST00000447654 MLLT10P55197 1068 aa19.44■□□□□ 0.7
HMGA1-205ENST00000447654 SP2Q02086 613 aa19.44■□□□□ 0.7
HMGA1-205ENST00000447654 TRIM32Q13049 653 aa19.44■□□□□ 0.7
HMGA1-205ENST00000447654 SLC9B1Q4ZJI4 515 aa19.44■□□□□ 0.7
HMGA1-205ENST00000447654 MROH9Q5TGP6 573 aa19.44■□□□□ 0.7
HMGA1-205ENST00000447654 HMBOX1Q6NT76 420 aa19.44■□□□□ 0.7
HMGA1-205ENST00000447654 ERMP1Q7Z2K6 904 aa19.44■□□□□ 0.7
HMGA1-205ENST00000447654 C10orf107Q8IVU9 208 aa19.44■□□□□ 0.7
HMGA1-205ENST00000447654 UNC45BQ8IWX7 931 aa19.44■□□□□ 0.7
HMGA1-205ENST00000447654 USP13Q92995 863 aaPredicted RBP19.44■□□□□ 0.7
HMGA1-205ENST00000447654 SLCO4A1Q96BD0 722 aa19.44■□□□□ 0.7
HMGA1-205ENST00000447654 GLT1D1Q96MS3 346 aa19.44■□□□□ 0.7
HMGA1-205ENST00000447654 SMYD2Q9NRG4 433 aa19.44■□□□□ 0.7
HMGA1-205ENST00000447654 GABBR1Q9UBS5 961 aa19.44■□□□□ 0.7
HMGA1-205ENST00000447654 CNOT6Q9ULM6 557 aaKnown RBP19.44■□□□□ 0.7
HMGA1-205ENST00000447654 ST14Q9Y5Y6 855 aa19.44■□□□□ 0.7
HMGA1-205ENST00000447654 SOCS2O14508 198 aa19.44■□□□□ 0.7
HMGA1-205ENST00000447654 CSPG5O95196 566 aa19.44■□□□□ 0.7
HMGA1-205ENST00000447654 FKBP9O95302 570 aa19.44■□□□□ 0.7
HMGA1-205ENST00000447654 ADRB2P07550 413 aa19.44■□□□□ 0.7
HMGA1-205ENST00000447654 GRIA3P42263 894 aa19.44■□□□□ 0.7
HMGA1-205ENST00000447654 SLC10A2Q12908 348 aaPredicted RBP19.44■□□□□ 0.7
HMGA1-205ENST00000447654 LRIT3Q3SXY7 679 aa19.44■□□□□ 0.7
HMGA1-205ENST00000447654 CCNYL2Q5T2Q4 361 aa19.44■□□□□ 0.7
HMGA1-205ENST00000447654 UNC5BQ8IZJ1 945 aa19.44■□□□□ 0.7
HMGA1-205ENST00000447654 TMEM161BQ8NDZ6 487 aa19.44■□□□□ 0.7
HMGA1-205ENST00000447654 MAELQ96JY0 434 aaKnown RBP19.44■□□□□ 0.7
HMGA1-205ENST00000447654 BTN2A3PQ96KV6 586 aa19.44■□□□□ 0.7
HMGA1-205ENST00000447654 MTG1Q9BT17 334 aaPredicted RBP19.44■□□□□ 0.7
HMGA1-205ENST00000447654 C9orf16Q9BUW7 83 aa19.44■□□□□ 0.7
HMGA1-205ENST00000447654 NOL11Q9H8H0 719 aaKnown RBP19.44■□□□□ 0.7
HMGA1-205ENST00000447654 FBXO8Q9NRD0 319 aa19.44■□□□□ 0.7
HMGA1-205ENST00000447654 PCDHGA3Q9Y5H0 932 aa19.44■□□□□ 0.7
HMGA1-205ENST00000447654 PCDHA10Q9Y5I2 948 aa19.44■□□□□ 0.7
HMGA1-205ENST00000447654 EVPLLA8MZ36 301 aa19.43■□□□□ 0.7
HMGA1-205ENST00000447654 APOC4-APOC2K7ER74 178 aa19.43■□□□□ 0.7
HMGA1-205ENST00000447654 DLGAP1O14490 977 aa19.43■□□□□ 0.7
HMGA1-205ENST00000447654 USP2O75604 605 aaPredicted RBP19.43■□□□□ 0.7
HMGA1-205ENST00000447654 APOC2P02655 101 aa19.43■□□□□ 0.7
HMGA1-205ENST00000447654 PRKACBP22694 351 aa19.43■□□□□ 0.7
HMGA1-205ENST00000447654 GRM5P41594 1212 aa19.43■□□□□ 0.7
HMGA1-205ENST00000447654 NPTX2P47972 431 aa19.43■□□□□ 0.7
HMGA1-205ENST00000447654 SNX17Q15036 470 aa19.43■□□□□ 0.7
HMGA1-205ENST00000447654 TREML2Q5T2D2 321 aa19.43■□□□□ 0.7
HMGA1-205ENST00000447654 GTF2IRD2BQ6EKJ0 949 aa19.43■□□□□ 0.7
HMGA1-205ENST00000447654 GTF2IRD2Q86UP8 949 aa19.43■□□□□ 0.7
HMGA1-205ENST00000447654 SNX18Q96RF0 628 aa19.43■□□□□ 0.7
HMGA1-205ENST00000447654 BEGAINQ9BUH8 593 aa19.43■□□□□ 0.7
HMGA1-205ENST00000447654 UNC93B1Q9H1C4 597 aa19.43■□□□□ 0.7
HMGA1-205ENST00000447654 NEK6Q9HC98 313 aa19.43■□□□□ 0.7
HMGA1-205ENST00000447654 FKBP14Q9NWM8 211 aa19.43■□□□□ 0.7
HMGA1-205ENST00000447654 RABL2AQ9UBK7 228 aaPredicted RBP19.43■□□□□ 0.7
HMGA1-205ENST00000447654 ENPP5Q9UJA9 477 aa19.43■□□□□ 0.7
HMGA1-205ENST00000447654 CST8O60676 142 aa19.43■□□□□ 0.7
HMGA1-205ENST00000447654 CALB1P05937 261 aa19.43■□□□□ 0.7
HMGA1-205ENST00000447654 KRT7P08729 469 aa19.43■□□□□ 0.7
HMGA1-205ENST00000447654 HSPA1AP0DMV8 641 aaKnown RBP19.43■□□□□ 0.7
HMGA1-205ENST00000447654 HSPA1BP0DMV9 641 aaKnown RBP19.43■□□□□ 0.7
HMGA1-205ENST00000447654 SFNP31947 248 aa19.43■□□□□ 0.7
HMGA1-205ENST00000447654 MSX2P35548 267 aaPredicted RBP19.43■□□□□ 0.7
HMGA1-205ENST00000447654 IST1P53990 364 aa19.43■□□□□ 0.7
HMGA1-205ENST00000447654 NAB1Q13506 487 aa19.43■□□□□ 0.7
HMGA1-205ENST00000447654 DLG2Q15700 870 aa19.43■□□□□ 0.7
HMGA1-205ENST00000447654 SWSAP1Q6NVH7 229 aa19.43■□□□□ 0.7
HMGA1-205ENST00000447654 FAM71DQ8N9W8 422 aa19.43■□□□□ 0.7
HMGA1-205ENST00000447654 PIK3C3Q8NEB9 887 aa19.43■□□□□ 0.7
HMGA1-205ENST00000447654 TAS1R2Q8TE23 839 aa19.43■□□□□ 0.7
HMGA1-205ENST00000447654 NSUN6Q8TEA1 469 aaKnown RBP19.43■□□□□ 0.7
HMGA1-205ENST00000447654 TTC9Q92623 222 aa19.43■□□□□ 0.7
HMGA1-205ENST00000447654 TRIM63Q969Q1 353 aa19.43■□□□□ 0.7
HMGA1-205ENST00000447654 TP53INP1Q96A56 240 aa19.43■□□□□ 0.7
HMGA1-205ENST00000447654 ZUFSPQ96AP4 578 aa19.43■□□□□ 0.7
HMGA1-205ENST00000447654 GPRASP2Q96D09 838 aa19.43■□□□□ 0.7
HMGA1-205ENST00000447654 TEX13BQ9BXU2 312 aa19.43■□□□□ 0.7
HMGA1-205ENST00000447654 R3HDMLQ9H3Y0 253 aa19.43■□□□□ 0.7
HMGA1-205ENST00000447654 ATP13A3Q9H7F0 1226 aa19.43■□□□□ 0.7
HMGA1-205ENST00000447654 C1orf112Q9NSG2 853 aa19.43■□□□□ 0.7
HMGA1-205ENST00000447654 PAK5Q9P286 719 aa19.43■□□□□ 0.7
HMGA1-205ENST00000447654 SARDHQ9UL12 918 aa19.43■□□□□ 0.7
HMGA1-205ENST00000447654 C19orf81C9J6K1 198 aa19.42■□□□□ 0.7
HMGA1-205ENST00000447654 HOXC11O43248 304 aaPredicted RBP19.42■□□□□ 0.7
HMGA1-205ENST00000447654 TCF4P15884 667 aa19.42■□□□□ 0.7
HMGA1-205ENST00000447654 PRKCAP17252 672 aa19.42■□□□□ 0.7
HMGA1-205ENST00000447654 NR4A1P22736 598 aa19.42■□□□□ 0.7
HMGA1-205ENST00000447654 HSPA14Q0VDF9 509 aa19.42■□□□□ 0.7
HMGA1-205ENST00000447654 SNRNP35Q16560 246 aaKnown RBP19.42■□□□□ 0.7
HMGA1-205ENST00000447654 ATG14Q6ZNE5 492 aa19.42■□□□□ 0.7
HMGA1-205ENST00000447654 CBWD2Q8IUF1 395 aa19.42■□□□□ 0.7
HMGA1-205ENST00000447654 SIX5Q8N196 739 aa19.42■□□□□ 0.7
HMGA1-205ENST00000447654 MCUQ8NE86 351 aa19.42■□□□□ 0.7
HMGA1-205ENST00000447654 ELMO3Q96BJ8 720 aa19.42■□□□□ 0.7
HMGA1-205ENST00000447654 FAM84AQ96KN4 292 aa19.42■□□□□ 0.7
HMGA1-205ENST00000447654 DHRS9Q9BPW9 319 aa19.42■□□□□ 0.7
HMGA1-205ENST00000447654 C12orf10Q9HB07 376 aa19.42■□□□□ 0.7
HMGA1-205ENST00000447654 PLAC1Q9HBJ0 212 aa19.42■□□□□ 0.7
HMGA1-205ENST00000447654 ZBTB26Q9HCK0 441 aa19.42■□□□□ 0.7
HMGA1-205ENST00000447654 RAD54BQ9Y620 910 aa19.42■□□□□ 0.7
HMGA1-205ENST00000447654 PHGDHO43175 533 aaKnown RBP19.42■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms