RNA–Protein interactions for RNA: ENST00000447601.6

FAM3A-215, Transcript of family with sequence similarity 3 member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FAM3A, Length 1,800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-215ENST00000447601 PPM1JQ5JR12 505 aa19.79■□□□□ 0.76
FAM3A-215ENST00000447601 SPOUT1Q5T280 376 aaKnown RBP19.79■□□□□ 0.76
FAM3A-215ENST00000447601 HECTD3Q5T447 861 aa19.79■□□□□ 0.76
FAM3A-215ENST00000447601 TPGS2Q68CL5 300 aa19.79■□□□□ 0.76
FAM3A-215ENST00000447601 CIR1Q86X95 450 aaPredicted RBP19.79■□□□□ 0.76
FAM3A-215ENST00000447601 CRLF3Q8IUI8 442 aa19.79■□□□□ 0.76
FAM3A-215ENST00000447601 LGI2Q8N0V4 545 aa19.79■□□□□ 0.76
FAM3A-215ENST00000447601 KLHL5Q96PQ7 755 aa19.79■□□□□ 0.76
FAM3A-215ENST00000447601 RHOJQ9H4E5 214 aa19.79■□□□□ 0.76
FAM3A-215ENST00000447601 THAP1Q9NVV9 213 aa19.79■□□□□ 0.76
FAM3A-215ENST00000447601 ZFP69BQ9UJL9 534 aa19.79■□□□□ 0.76
FAM3A-215ENST00000447601 TBX21Q9UL17 535 aa19.79■□□□□ 0.76
FAM3A-215ENST00000447601 CCDC78A2IDD5 438 aa19.78■□□□□ 0.76
FAM3A-215ENST00000447601 ZNF840PA6NDX5 716 aa19.78■□□□□ 0.76
FAM3A-215ENST00000447601 CD86P42081 329 aa19.78■□□□□ 0.76
FAM3A-215ENST00000447601 MNX1P50219 401 aaPredicted RBP19.78■□□□□ 0.76
FAM3A-215ENST00000447601 CDK18Q07002 472 aa19.78■□□□□ 0.76
FAM3A-215ENST00000447601 PCSK7Q16549 785 aa19.78■□□□□ 0.76
FAM3A-215ENST00000447601 CYB5D1Q6P9G0 228 aa19.78■□□□□ 0.76
FAM3A-215ENST00000447601 ASRGL1Q7L266 308 aa19.78■□□□□ 0.76
FAM3A-215ENST00000447601 ZNF461Q8TAF7 563 aa19.78■□□□□ 0.76
FAM3A-215ENST00000447601 ZNF558Q96NG5 402 aa19.78■□□□□ 0.76
FAM3A-215ENST00000447601 GPR22Q99680 433 aa19.78■□□□□ 0.76
FAM3A-215ENST00000447601 CLSTN3Q9BQT9 956 aa19.78■□□□□ 0.76
FAM3A-215ENST00000447601 BEGAINQ9BUH8 593 aa19.78■□□□□ 0.76
FAM3A-215ENST00000447601 KCNK13Q9HB14 408 aa19.78■□□□□ 0.76
FAM3A-215ENST00000447601 ATP13A1Q9HD20 1204 aa19.78■□□□□ 0.76
FAM3A-215ENST00000447601 KLC4Q9NSK0 619 aa19.78■□□□□ 0.76
FAM3A-215ENST00000447601 KCNK4Q9NYG8 393 aa19.78■□□□□ 0.76
FAM3A-215ENST00000447601 NUP205Q92621 2012 aa19.78■□□□□ 0.76
FAM3A-215ENST00000447601 TET1Q8NFU7 2136 aa19.78■□□□□ 0.76
FAM3A-215ENST00000447601 A0A096LPK6 155 aa19.77■□□□□ 0.76
FAM3A-215ENST00000447601 HEATR9A2RTY3 570 aa19.77■□□□□ 0.76
FAM3A-215ENST00000447601 ABLIM3O94929 683 aa19.77■□□□□ 0.76
FAM3A-215ENST00000447601 VAPBO95292 243 aa19.77■□□□□ 0.76
FAM3A-215ENST00000447601 NQO1P15559 274 aaKnown RBP19.77■□□□□ 0.76
FAM3A-215ENST00000447601 ARCN1P48444 511 aaKnown RBP19.77■□□□□ 0.76
FAM3A-215ENST00000447601 TMCO4Q5TGY1 634 aa19.77■□□□□ 0.76
FAM3A-215ENST00000447601 MBLAC2Q68D91 279 aa19.77■□□□□ 0.76
FAM3A-215ENST00000447601 KIAA0930Q6ICG6 404 aaPredicted RBP19.77■□□□□ 0.76
FAM3A-215ENST00000447601 ESRP1Q6NXG1 681 aaKnown RBP19.77■□□□□ 0.76
FAM3A-215ENST00000447601 KDELC2Q7Z4H8 507 aa19.77■□□□□ 0.76
FAM3A-215ENST00000447601 TBC1D1Q86TI0 1168 aaPredicted RBP19.77■□□□□ 0.76
FAM3A-215ENST00000447601 MTDHQ86UE4 582 aaKnown RBP19.77■□□□□ 0.76
FAM3A-215ENST00000447601 ZC3HC1Q86WB0 502 aaKnown RBP19.77■□□□□ 0.76
FAM3A-215ENST00000447601 PLD4Q96BZ4 506 aa19.77■□□□□ 0.76
FAM3A-215ENST00000447601 CRISPLD2Q9H0B8 497 aa19.77■□□□□ 0.76
FAM3A-215ENST00000447601 TREX1Q9NSU2 369 aa19.77■□□□□ 0.76
FAM3A-215ENST00000447601 TRPM5Q9NZQ8 1165 aa19.77■□□□□ 0.76
FAM3A-215ENST00000447601 SHROOM3Q8TF72 1996 aa19.77■□□□□ 0.76
FAM3A-215ENST00000447601 GOLGA8TH3BQL2 631 aa19.76■□□□□ 0.75
FAM3A-215ENST00000447601 PRAMEF11O60813 436 aa19.76■□□□□ 0.75
FAM3A-215ENST00000447601 DNAJC6O75061 913 aa19.76■□□□□ 0.75
FAM3A-215ENST00000447601 SEC24AO95486 1093 aa19.76■□□□□ 0.75
FAM3A-215ENST00000447601 CHRNA4P43681 627 aa19.76■□□□□ 0.75
FAM3A-215ENST00000447601 POLD2P49005 469 aa19.76■□□□□ 0.75
FAM3A-215ENST00000447601 MAXP61244 160 aa19.76■□□□□ 0.75
FAM3A-215ENST00000447601 DSG1Q02413 1049 aa19.76■□□□□ 0.75
FAM3A-215ENST00000447601 DSC2Q02487 901 aa19.76■□□□□ 0.75
FAM3A-215ENST00000447601 THOC5Q13769 683 aaKnown RBP19.76■□□□□ 0.75
FAM3A-215ENST00000447601 SEPT6Q14141 434 aa19.76■□□□□ 0.75
FAM3A-215ENST00000447601 LBRQ14739 615 aaKnown RBP19.76■□□□□ 0.75
FAM3A-215ENST00000447601 PCLAFQ15004 111 aa19.76■□□□□ 0.75
FAM3A-215ENST00000447601 TAF1BQ53T94 588 aaPredicted RBP19.76■□□□□ 0.75
FAM3A-215ENST00000447601 RABGAP1LQ5R372 815 aa19.76■□□□□ 0.75
FAM3A-215ENST00000447601 CES4AQ5XG92 561 aa19.76■□□□□ 0.75
FAM3A-215ENST00000447601 CLNKQ7Z7G1 428 aa19.76■□□□□ 0.75
FAM3A-215ENST00000447601 MYEOVQ96EZ4 313 aa19.76■□□□□ 0.75
FAM3A-215ENST00000447601 TMEM169Q96HH4 297 aa19.76■□□□□ 0.75
FAM3A-215ENST00000447601 ZNF599Q96NL3 588 aa19.76■□□□□ 0.75
FAM3A-215ENST00000447601 RANBP9Q96S59 729 aa19.76■□□□□ 0.75
FAM3A-215ENST00000447601 FAM167BQ9BTA0 163 aa19.76■□□□□ 0.75
FAM3A-215ENST00000447601 ATXN3LQ9H3M9 355 aa19.76■□□□□ 0.75
FAM3A-215ENST00000447601 ARHGEF3Q9NR81 526 aa19.76■□□□□ 0.75
FAM3A-215ENST00000447601 TMEM39AQ9NV64 488 aa19.76■□□□□ 0.75
FAM3A-215ENST00000447601 TMEM216Q9P0N5 145 aa19.76■□□□□ 0.75
FAM3A-215ENST00000447601 COPG2Q9UBF2 871 aa19.76■□□□□ 0.75
FAM3A-215ENST00000447601 HEY2Q9UBP5 337 aa19.76■□□□□ 0.75
FAM3A-215ENST00000447601 NYNRINQ9P2P1 1898 aaKnown RBP19.76■□□□□ 0.75
FAM3A-215ENST00000447601 SIN3BO75182 1162 aa19.76■□□□□ 0.75
FAM3A-215ENST00000447601 SERPINE1P05121 402 aa19.76■□□□□ 0.75
FAM3A-215ENST00000447601 PRKCGP05129 697 aa19.76■□□□□ 0.75
FAM3A-215ENST00000447601 C2P06681 752 aa19.76■□□□□ 0.75
FAM3A-215ENST00000447601 MYL2P10916 166 aa19.76■□□□□ 0.75
FAM3A-215ENST00000447601 HMGA1P17096 107 aaKnown RBP19.76■□□□□ 0.75
FAM3A-215ENST00000447601 GRK2P25098 689 aa19.76■□□□□ 0.75
FAM3A-215ENST00000447601 ALDH1A3P47895 512 aa19.76■□□□□ 0.75
FAM3A-215ENST00000447601 SERPINH1P50454 418 aaKnown RBP19.76■□□□□ 0.75
FAM3A-215ENST00000447601 GRM3Q14832 879 aa19.76■□□□□ 0.75
FAM3A-215ENST00000447601 CLEC14AQ86T13 490 aa19.76■□□□□ 0.75
FAM3A-215ENST00000447601 ARID3BQ8IVW6 561 aaPredicted RBP19.76■□□□□ 0.75
FAM3A-215ENST00000447601 GABPB2Q8TAK5 448 aaPredicted RBP19.76■□□□□ 0.75
FAM3A-215ENST00000447601 TOP1MTQ969P6 601 aa19.76■□□□□ 0.75
FAM3A-215ENST00000447601 TADA1Q96BN2 335 aa19.76■□□□□ 0.75
FAM3A-215ENST00000447601 MYRFLQ96LU7 910 aa19.76■□□□□ 0.75
FAM3A-215ENST00000447601 HERC2P3Q9BVR0 1158 aa19.76■□□□□ 0.75
FAM3A-215ENST00000447601 POLR1EQ9GZS1 481 aaKnown RBP19.76■□□□□ 0.75
FAM3A-215ENST00000447601 CAB39LQ9H9S4 337 aa19.76■□□□□ 0.75
FAM3A-215ENST00000447601 CYP4F11Q9HBI6 524 aa19.76■□□□□ 0.75
FAM3A-215ENST00000447601 SAR1AQ9NR31 198 aa19.76■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms