RNA–Protein interactions for RNA: ENST00000447345.5

RFC4-208, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 785 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-208ENST00000447345 NCBP2-AS2Q69YL0 99 aa12.13□□□□□ -0.47
RFC4-208ENST00000447345 DAAM2Q86T65 1068 aa12.13□□□□□ -0.47
RFC4-208ENST00000447345 SLC41A1Q8IVJ1 513 aa12.13□□□□□ -0.47
RFC4-208ENST00000447345 RHOT1Q8IXI2 618 aa12.13□□□□□ -0.47
RFC4-208ENST00000447345 KIAA2013Q8IYS2 634 aa12.13□□□□□ -0.47
RFC4-208ENST00000447345 ATPAF2Q8N5M1 289 aa12.13□□□□□ -0.47
RFC4-208ENST00000447345 TPCN2Q8NHX9 752 aa12.13□□□□□ -0.47
RFC4-208ENST00000447345 PCDH19Q8TAB3 1148 aa12.13□□□□□ -0.47
RFC4-208ENST00000447345 FAM71BQ8TC56 605 aa12.13□□□□□ -0.47
RFC4-208ENST00000447345 PIGKQ92643 395 aa12.13□□□□□ -0.47
RFC4-208ENST00000447345 RNF25Q96BH1 459 aaPredicted RBP12.13□□□□□ -0.47
RFC4-208ENST00000447345 ZNF670Q9BS34 389 aa12.13□□□□□ -0.47
RFC4-208ENST00000447345 BTBD1Q9H0C5 482 aa12.13□□□□□ -0.47
RFC4-208ENST00000447345 PDFQ9HBH1 243 aa12.13□□□□□ -0.47
RFC4-208ENST00000447345 PARD6AQ9NPB6 346 aa12.13□□□□□ -0.47
RFC4-208ENST00000447345 RCOR3Q9P2K3 495 aaPredicted RBP12.13□□□□□ -0.47
RFC4-208ENST00000447345 IL36AQ9UHA7 158 aa12.13□□□□□ -0.47
RFC4-208ENST00000447345 NCKAP1Q9Y2A7 1128 aa12.13□□□□□ -0.47
RFC4-208ENST00000447345 TRPM6Q9BX84 2022 aa12.12□□□□□ -0.47
RFC4-208ENST00000447345 KRIT1O00522 736 aa12.12□□□□□ -0.47
RFC4-208ENST00000447345 LEFTY1O75610 366 aa12.12□□□□□ -0.47
RFC4-208ENST00000447345 SEMA4FO95754 770 aa12.12□□□□□ -0.47
RFC4-208ENST00000447345 KDELR1P24390 212 aa12.12□□□□□ -0.47
RFC4-208ENST00000447345 MAOBP27338 520 aa12.12□□□□□ -0.47
RFC4-208ENST00000447345 HOXD11P31277 338 aaPredicted RBP12.12□□□□□ -0.47
RFC4-208ENST00000447345 SERPINB6P35237 376 aa12.12□□□□□ -0.47
RFC4-208ENST00000447345 DRD3P35462 400 aa12.12□□□□□ -0.47
RFC4-208ENST00000447345 CNTN1Q12860 1018 aa12.12□□□□□ -0.47
RFC4-208ENST00000447345 LLGL1Q15334 1064 aa12.12□□□□□ -0.47
RFC4-208ENST00000447345 FAM46CQ5VWP2 391 aa12.12□□□□□ -0.47
RFC4-208ENST00000447345 TCEAL6Q6IPX3 200 aa12.12□□□□□ -0.47
RFC4-208ENST00000447345 C11orf63Q6NUN7 778 aa12.12□□□□□ -0.47
RFC4-208ENST00000447345 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.12□□□□□ -0.47
RFC4-208ENST00000447345 USP30Q70CQ3 517 aa12.12□□□□□ -0.47
RFC4-208ENST00000447345 MAP7D3Q8IWC1 876 aa12.12□□□□□ -0.47
RFC4-208ENST00000447345 RGL4Q8IZJ4 473 aa12.12□□□□□ -0.47
RFC4-208ENST00000447345 LZTR1Q8N653 840 aa12.12□□□□□ -0.47
RFC4-208ENST00000447345 OR2AP1Q8NGE2 309 aa12.12□□□□□ -0.47
RFC4-208ENST00000447345 LRRN4Q8WUT4 740 aa12.12□□□□□ -0.47
RFC4-208ENST00000447345 TCEAL3Q969E4 200 aa12.12□□□□□ -0.47
RFC4-208ENST00000447345 ARRDC3Q96B67 414 aa12.12□□□□□ -0.47
RFC4-208ENST00000447345 LOXL4Q96JB6 756 aa12.12□□□□□ -0.47
RFC4-208ENST00000447345 GDAP1L1Q96MZ0 367 aa12.12□□□□□ -0.47
RFC4-208ENST00000447345 CINPQ9BW66 212 aaPredicted RBP12.12□□□□□ -0.47
RFC4-208ENST00000447345 NEUROG2Q9H2A3 272 aa12.12□□□□□ -0.47
RFC4-208ENST00000447345 C6orf106Q9H6K1 298 aaPredicted RBP12.12□□□□□ -0.47
RFC4-208ENST00000447345 HECAQ9UBI9 543 aaPredicted RBP12.12□□□□□ -0.47
RFC4-208ENST00000447345 LHX3Q9UBR4 397 aa12.12□□□□□ -0.47
RFC4-208ENST00000447345 IPO11Q9UI26 975 aaKnown RBP12.12□□□□□ -0.47
RFC4-208ENST00000447345 PPM1HQ9ULR3 514 aa12.12□□□□□ -0.47
RFC4-208ENST00000447345 SCML1Q9UN30 329 aa12.12□□□□□ -0.47
RFC4-208ENST00000447345 ALG6Q9Y672 507 aa12.12□□□□□ -0.47
RFC4-208ENST00000447345 WASF2Q9Y6W5 498 aa12.12□□□□□ -0.47
RFC4-208ENST00000447345 PTPRZ1P23471 2315 aaPredicted RBP12.12□□□□□ -0.47
RFC4-208ENST00000447345 LAMA1P25391 3075 aa12.11□□□□□ -0.47
RFC4-208ENST00000447345 PCDH15Q96QU1 1955 aa12.11□□□□□ -0.47
RFC4-208ENST00000447345 BCLAF3A2AJT9 711 aaKnown RBP12.11□□□□□ -0.47
RFC4-208ENST00000447345 PATE3B3GLJ2 98 aa12.11□□□□□ -0.47
RFC4-208ENST00000447345 PJA2O43164 708 aa12.11□□□□□ -0.47
RFC4-208ENST00000447345 PSTPIP1O43586 416 aa12.11□□□□□ -0.47
RFC4-208ENST00000447345 PALMO75781 387 aa12.11□□□□□ -0.47
RFC4-208ENST00000447345 FSBPO95073 299 aa12.11□□□□□ -0.47
RFC4-208ENST00000447345 IGSF6O95976 241 aa12.11□□□□□ -0.47
RFC4-208ENST00000447345 GSRP00390 522 aa12.11□□□□□ -0.47
RFC4-208ENST00000447345 PRNPP04156 253 aa12.11□□□□□ -0.47
RFC4-208ENST00000447345 ADPRHP54922 357 aa12.11□□□□□ -0.47
RFC4-208ENST00000447345 SNRPD1P62314 119 aaKnown RBP12.11□□□□□ -0.47
RFC4-208ENST00000447345 DYNLT1P63172 113 aa12.11□□□□□ -0.47
RFC4-208ENST00000447345 GBE1Q04446 702 aa12.11□□□□□ -0.47
RFC4-208ENST00000447345 IL10RBQ08334 325 aa12.11□□□□□ -0.47
RFC4-208ENST00000447345 KIF5AQ12840 1032 aa12.11□□□□□ -0.47
RFC4-208ENST00000447345 SF3A2Q15428 464 aaKnown RBP12.11□□□□□ -0.47
RFC4-208ENST00000447345 CYTH1Q15438 398 aa12.11□□□□□ -0.47
RFC4-208ENST00000447345 DCAF12L1Q5VU92 463 aa12.11□□□□□ -0.47
RFC4-208ENST00000447345 RFX6Q8HWS3 928 aa12.11□□□□□ -0.47
RFC4-208ENST00000447345 CCDC50Q8IVM0 306 aa12.11□□□□□ -0.47
RFC4-208ENST00000447345 PQLC3Q8N755 202 aa12.11□□□□□ -0.47
RFC4-208ENST00000447345 CCDC112Q8NEF3 446 aa12.11□□□□□ -0.47
RFC4-208ENST00000447345 OR14C36Q8NHC7 312 aa12.11□□□□□ -0.47
RFC4-208ENST00000447345 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.11□□□□□ -0.47
RFC4-208ENST00000447345 KRT35Q92764 455 aa12.11□□□□□ -0.47
RFC4-208ENST00000447345 ISG20Q96AZ6 181 aaKnown RBP12.11□□□□□ -0.47
RFC4-208ENST00000447345 FAF2Q96CS3 445 aa12.11□□□□□ -0.47
RFC4-208ENST00000447345 HEPHQ9BQS7 1158 aa12.11□□□□□ -0.47
RFC4-208ENST00000447345 MIR1-1HGQ9H1L0 117 aa12.11□□□□□ -0.47
RFC4-208ENST00000447345 DYRK4Q9NR20 520 aa12.11□□□□□ -0.47
RFC4-208ENST00000447345 SEMA4GQ9NTN9 838 aa12.11□□□□□ -0.47
RFC4-208ENST00000447345 TMEM74BQ9NUR3 256 aa12.11□□□□□ -0.47
RFC4-208ENST00000447345 DDX56Q9NY93 547 aaKnown RBP12.11□□□□□ -0.47
RFC4-208ENST00000447345 EVLQ9UI08 416 aaPredicted RBP12.11□□□□□ -0.47
RFC4-208ENST00000447345 FZD4Q9ULV1 537 aa12.11□□□□□ -0.47
RFC4-208ENST00000447345 CXorf51AA0A1B0GTR3 108 aa12.1□□□□□ -0.47
RFC4-208ENST00000447345 GRID2IPA4D2P6 1211 aa12.1□□□□□ -0.47
RFC4-208ENST00000447345 C3orf70A6NLC5 250 aaPredicted RBP12.1□□□□□ -0.47
RFC4-208ENST00000447345 INSIG1O15503 277 aa12.1□□□□□ -0.47
RFC4-208ENST00000447345 ARHGAP6O43182 974 aa12.1□□□□□ -0.47
RFC4-208ENST00000447345 GJB3O75712 270 aa12.1□□□□□ -0.47
RFC4-208ENST00000447345 CFIP05156 583 aa12.1□□□□□ -0.47
RFC4-208ENST00000447345 UGT2B4P06133 528 aa12.1□□□□□ -0.47
RFC4-208ENST00000447345 C7P10643 843 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms