RNA–Protein interactions for RNA: ENST00000446877.5

PMS1-214, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 4

Gene PMS1, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-214ENST00000446877 PTK2Q05397 1052 aa24.88■■□□□ 1.57
PMS1-214ENST00000446877 RETSATQ6NUM9 610 aa24.88■■□□□ 1.57
PMS1-214ENST00000446877 EFL1Q7Z2Z2 1120 aaKnown RBP24.88■■□□□ 1.57
PMS1-214ENST00000446877 TFAP2DQ7Z6R9 452 aa24.88■■□□□ 1.57
PMS1-214ENST00000446877 ELOA2Q8IYF1 753 aaPredicted RBP24.88■■□□□ 1.57
PMS1-214ENST00000446877 C1orf131Q8NDD1 294 aaKnown RBP24.88■■□□□ 1.57
PMS1-214ENST00000446877 PIGVQ9NUD9 493 aa24.88■■□□□ 1.57
PMS1-214ENST00000446877 ARHGEF38Q9NXL2 777 aa24.88■■□□□ 1.57
PMS1-214ENST00000446877 STAP1Q9ULZ2 295 aa24.88■■□□□ 1.57
PMS1-214ENST00000446877 NYNRINQ9P2P1 1898 aaKnown RBP24.87■■□□□ 1.57
PMS1-214ENST00000446877 POM121BA6NF01 834 aa24.87■■□□□ 1.57
PMS1-214ENST00000446877 DRGXA6NNA5 263 aa24.87■■□□□ 1.57
PMS1-214ENST00000446877 RNF103O00237 685 aa24.87■■□□□ 1.57
PMS1-214ENST00000446877 FPGTO14772 594 aa24.87■■□□□ 1.57
PMS1-214ENST00000446877 ERBB2P04626 1255 aa24.87■■□□□ 1.57
PMS1-214ENST00000446877 ADRB3P13945 408 aa24.87■■□□□ 1.57
PMS1-214ENST00000446877 TGM2P21980 687 aa24.87■■□□□ 1.57
PMS1-214ENST00000446877 CXCR3P49682 368 aa24.87■■□□□ 1.57
PMS1-214ENST00000446877 RNASE9P60153 205 aaKnown RBP24.87■■□□□ 1.57
PMS1-214ENST00000446877 SLC20A2Q08357 652 aa24.87■■□□□ 1.57
PMS1-214ENST00000446877 PAK1Q13153 545 aa24.87■■□□□ 1.57
PMS1-214ENST00000446877 ACBD5Q5T8D3 534 aaPredicted RBP24.87■■□□□ 1.57
PMS1-214ENST00000446877 TRIM65Q6PJ69 517 aa24.87■■□□□ 1.57
PMS1-214ENST00000446877 IGF2-ASQ6U949 168 aa24.87■■□□□ 1.57
PMS1-214ENST00000446877 ZSCAN30Q86W11 494 aa24.87■■□□□ 1.57
PMS1-214ENST00000446877 CREBRFQ8IUR6 639 aa24.87■■□□□ 1.57
PMS1-214ENST00000446877 SLC46A1Q96NT5 459 aa24.87■■□□□ 1.57
PMS1-214ENST00000446877 IL12RB2Q99665 862 aa24.87■■□□□ 1.57
PMS1-214ENST00000446877 GPR27Q9NS67 375 aa24.87■■□□□ 1.57
PMS1-214ENST00000446877 TMEM51Q9NW97 253 aa24.87■■□□□ 1.57
PMS1-214ENST00000446877 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP24.87■■□□□ 1.57
PMS1-214ENST00000446877 FADS3Q9Y5Q0 445 aa24.87■■□□□ 1.57
PMS1-214ENST00000446877 SNX10Q9Y5X0 201 aa24.87■■□□□ 1.57
PMS1-214ENST00000446877 AQP9O43315 295 aa24.86■■□□□ 1.57
PMS1-214ENST00000446877 LZTS3O60299 673 aaPredicted RBP24.86■■□□□ 1.57
PMS1-214ENST00000446877 F9P00740 461 aa24.86■■□□□ 1.57
PMS1-214ENST00000446877 JUNDP17535 347 aa24.86■■□□□ 1.57
PMS1-214ENST00000446877 BMP6P22004 513 aa24.86■■□□□ 1.57
PMS1-214ENST00000446877 ITGB7P26010 798 aa24.86■■□□□ 1.57
PMS1-214ENST00000446877 L1CAMP32004 1257 aa24.86■■□□□ 1.57
PMS1-214ENST00000446877 LY6DQ14210 128 aa24.86■■□□□ 1.57
PMS1-214ENST00000446877 RBM44Q6ZP01 1051 aaKnown RBP24.86■■□□□ 1.57
PMS1-214ENST00000446877 ZDHHC17Q8IUH5 632 aa24.86■■□□□ 1.57
PMS1-214ENST00000446877 ZNF397Q8NF99 534 aaPredicted RBP24.86■■□□□ 1.57
PMS1-214ENST00000446877 LMX1AQ8TE12 382 aa24.86■■□□□ 1.57
PMS1-214ENST00000446877 GLMNQ92990 594 aa24.86■■□□□ 1.57
PMS1-214ENST00000446877 ATXN7L3BQ96GX2 97 aa24.86■■□□□ 1.57
PMS1-214ENST00000446877 C1orf74Q96LT6 269 aa24.86■■□□□ 1.57
PMS1-214ENST00000446877 NPY6RQ99463 290 aa24.86■■□□□ 1.57
PMS1-214ENST00000446877 HEPHQ9BQS7 1158 aa24.86■■□□□ 1.57
PMS1-214ENST00000446877 CEP44Q9C0F1 390 aa24.86■■□□□ 1.57
PMS1-214ENST00000446877 MPP6Q9NZW5 540 aa24.86■■□□□ 1.57
PMS1-214ENST00000446877 APEX2Q9UBZ4 518 aa24.86■■□□□ 1.57
PMS1-214ENST00000446877 SALL4Q9UJQ4 1053 aa24.86■■□□□ 1.57
PMS1-214ENST00000446877 WASF2Q9Y6W5 498 aa24.86■■□□□ 1.57
PMS1-214ENST00000446877 B8ZZF3 427 aa24.85■■□□□ 1.57
PMS1-214ENST00000446877 BIN1O00499 593 aa24.85■■□□□ 1.57
PMS1-214ENST00000446877 C6P13671 934 aa24.85■■□□□ 1.57
PMS1-214ENST00000446877 SLC9A1P19634 815 aa24.85■■□□□ 1.57
PMS1-214ENST00000446877 RPIAP49247 311 aa24.85■■□□□ 1.57
PMS1-214ENST00000446877 SULT1E1P49888 294 aa24.85■■□□□ 1.57
PMS1-214ENST00000446877 DEUP1Q05D60 604 aa24.85■■□□□ 1.57
PMS1-214ENST00000446877 PDE1CQ14123 709 aaPredicted RBP24.85■■□□□ 1.57
PMS1-214ENST00000446877 MORC3Q14149 939 aa24.85■■□□□ 1.57
PMS1-214ENST00000446877 FGL2Q14314 439 aa24.85■■□□□ 1.57
PMS1-214ENST00000446877 NR0B2Q15466 257 aa24.85■■□□□ 1.57
PMS1-214ENST00000446877 CARD16Q5EG05 197 aa24.85■■□□□ 1.57
PMS1-214ENST00000446877 GUSBP11Q6P575 273 aa24.85■■□□□ 1.57
PMS1-214ENST00000446877 GBP6Q6ZN66 633 aa24.85■■□□□ 1.57
PMS1-214ENST00000446877 ZNF683Q8IZ20 524 aa24.85■■□□□ 1.57
PMS1-214ENST00000446877 PCDH20Q8N6Y1 951 aaKnown RBP24.85■■□□□ 1.57
PMS1-214ENST00000446877 OR7D4Q8NG98 312 aa24.85■■□□□ 1.57
PMS1-214ENST00000446877 SNRNP27Q8WVK2 155 aaKnown RBP24.85■■□□□ 1.57
PMS1-214ENST00000446877 ANLNQ9NQW6 1124 aa24.85■■□□□ 1.57
PMS1-214ENST00000446877 PCDHGA8Q9Y5G5 932 aa24.85■■□□□ 1.57
PMS1-214ENST00000446877 DOCK9Q9BZ29 2069 aa24.85■■□□□ 1.57
PMS1-214ENST00000446877 ILVBLA1L0T0 632 aa24.84■■□□□ 1.57
PMS1-214ENST00000446877 EME2A4GXA9 379 aaPredicted RBP24.84■■□□□ 1.57
PMS1-214ENST00000446877 NEMP1O14524 444 aa24.84■■□□□ 1.57
PMS1-214ENST00000446877 TPP1O14773 563 aa24.84■■□□□ 1.57
PMS1-214ENST00000446877 RAD51BO15315 384 aa24.84■■□□□ 1.57
PMS1-214ENST00000446877 AP1G1O43747 822 aa24.84■■□□□ 1.57
PMS1-214ENST00000446877 SRGAP2O75044 1071 aa24.84■■□□□ 1.57
PMS1-214ENST00000446877 DEFB133Q30KQ1 61 aa24.84■■□□□ 1.57
PMS1-214ENST00000446877 PTPN20Q4JDL3 420 aa24.84■■□□□ 1.57
PMS1-214ENST00000446877 FOXR1Q6PIV2 292 aa24.84■■□□□ 1.57
PMS1-214ENST00000446877 ZNF783Q6ZMS7 281 aa24.84■■□□□ 1.57
PMS1-214ENST00000446877 ARL14Q8N4G2 192 aa24.84■■□□□ 1.57
PMS1-214ENST00000446877 BTN2A2Q8WVV5 523 aa24.84■■□□□ 1.57
PMS1-214ENST00000446877 SHC3Q92529 594 aa24.84■■□□□ 1.57
PMS1-214ENST00000446877 TTC9Q92623 222 aa24.84■■□□□ 1.57
PMS1-214ENST00000446877 LENG8Q96PV6 779 aaPredicted RBP24.84■■□□□ 1.57
PMS1-214ENST00000446877 SEMA4CQ9C0C4 833 aa24.84■■□□□ 1.57
PMS1-214ENST00000446877 ATP13A1Q9HD20 1204 aa24.84■■□□□ 1.57
PMS1-214ENST00000446877 TSPAN6O43657 245 aa24.83■■□□□ 1.57
PMS1-214ENST00000446877 ZNF821O75541 412 aaPredicted RBP24.83■■□□□ 1.57
PMS1-214ENST00000446877 SERPINH1P50454 418 aaKnown RBP24.83■■□□□ 1.57
PMS1-214ENST00000446877 OTUD1Q5VV17 481 aaPredicted RBP24.83■■□□□ 1.57
PMS1-214ENST00000446877 PGAP3Q96FM1 320 aaPredicted RBP24.83■■□□□ 1.57
PMS1-214ENST00000446877 MED8Q96G25 268 aa24.83■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms