RNA–Protein interactions for RNA: ENST00000446231.6

SMG1-202, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG1, Length 16,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-202ENST00000446231 C2orf40Q9H1Z8 148 aa7.96□□□□□ -1.13
SMG1-202ENST00000446231 hCG_1818297A0A087WSY0 165 aa7.96□□□□□ -1.13
SMG1-202ENST00000446231 MAFGO15525 162 aa7.96□□□□□ -1.13
SMG1-202ENST00000446231 RFTN1Q14699 578 aaPredicted RBP7.96□□□□□ -1.13
SMG1-202ENST00000446231 HERC2P3Q9BVR0 1158 aa7.96□□□□□ -1.13
SMG1-202ENST00000446231 TP63Q9H3D4 680 aaPredicted RBP7.96□□□□□ -1.13
SMG1-202ENST00000446231 KIAA1257Q9ULG3 409 aa7.96□□□□□ -1.13
SMG1-202ENST00000446231 PCDHB12Q9Y5F1 795 aa7.96□□□□□ -1.13
SMG1-202ENST00000446231 MAP3K4Q9Y6R4 1608 aa7.96□□□□□ -1.13
SMG1-202ENST00000446231 PLIN3O60664 434 aa7.96□□□□□ -1.13
SMG1-202ENST00000446231 SLC2A4P14672 509 aa7.96□□□□□ -1.13
SMG1-202ENST00000446231 GLDCP23378 1020 aa7.96□□□□□ -1.13
SMG1-202ENST00000446231 PRIM2P49643 509 aa7.96□□□□□ -1.13
SMG1-202ENST00000446231 SPIRE1Q08AE8 756 aa7.96□□□□□ -1.13
SMG1-202ENST00000446231 UNC5BQ8IZJ1 945 aa7.96□□□□□ -1.13
SMG1-202ENST00000446231 RBM4BQ9BQ04 359 aaKnown RBP7.96□□□□□ -1.13
SMG1-202ENST00000446231 ACAT2Q9BWD1 397 aa7.96□□□□□ -1.13
SMG1-202ENST00000446231 RBM4Q9BWF3 364 aaKnown RBP7.96□□□□□ -1.13
SMG1-202ENST00000446231 ERGIC3Q9Y282 383 aa7.96□□□□□ -1.13
SMG1-202ENST00000446231 SLITRK3O94933 977 aa7.96□□□□□ -1.13
SMG1-202ENST00000446231 ARP10275 920 aa7.96□□□□□ -1.13
SMG1-202ENST00000446231 PLK1P53350 603 aa7.96□□□□□ -1.13
SMG1-202ENST00000446231 LDHDQ86WU2 507 aa7.96□□□□□ -1.13
SMG1-202ENST00000446231 FICDQ9BVA6 458 aa7.96□□□□□ -1.13
SMG1-202ENST00000446231 AURKAO14965 403 aa7.96□□□□□ -1.14
SMG1-202ENST00000446231 FYNP06241 537 aa7.96□□□□□ -1.14
SMG1-202ENST00000446231 TGFBIQ15582 683 aa7.96□□□□□ -1.14
SMG1-202ENST00000446231 WDR45BQ5MNZ6 344 aa7.96□□□□□ -1.14
SMG1-202ENST00000446231 ZNF606Q8WXB4 792 aa7.96□□□□□ -1.14
SMG1-202ENST00000446231 RMND5AQ9H871 391 aa7.96□□□□□ -1.14
SMG1-202ENST00000446231 REEP1Q9H902 201 aa7.96□□□□□ -1.14
SMG1-202ENST00000446231 MAGEE1Q9HCI5 957 aa7.96□□□□□ -1.14
SMG1-202ENST00000446231 CCDC177Q9NQR7 707 aaPredicted RBP7.96□□□□□ -1.14
SMG1-202ENST00000446231 TSR3Q9UJK0 312 aaKnown RBP7.96□□□□□ -1.14
SMG1-202ENST00000446231 SETBP1Q9Y6X0 1596 aa7.96□□□□□ -1.14
SMG1-202ENST00000446231 GRIA2P42262 883 aa7.96□□□□□ -1.14
SMG1-202ENST00000446231 PTPN20Q4JDL3 420 aa7.96□□□□□ -1.14
SMG1-202ENST00000446231 EPGNQ6UW88 154 aa7.96□□□□□ -1.14
SMG1-202ENST00000446231 KBTBD7Q8WVZ9 684 aa7.96□□□□□ -1.14
SMG1-202ENST00000446231 TRIM8Q9BZR9 551 aa7.96□□□□□ -1.14
SMG1-202ENST00000446231 LEF1Q9UJU2 399 aaPredicted RBP7.96□□□□□ -1.14
SMG1-202ENST00000446231 VPS9D1Q9Y2B5 631 aa7.96□□□□□ -1.14
SMG1-202ENST00000446231 MYH9P35579 1960 aaKnown RBP7.96□□□□□ -1.14
SMG1-202ENST00000446231 CENPBD1B2RD01 187 aa7.96□□□□□ -1.14
SMG1-202ENST00000446231 RFPL2O75678 378 aa7.96□□□□□ -1.14
SMG1-202ENST00000446231 COX10Q12887 443 aa7.96□□□□□ -1.14
SMG1-202ENST00000446231 Q6ZNX1 250 aa7.96□□□□□ -1.14
SMG1-202ENST00000446231 SLC15A4Q8N697 577 aa7.96□□□□□ -1.14
SMG1-202ENST00000446231 CIB1Q99828 191 aa7.96□□□□□ -1.14
SMG1-202ENST00000446231 TSEN34Q9BSV6 310 aaKnown RBP7.96□□□□□ -1.14
SMG1-202ENST00000446231 DPP3Q9NY33 737 aa7.96□□□□□ -1.14
SMG1-202ENST00000446231 ST14Q9Y5Y6 855 aa7.96□□□□□ -1.14
SMG1-202ENST00000446231 ALDH4A1P30038 563 aa7.96□□□□□ -1.14
SMG1-202ENST00000446231 ZSWIM7Q19AV6 140 aa7.96□□□□□ -1.14
SMG1-202ENST00000446231 GK5Q6ZS86 529 aa7.96□□□□□ -1.14
SMG1-202ENST00000446231 SLC4A11Q8NBS3 891 aa7.96□□□□□ -1.14
SMG1-202ENST00000446231 CPT1BQ92523 772 aa7.96□□□□□ -1.14
SMG1-202ENST00000446231 ACTR8Q9H981 624 aa7.96□□□□□ -1.14
SMG1-202ENST00000446231 CCNB1IP1Q9NPC3 277 aa7.96□□□□□ -1.14
SMG1-202ENST00000446231 DAGLAQ9Y4D2 1042 aa7.96□□□□□ -1.14
SMG1-202ENST00000446231 POU5F1Q01860 360 aaKnown RBP7.96□□□□□ -1.14
SMG1-202ENST00000446231 PRKD1Q15139 912 aaPredicted RBP7.96□□□□□ -1.14
SMG1-202ENST00000446231 DHRS1Q96LJ7 313 aa7.96□□□□□ -1.14
SMG1-202ENST00000446231 TBCDQ9BTW9 1192 aa7.96□□□□□ -1.14
SMG1-202ENST00000446231 MED28Q9H204 178 aa7.96□□□□□ -1.14
SMG1-202ENST00000446231 TREML1Q86YW5 311 aa7.96□□□□□ -1.14
SMG1-202ENST00000446231 EPB41L4BQ9H329 900 aa7.96□□□□□ -1.14
SMG1-202ENST00000446231 VPS4AQ9UN37 437 aa7.96□□□□□ -1.14
SMG1-202ENST00000446231 LLGL2Q6P1M3 1020 aa7.96□□□□□ -1.14
SMG1-202ENST00000446231 ZC3H7AQ8IWR0 971 aaKnown RBP7.96□□□□□ -1.14
SMG1-202ENST00000446231 NCSTNQ92542 709 aa7.96□□□□□ -1.14
SMG1-202ENST00000446231 RAD54BQ9Y620 910 aa7.96□□□□□ -1.14
SMG1-202ENST00000446231 ASTN1O14525 1302 aa7.96□□□□□ -1.14
SMG1-202ENST00000446231 AHCTF1Q8WYP5 2266 aa7.96□□□□□ -1.14
SMG1-202ENST00000446231 GCATO75600 419 aa7.96□□□□□ -1.14
SMG1-202ENST00000446231 MTHFRP42898 656 aa7.96□□□□□ -1.14
SMG1-202ENST00000446231 GPSM2P81274 684 aa7.96□□□□□ -1.14
SMG1-202ENST00000446231 PFKFB4Q16877 469 aa7.96□□□□□ -1.14
SMG1-202ENST00000446231 SLC7A14Q8TBB6 771 aa7.96□□□□□ -1.14
SMG1-202ENST00000446231 RDH11Q8TC12 318 aa7.96□□□□□ -1.14
SMG1-202ENST00000446231 MLPHQ9BV36 600 aaPredicted RBP7.96□□□□□ -1.14
SMG1-202ENST00000446231 NYAP2Q9P242 653 aa7.96□□□□□ -1.14
SMG1-202ENST00000446231 FADS2O95864 444 aaKnown RBP7.95□□□□□ -1.14
SMG1-202ENST00000446231 TCEA1P23193 301 aaKnown RBP7.95□□□□□ -1.14
SMG1-202ENST00000446231 HNF4AP41235 474 aa7.95□□□□□ -1.14
SMG1-202ENST00000446231 ZYG11AQ6WRX3 759 aa7.95□□□□□ -1.14
SMG1-202ENST00000446231 SLC41A1Q8IVJ1 513 aa7.95□□□□□ -1.14
SMG1-202ENST00000446231 COLGALT1Q8NBJ5 622 aa7.95□□□□□ -1.14
SMG1-202ENST00000446231 ZNF717Q9BY31 904 aaPredicted RBP7.95□□□□□ -1.14
SMG1-202ENST00000446231 TMEM161AQ9NX61 479 aa7.95□□□□□ -1.14
SMG1-202ENST00000446231 ATPIF1Q9UII2 106 aa7.95□□□□□ -1.14
SMG1-202ENST00000446231 PCDHGB4Q9UN71 923 aa7.95□□□□□ -1.14
SMG1-202ENST00000446231 E5RI56 91 aa7.95□□□□□ -1.14
SMG1-202ENST00000446231 RPL7AP62424 266 aaKnown RBP7.95□□□□□ -1.14
SMG1-202ENST00000446231 SCN1BQ07699 218 aa7.95□□□□□ -1.14
SMG1-202ENST00000446231 OGFRL1Q5TC84 451 aaPredicted RBP7.95□□□□□ -1.14
SMG1-202ENST00000446231 PIWIL4Q7Z3Z4 852 aaKnown RBP7.95□□□□□ -1.14
SMG1-202ENST00000446231 RNFT2Q96EX2 444 aa7.95□□□□□ -1.14
SMG1-202ENST00000446231 PRRG3Q9BZD7 231 aa7.95□□□□□ -1.14
SMG1-202ENST00000446231 SNTG2Q9NY99 539 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms