RNA–Protein interactions for RNA: ENST00000445184.1

LINC01004-201, Transcript of long intergenic non-protein coding RNA 1004, humanhuman

TSL 5 BASIC

Gene LINC01004, Length 686 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01004-201ENST00000445184 TXLNGYQ9BZA5 131 aa4.34□□□□□ -1.71
LINC01004-201ENST00000445184 GLIS2Q9BZE0 524 aaPredicted RBP4.34□□□□□ -1.71
LINC01004-201ENST00000445184 TTC12Q9H892 705 aaPredicted RBP4.34□□□□□ -1.71
LINC01004-201ENST00000445184 SFXN1Q9H9B4 322 aa4.34□□□□□ -1.71
LINC01004-201ENST00000445184 ARHGEF3Q9NR81 526 aa4.34□□□□□ -1.71
LINC01004-201ENST00000445184 TMEM248Q9NWD8 314 aa4.34□□□□□ -1.71
LINC01004-201ENST00000445184 ASIC5Q9NY37 505 aa4.34□□□□□ -1.71
LINC01004-201ENST00000445184 NFKBIL1Q9UBC1 381 aaPredicted RBP4.34□□□□□ -1.71
LINC01004-201ENST00000445184 ADAMTS5Q9UNA0 930 aa4.34□□□□□ -1.71
LINC01004-201ENST00000445184 DTX4Q9Y2E6 619 aa4.34□□□□□ -1.71
LINC01004-201ENST00000445184 FNDC1Q4ZHG4 1894 aaPredicted RBP4.34□□□□□ -1.71
LINC01004-201ENST00000445184 SYNJ1O43426 1573 aa4.33□□□□□ -1.72
LINC01004-201ENST00000445184 CLASP1Q7Z460 1538 aa4.33□□□□□ -1.72
LINC01004-201ENST00000445184 ZNF608Q9ULD9 1512 aaPredicted RBP4.33□□□□□ -1.72
LINC01004-201ENST00000445184 C17orf113A0A1B0GUU1 675 aa4.33□□□□□ -1.72
LINC01004-201ENST00000445184 hCG_1807616A0A1W2PRN6 198 aa4.33□□□□□ -1.72
LINC01004-201ENST00000445184 MCIDASD6RGH6 385 aa4.33□□□□□ -1.72
LINC01004-201ENST00000445184 PPEF2O14830 753 aa4.33□□□□□ -1.72
LINC01004-201ENST00000445184 BCAT2O15382 392 aaPredicted RBP4.33□□□□□ -1.72
LINC01004-201ENST00000445184 ERAL1O75616 437 aaKnown RBP4.33□□□□□ -1.72
LINC01004-201ENST00000445184 CNTN5O94779 1100 aa4.33□□□□□ -1.72
LINC01004-201ENST00000445184 SLC3A2P08195 630 aaKnown RBP4.33□□□□□ -1.72
LINC01004-201ENST00000445184 GLULP15104 373 aa4.33□□□□□ -1.72
LINC01004-201ENST00000445184 HOXB9P17482 250 aaPredicted RBP4.33□□□□□ -1.72
LINC01004-201ENST00000445184 FPR3P25089 353 aa4.33□□□□□ -1.72
LINC01004-201ENST00000445184 YY1P25490 414 aa4.33□□□□□ -1.72
LINC01004-201ENST00000445184 SLC8A1P32418 973 aa4.33□□□□□ -1.72
LINC01004-201ENST00000445184 ACTN2P35609 894 aa4.33□□□□□ -1.72
LINC01004-201ENST00000445184 CPOXP36551 454 aa4.33□□□□□ -1.72
LINC01004-201ENST00000445184 GRIA3P42263 894 aa4.33□□□□□ -1.72
LINC01004-201ENST00000445184 EIF3BP55884 814 aaKnown RBP4.33□□□□□ -1.72
LINC01004-201ENST00000445184 WDR5P61964 334 aaKnown RBP4.33□□□□□ -1.72
LINC01004-201ENST00000445184 IFI35P80217 286 aaPredicted RBP4.33□□□□□ -1.72
LINC01004-201ENST00000445184 MC1RQ01726 317 aa4.33□□□□□ -1.72
LINC01004-201ENST00000445184 DCTN2Q13561 401 aaKnown RBP4.33□□□□□ -1.72
LINC01004-201ENST00000445184 TDGQ13569 410 aa4.33□□□□□ -1.72
LINC01004-201ENST00000445184 NAA25Q14CX7 972 aa4.33□□□□□ -1.72
LINC01004-201ENST00000445184 WTAPQ15007 396 aa4.33□□□□□ -1.72
LINC01004-201ENST00000445184 SLC18A3Q16572 532 aa4.33□□□□□ -1.72
LINC01004-201ENST00000445184 RUNDC3AQ59EK9 446 aa4.33□□□□□ -1.72
LINC01004-201ENST00000445184 C1QTNF12Q5T7M4 302 aa4.33□□□□□ -1.72
LINC01004-201ENST00000445184 AADACL2Q6P093 401 aa4.33□□□□□ -1.72
LINC01004-201ENST00000445184 TMEM81Q6P7N7 255 aa4.33□□□□□ -1.72
LINC01004-201ENST00000445184 ZNF474Q6S9Z5 364 aaPredicted RBP4.33□□□□□ -1.72
LINC01004-201ENST00000445184 BCDIN3DQ7Z5W3 292 aaKnown RBP4.33□□□□□ -1.72
LINC01004-201ENST00000445184 RFX6Q8HWS3 928 aa4.33□□□□□ -1.72
LINC01004-201ENST00000445184 BRSK2Q8IWQ3 736 aa4.33□□□□□ -1.72
LINC01004-201ENST00000445184 CNTROBQ8N137 903 aa4.33□□□□□ -1.72
LINC01004-201ENST00000445184 TTC39CQ8N584 583 aa4.33□□□□□ -1.72
LINC01004-201ENST00000445184 ADPRHL1Q8NDY3 354 aa4.33□□□□□ -1.72
LINC01004-201ENST00000445184 SRFBP1Q8NEF9 429 aaKnown RBP4.33□□□□□ -1.72
LINC01004-201ENST00000445184 NCSTNQ92542 709 aa4.33□□□□□ -1.72
LINC01004-201ENST00000445184 CNOT9Q92600 299 aaKnown RBP4.33□□□□□ -1.72
LINC01004-201ENST00000445184 ALKBH4Q9NXW9 302 aa4.33□□□□□ -1.72
LINC01004-201ENST00000445184 NCKIPSDQ9NZQ3 722 aa4.33□□□□□ -1.72
LINC01004-201ENST00000445184 ADD3Q9UEY8 706 aaKnown RBP4.33□□□□□ -1.72
LINC01004-201ENST00000445184 ADAM18Q9Y3Q7 739 aa4.33□□□□□ -1.72
LINC01004-201ENST00000445184 SIRT4Q9Y6E7 314 aaPredicted RBP4.33□□□□□ -1.72
LINC01004-201ENST00000445184 ABCC10Q5T3U5 1492 aa4.32□□□□□ -1.72
LINC01004-201ENST00000445184 IGKV2D-30A0A075B6S6 120 aa4.32□□□□□ -1.72
LINC01004-201ENST00000445184 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP4.32□□□□□ -1.72
LINC01004-201ENST00000445184 CDRT15L2A8MXV6 281 aa4.32□□□□□ -1.72
LINC01004-201ENST00000445184 CES2O00748 559 aa4.32□□□□□ -1.72
LINC01004-201ENST00000445184 PAGE4O60829 102 aa4.32□□□□□ -1.72
LINC01004-201ENST00000445184 DKC1O60832 514 aaKnown RBP eCLIP4.32□□□□□ -1.72
LINC01004-201ENST00000445184 CYP4B1P13584 511 aa4.32□□□□□ -1.72
LINC01004-201ENST00000445184 SHC2P98077 582 aa4.32□□□□□ -1.72
LINC01004-201ENST00000445184 EFNB1P98172 346 aa4.32□□□□□ -1.72
LINC01004-201ENST00000445184 LAMB3Q13751 1172 aa4.32□□□□□ -1.72
LINC01004-201ENST00000445184 IRF3Q14653 427 aa4.32□□□□□ -1.72
LINC01004-201ENST00000445184 TBC1D25Q3MII6 688 aa4.32□□□□□ -1.72
LINC01004-201ENST00000445184 ZNF260Q3ZCT1 412 aa4.32□□□□□ -1.72
LINC01004-201ENST00000445184 AARS2Q5JTZ9 985 aaKnown RBP4.32□□□□□ -1.72
LINC01004-201ENST00000445184 CDC73Q6P1J9 531 aa4.32□□□□□ -1.72
LINC01004-201ENST00000445184 SLC22A25Q6T423 547 aa4.32□□□□□ -1.72
LINC01004-201ENST00000445184 KLHL24Q6TFL4 600 aa4.32□□□□□ -1.72
LINC01004-201ENST00000445184 CYP20A1Q6UW02 462 aa4.32□□□□□ -1.72
LINC01004-201ENST00000445184 KIRREL2Q6UWL6 708 aa4.32□□□□□ -1.72
LINC01004-201ENST00000445184 PEG10Q86TG7 708 aaKnown RBP4.32□□□□□ -1.72
LINC01004-201ENST00000445184 PAQR4Q8N4S7 273 aaPredicted RBP4.32□□□□□ -1.72
LINC01004-201ENST00000445184 WDTC1Q8N5D0 677 aa4.32□□□□□ -1.72
LINC01004-201ENST00000445184 TOR1AIP2Q8NFQ8 470 aa4.32□□□□□ -1.72
LINC01004-201ENST00000445184 ABHD11Q8NFV4 315 aa4.32□□□□□ -1.72
LINC01004-201ENST00000445184 FAM110DQ8TAY7 271 aaPredicted RBP4.32□□□□□ -1.72
LINC01004-201ENST00000445184 ARHGEF2Q92974 986 aaKnown RBP4.32□□□□□ -1.72
LINC01004-201ENST00000445184 SAAL1Q96ER3 474 aa4.32□□□□□ -1.72
LINC01004-201ENST00000445184 FEM1CQ96JP0 617 aa4.32□□□□□ -1.72
LINC01004-201ENST00000445184 MPHOSPH8Q99549 860 aa4.32□□□□□ -1.72
LINC01004-201ENST00000445184 FRMD8Q9BZ67 464 aaPredicted RBP4.32□□□□□ -1.72
LINC01004-201ENST00000445184 VEZTQ9HBM0 779 aa4.32□□□□□ -1.72
LINC01004-201ENST00000445184 Q9N2J8 555 aa4.32□□□□□ -1.72
LINC01004-201ENST00000445184 EIF2B3Q9NR50 452 aaKnown RBP4.32□□□□□ -1.72
LINC01004-201ENST00000445184 PCDHB16Q9NRJ7 776 aa4.32□□□□□ -1.72
LINC01004-201ENST00000445184 SPATS2LQ9NUQ6 558 aaKnown RBP4.32□□□□□ -1.72
LINC01004-201ENST00000445184 UPB1Q9UBR1 384 aa4.32□□□□□ -1.72
LINC01004-201ENST00000445184 EIF4G3O43432 1585 aaKnown RBP4.31□□□□□ -1.72
LINC01004-201ENST00000445184 PCF11O94913 1555 aaKnown RBP4.31□□□□□ -1.72
LINC01004-201ENST00000445184 FANCD2Q9BXW9 1451 aa4.31□□□□□ -1.72
LINC01004-201ENST00000445184 TCRBV5S1A1TA0A578 114 aa4.31□□□□□ -1.72
LINC01004-201ENST00000445184 FRMD3A2A2Y4 597 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms