RNA–Protein interactions for RNA: ENST00000444712.5

SNX13-204, Transcript of sorting nexin 13, humanhuman

TSL 5

Gene SNX13, Length 2,018 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-204ENST00000444712 DCTN3O75935 186 aa15.9■□□□□ 0.14
SNX13-204ENST00000444712 TGDSO95455 350 aa15.9■□□□□ 0.14
SNX13-204ENST00000444712 ALDOAP04075 364 aaKnown RBP15.9■□□□□ 0.14
SNX13-204ENST00000444712 CSF2RAP15509 400 aa15.9■□□□□ 0.14
SNX13-204ENST00000444712 NMBRP28336 390 aa15.9■□□□□ 0.14
SNX13-204ENST00000444712 TYK2P29597 1187 aa15.9■□□□□ 0.14
SNX13-204ENST00000444712 ACTN3Q08043 901 aaPredicted RBP15.9■□□□□ 0.14
SNX13-204ENST00000444712 HSP90AA5PQ58FG0 334 aa15.9■□□□□ 0.14
SNX13-204ENST00000444712 FAM133BQ5BKY9 247 aaKnown RBP15.9■□□□□ 0.14
SNX13-204ENST00000444712 FAM117BQ6P1L5 589 aa15.9■□□□□ 0.14
SNX13-204ENST00000444712 CDHR3Q6ZTQ4 885 aa15.9■□□□□ 0.14
SNX13-204ENST00000444712 OTOAQ7RTW8 1153 aa15.9■□□□□ 0.14
SNX13-204ENST00000444712 NECAB2Q7Z6G3 386 aa15.9■□□□□ 0.14
SNX13-204ENST00000444712 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP15.9■□□□□ 0.14
SNX13-204ENST00000444712 SPOCK2Q92563 424 aa15.9■□□□□ 0.14
SNX13-204ENST00000444712 POLR1EQ9GZS1 481 aaKnown RBP15.9■□□□□ 0.14
SNX13-204ENST00000444712 RXFP1Q9HBX9 757 aa15.9■□□□□ 0.14
SNX13-204ENST00000444712 ANKRD65E5RJM6 399 aa15.9■□□□□ 0.14
SNX13-204ENST00000444712 GJB5O95377 273 aa15.9■□□□□ 0.14
SNX13-204ENST00000444712 ETFBP38117 255 aa15.9■□□□□ 0.14
SNX13-204ENST00000444712 MAGEA12P43365 314 aa15.9■□□□□ 0.14
SNX13-204ENST00000444712 POLD2P49005 469 aa15.9■□□□□ 0.14
SNX13-204ENST00000444712 SLC10A7Q0GE19 358 aa15.9■□□□□ 0.14
SNX13-204ENST00000444712 LAMB3Q13751 1172 aa15.9■□□□□ 0.14
SNX13-204ENST00000444712 ZNF235Q14590 738 aa15.9■□□□□ 0.14
SNX13-204ENST00000444712 SETDB1Q15047 1291 aa15.9■□□□□ 0.14
SNX13-204ENST00000444712 SLC14A2Q15849 920 aa15.9■□□□□ 0.14
SNX13-204ENST00000444712 PABPC1LQ4VXU2 614 aaKnown RBP15.9■□□□□ 0.14
SNX13-204ENST00000444712 HERC6Q8IVU3 1022 aa15.9■□□□□ 0.14
SNX13-204ENST00000444712 CNTN4Q8IWV2 1026 aa15.9■□□□□ 0.14
SNX13-204ENST00000444712 ARMC2Q8NEN0 867 aa15.9■□□□□ 0.14
SNX13-204ENST00000444712 TRIM55Q9BYV6 548 aa15.9■□□□□ 0.14
SNX13-204ENST00000444712 ATP13A1Q9HD20 1204 aa15.9■□□□□ 0.14
SNX13-204ENST00000444712 ASB3Q9Y575 518 aa15.9■□□□□ 0.14
SNX13-204ENST00000444712 STC2O76061 302 aa15.89■□□□□ 0.13
SNX13-204ENST00000444712 CORO1AP31146 461 aaKnown RBP15.89■□□□□ 0.13
SNX13-204ENST00000444712 GNA12Q03113 381 aa15.89■□□□□ 0.13
SNX13-204ENST00000444712 TWF1Q12792 350 aa15.89■□□□□ 0.13
SNX13-204ENST00000444712 ILF2Q12905 390 aaKnown RBP15.89■□□□□ 0.13
SNX13-204ENST00000444712 RFTN1Q14699 578 aaPredicted RBP15.89■□□□□ 0.13
SNX13-204ENST00000444712 POU6F1Q14863 301 aa15.89■□□□□ 0.13
SNX13-204ENST00000444712 KIAA0930Q6ICG6 404 aaPredicted RBP15.89■□□□□ 0.13
SNX13-204ENST00000444712 CCDC91Q7Z6B0 441 aa15.89■□□□□ 0.13
SNX13-204ENST00000444712 DENND1CQ8IV53 801 aa15.89■□□□□ 0.13
SNX13-204ENST00000444712 NUDCD3Q8IVD9 361 aa15.89■□□□□ 0.13
SNX13-204ENST00000444712 E2F7Q96AV8 911 aa15.89■□□□□ 0.13
SNX13-204ENST00000444712 FAM167BQ9BTA0 163 aa15.89■□□□□ 0.13
SNX13-204ENST00000444712 C12orf65Q9H3J6 166 aaKnown RBP15.89■□□□□ 0.13
SNX13-204ENST00000444712 IARS2Q9NSE4 1012 aaKnown RBP15.89■□□□□ 0.13
SNX13-204ENST00000444712 SIRPGQ9P1W8 387 aa15.89■□□□□ 0.13
SNX13-204ENST00000444712 SLC17A6Q9P2U8 582 aa15.89■□□□□ 0.13
SNX13-204ENST00000444712 INSL5Q9Y5Q6 135 aa15.89■□□□□ 0.13
SNX13-204ENST00000444712 A0A1B0GVM2 712 aa15.89■□□□□ 0.13
SNX13-204ENST00000444712 TCAF2A6NFQ2 919 aa15.89■□□□□ 0.13
SNX13-204ENST00000444712 BGNP21810 368 aa15.89■□□□□ 0.13
SNX13-204ENST00000444712 SLC6A4P31645 630 aa15.89■□□□□ 0.13
SNX13-204ENST00000444712 CD86P42081 329 aa15.89■□□□□ 0.13
SNX13-204ENST00000444712 LIG3P49916 1009 aa15.89■□□□□ 0.13
SNX13-204ENST00000444712 SERPINH1P50454 418 aaKnown RBP15.89■□□□□ 0.13
SNX13-204ENST00000444712 PDE1CQ14123 709 aaPredicted RBP15.89■□□□□ 0.13
SNX13-204ENST00000444712 CCDC153Q494R4 210 aa15.89■□□□□ 0.13
SNX13-204ENST00000444712 ADGRF1Q5T601 910 aa15.89■□□□□ 0.13
SNX13-204ENST00000444712 NLRP9Q7RTR0 991 aa15.89■□□□□ 0.13
SNX13-204ENST00000444712 SETD3Q86TU7 594 aaPredicted RBP15.89■□□□□ 0.13
SNX13-204ENST00000444712 LCA5Q86VQ0 697 aa15.89■□□□□ 0.13
SNX13-204ENST00000444712 CIR1Q86X95 450 aaPredicted RBP15.89■□□□□ 0.13
SNX13-204ENST00000444712 C10orf67Q8IYJ2 551 aa15.89■□□□□ 0.13
SNX13-204ENST00000444712 DCLK2Q8N568 766 aa15.89■□□□□ 0.13
SNX13-204ENST00000444712 CALML6Q8TD86 181 aa15.89■□□□□ 0.13
SNX13-204ENST00000444712 TADA1Q96BN2 335 aa15.89■□□□□ 0.13
SNX13-204ENST00000444712 KLHL5Q96PQ7 755 aa15.89■□□□□ 0.13
SNX13-204ENST00000444712 KLF16Q9BXK1 252 aaPredicted RBP15.89■□□□□ 0.13
SNX13-204ENST00000444712 RHOJQ9H4E5 214 aa15.89■□□□□ 0.13
SNX13-204ENST00000444712 SNX15Q9NRS6 342 aa15.89■□□□□ 0.13
SNX13-204ENST00000444712 ZFP37Q9Y6Q3 630 aaPredicted RBP15.89■□□□□ 0.13
SNX13-204ENST00000444712 DENND4CQ5VZ89 1909 aa15.88■□□□□ 0.13
SNX13-204ENST00000444712 ILVBLA1L0T0 632 aa15.88■□□□□ 0.13
SNX13-204ENST00000444712 TRIM43BA6NCK2 446 aa15.88■□□□□ 0.13
SNX13-204ENST00000444712 H0YHG0 523 aa15.88■□□□□ 0.13
SNX13-204ENST00000444712 SIN3BO75182 1162 aa15.88■□□□□ 0.13
SNX13-204ENST00000444712 PAPSS2O95340 614 aaPredicted RBP15.88■□□□□ 0.13
SNX13-204ENST00000444712 BPGMP07738 259 aa15.88■□□□□ 0.13
SNX13-204ENST00000444712 SF3A3Q12874 501 aaKnown RBP eCLIP15.88■□□□□ 0.13
SNX13-204ENST00000444712 THOC5Q13769 683 aaKnown RBP15.88■□□□□ 0.13
SNX13-204ENST00000444712 PCSK7Q16549 785 aa15.88■□□□□ 0.13
SNX13-204ENST00000444712 ALG1LQ6GMV1 187 aa15.88■□□□□ 0.13
SNX13-204ENST00000444712 FSTL4Q6MZW2 842 aa15.88■□□□□ 0.13
SNX13-204ENST00000444712 DNAJB7Q7Z6W7 309 aaPredicted RBP15.88■□□□□ 0.13
SNX13-204ENST00000444712 TRIM43Q96BQ3 446 aaPredicted RBP15.88■□□□□ 0.13
SNX13-204ENST00000444712 C7orf26Q96N11 449 aa15.88■□□□□ 0.13
SNX13-204ENST00000444712 AGAP2Q99490 1192 aa15.88■□□□□ 0.13
SNX13-204ENST00000444712 PDFQ9HBH1 243 aa15.88■□□□□ 0.13
SNX13-204ENST00000444712 IL23AQ9NPF7 189 aa15.88■□□□□ 0.13
SNX13-204ENST00000444712 ABCF3Q9NUQ8 709 aa15.88■□□□□ 0.13
SNX13-204ENST00000444712 IL1RAPL1Q9NZN1 696 aa15.88■□□□□ 0.13
SNX13-204ENST00000444712 MID2Q9UJV3 735 aa15.88■□□□□ 0.13
SNX13-204ENST00000444712 SLC12A4Q9UP95 1085 aa15.88■□□□□ 0.13
SNX13-204ENST00000444712 ANKRD6Q9Y2G4 727 aa15.88■□□□□ 0.13
SNX13-204ENST00000444712 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP15.87■□□□□ 0.13
SNX13-204ENST00000444712 HLA-DPA1P20036 260 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms