RNA–Protein interactions for RNA: ENST00000442232.1

TTC28-203, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 2

Gene TTC28, Length 499 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-203ENST00000442232 RHOQP17081 205 aa12□□□□□ -0.49
TTC28-203ENST00000442232 CDK11BP21127 795 aaKnown RBP12□□□□□ -0.49
TTC28-203ENST00000442232 PTPN9P43378 593 aa12□□□□□ -0.49
TTC28-203ENST00000442232 KLK7P49862 253 aa12□□□□□ -0.49
TTC28-203ENST00000442232 FMO1Q01740 532 aa12□□□□□ -0.49
TTC28-203ENST00000442232 NRG1Q02297 640 aaPredicted RBP12□□□□□ -0.49
TTC28-203ENST00000442232 SGCGQ13326 291 aa12□□□□□ -0.49
TTC28-203ENST00000442232 C15orf59Q2T9L4 293 aaPredicted RBP12□□□□□ -0.49
TTC28-203ENST00000442232 COL28A1Q2UY09 1125 aa12□□□□□ -0.49
TTC28-203ENST00000442232 ZNF284Q2VY69 593 aa12□□□□□ -0.49
TTC28-203ENST00000442232 EFHC2Q5JST6 749 aa12□□□□□ -0.49
TTC28-203ENST00000442232 HES3Q5TGS1 186 aa12□□□□□ -0.49
TTC28-203ENST00000442232 TRNP1Q6NT89 227 aa12□□□□□ -0.49
TTC28-203ENST00000442232 STRADAQ7RTN6 431 aa12□□□□□ -0.49
TTC28-203ENST00000442232 BNIPLQ7Z465 357 aa12□□□□□ -0.49
TTC28-203ENST00000442232 PHLDB2Q86SQ0 1253 aa12□□□□□ -0.49
TTC28-203ENST00000442232 TMEM145Q8NBT3 493 aa12□□□□□ -0.49
TTC28-203ENST00000442232 SLC30A5Q8TAD4 765 aa12□□□□□ -0.49
TTC28-203ENST00000442232 FAM172AQ8WUF8 416 aa12□□□□□ -0.49
TTC28-203ENST00000442232 ISG20Q96AZ6 181 aaKnown RBP12□□□□□ -0.49
TTC28-203ENST00000442232 FEM1CQ96JP0 617 aa12□□□□□ -0.49
TTC28-203ENST00000442232 TM6SF2Q9BZW4 377 aa12□□□□□ -0.49
TTC28-203ENST00000442232 KLHL11Q9NVR0 708 aa12□□□□□ -0.49
TTC28-203ENST00000442232 ANO10Q9NW15 660 aa12□□□□□ -0.49
TTC28-203ENST00000442232 IPO11Q9UI26 975 aaKnown RBP12□□□□□ -0.49
TTC28-203ENST00000442232 DNAI1Q9UI46 699 aa12□□□□□ -0.49
TTC28-203ENST00000442232 FCF1Q9Y324 198 aaKnown RBP12□□□□□ -0.49
TTC28-203ENST00000442232 AK5Q9Y6K8 562 aa12□□□□□ -0.49
TTC28-203ENST00000442232 WASF2Q9Y6W5 498 aa12□□□□□ -0.49
TTC28-203ENST00000442232 KNTC1P50748 2209 aa11.99□□□□□ -0.49
TTC28-203ENST00000442232 SPEGQ15772 3267 aa11.99□□□□□ -0.49
TTC28-203ENST00000442232 NEMP2A6NFY4 417 aa11.99□□□□□ -0.49
TTC28-203ENST00000442232 ZSCAN5CA6NGD5 496 aaPredicted RBP11.99□□□□□ -0.49
TTC28-203ENST00000442232 C2CD4BA6NLJ0 364 aa11.99□□□□□ -0.49
TTC28-203ENST00000442232 H3BM21 787 aa11.99□□□□□ -0.49
TTC28-203ENST00000442232 FFAR2O15552 330 aa11.99□□□□□ -0.49
TTC28-203ENST00000442232 ZMPSTE24O75844 475 aa11.99□□□□□ -0.49
TTC28-203ENST00000442232 PLEKP08567 350 aaPredicted RBP11.99□□□□□ -0.49
TTC28-203ENST00000442232 CCDC172P0C7W6 258 aa11.99□□□□□ -0.49
TTC28-203ENST00000442232 GPD1P21695 349 aa11.99□□□□□ -0.49
TTC28-203ENST00000442232 L1CAMP32004 1257 aa11.99□□□□□ -0.49
TTC28-203ENST00000442232 ADRA1BP35368 520 aa11.99□□□□□ -0.49
TTC28-203ENST00000442232 COPB1P53618 953 aaKnown RBP11.99□□□□□ -0.49
TTC28-203ENST00000442232 JAM2P57087 298 aa11.99□□□□□ -0.49
TTC28-203ENST00000442232 HNRNPKP61978 463 aaKnown RBP eCLIP11.99□□□□□ -0.49
TTC28-203ENST00000442232 SNRPD1P62314 119 aaKnown RBP11.99□□□□□ -0.49
TTC28-203ENST00000442232 ARF5P84085 180 aa11.99□□□□□ -0.49
TTC28-203ENST00000442232 MYL5Q02045 173 aa11.99□□□□□ -0.49
TTC28-203ENST00000442232 RAD51Q06609 339 aa11.99□□□□□ -0.49
TTC28-203ENST00000442232 ZNF211Q13398 564 aaPredicted RBP11.99□□□□□ -0.49
TTC28-203ENST00000442232 CAMK2BQ13554 666 aa11.99□□□□□ -0.49
TTC28-203ENST00000442232 STX1AQ16623 288 aa11.99□□□□□ -0.49
TTC28-203ENST00000442232 CCDC14Q49A88 953 aa11.99□□□□□ -0.49
TTC28-203ENST00000442232 SEL1L3Q68CR1 1132 aa11.99□□□□□ -0.49
TTC28-203ENST00000442232 DNAJC24Q6P3W2 148 aa11.99□□□□□ -0.49
TTC28-203ENST00000442232 PARS2Q7L3T8 475 aaKnown RBP11.99□□□□□ -0.49
TTC28-203ENST00000442232 OR13H1Q8NG92 308 aa11.99□□□□□ -0.49
TTC28-203ENST00000442232 OR4C6Q8NH72 309 aa11.99□□□□□ -0.49
TTC28-203ENST00000442232 GPT2Q8TD30 523 aa11.99□□□□□ -0.49
TTC28-203ENST00000442232 HNRNPLLQ8WVV9 542 aaKnown RBP11.99□□□□□ -0.49
TTC28-203ENST00000442232 TSC1Q92574 1164 aa11.99□□□□□ -0.49
TTC28-203ENST00000442232 RAB7BQ96AH8 199 aa11.99□□□□□ -0.49
TTC28-203ENST00000442232 ARHGEF26Q96DR7 871 aa11.99□□□□□ -0.49
TTC28-203ENST00000442232 LRIG1Q96JA1 1093 aa11.99□□□□□ -0.49
TTC28-203ENST00000442232 DCBLD2Q96PD2 775 aa11.99□□□□□ -0.49
TTC28-203ENST00000442232 OSBPL1AQ9BXW6 950 aa11.99□□□□□ -0.49
TTC28-203ENST00000442232 SLC17A9Q9BYT1 436 aa11.99□□□□□ -0.49
TTC28-203ENST00000442232 OSBPL2Q9H1P3 480 aa11.99□□□□□ -0.49
TTC28-203ENST00000442232 MAGEH1Q9H213 219 aa11.99□□□□□ -0.49
TTC28-203ENST00000442232 SCUBE2Q9NQ36 999 aa11.99□□□□□ -0.49
TTC28-203ENST00000442232 LMBRD1Q9NUN5 540 aa11.99□□□□□ -0.49
TTC28-203ENST00000442232 FANCLQ9NW38 375 aa11.99□□□□□ -0.49
TTC28-203ENST00000442232 TMEM248Q9NWD8 314 aa11.99□□□□□ -0.49
TTC28-203ENST00000442232 DNAJC28Q9NX36 388 aa11.99□□□□□ -0.49
TTC28-203ENST00000442232 HECAQ9UBI9 543 aaPredicted RBP11.99□□□□□ -0.49
TTC28-203ENST00000442232 ARID1BQ8NFD5 2236 aaPredicted RBP11.99□□□□□ -0.49
TTC28-203ENST00000442232 FREM2Q5SZK8 3169 aa11.98□□□□□ -0.49
TTC28-203ENST00000442232 URB1O60287 2271 aaKnown RBP11.98□□□□□ -0.49
TTC28-203ENST00000442232 KRIT1O00522 736 aa11.98□□□□□ -0.49
TTC28-203ENST00000442232 FPGTO14772 594 aa11.98□□□□□ -0.49
TTC28-203ENST00000442232 TSPAN6O43657 245 aa11.98□□□□□ -0.49
TTC28-203ENST00000442232 SIGLEC6O43699 453 aa11.98□□□□□ -0.49
TTC28-203ENST00000442232 AP1G1O43747 822 aa11.98□□□□□ -0.49
TTC28-203ENST00000442232 PIAS2O75928 621 aa11.98□□□□□ -0.49
TTC28-203ENST00000442232 GSRP00390 522 aa11.98□□□□□ -0.49
TTC28-203ENST00000442232 CHRNB2P17787 502 aa11.98□□□□□ -0.49
TTC28-203ENST00000442232 DGKAP23743 735 aa11.98□□□□□ -0.49
TTC28-203ENST00000442232 ACP1P24666 158 aa11.98□□□□□ -0.49
TTC28-203ENST00000442232 ACVRL1P37023 503 aa11.98□□□□□ -0.49
TTC28-203ENST00000442232 ABCG1P45844 678 aa11.98□□□□□ -0.49
TTC28-203ENST00000442232 RABIFP47224 123 aa11.98□□□□□ -0.49
TTC28-203ENST00000442232 DUSP3P51452 185 aaPredicted RBP11.98□□□□□ -0.49
TTC28-203ENST00000442232 GSCP56915 257 aaPredicted RBP11.98□□□□□ -0.49
TTC28-203ENST00000442232 CLDN2P57739 230 aa11.98□□□□□ -0.49
TTC28-203ENST00000442232 E2F1Q01094 437 aa11.98□□□□□ -0.49
TTC28-203ENST00000442232 UBXN1Q04323 297 aa11.98□□□□□ -0.49
TTC28-203ENST00000442232 CLEC16AQ2KHT3 1053 aa11.98□□□□□ -0.49
TTC28-203ENST00000442232 TMEM259Q4ZIN3 620 aa11.98□□□□□ -0.49
TTC28-203ENST00000442232 SCYL2Q6P3W7 929 aa11.98□□□□□ -0.49
TTC28-203ENST00000442232 KYAT3Q6YP21 454 aaKnown RBP11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms