RNA–Protein interactions for RNA: ENST00000440097.5

LIMD1-202, Transcript of LIM domains containing 1, humanhuman

TSL 5 BASIC

Gene LIMD1, Length 2,773 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-202ENST00000440097 MRPL9Q9BYD2 267 aaKnown RBP14.39□□□□□ -0.11
LIMD1-202ENST00000440097 NDE1Q9NXR1 346 aa14.39□□□□□ -0.11
LIMD1-202ENST00000440097 G3BP2Q9UN86 482 aaKnown RBP14.39□□□□□ -0.11
LIMD1-202ENST00000440097 CDY1Q9Y6F8 540 aa14.39□□□□□ -0.11
LIMD1-202ENST00000440097 SLC4A7Q9Y6M7 1214 aa14.39□□□□□ -0.11
LIMD1-202ENST00000440097 MYO16Q9Y6X6 1858 aa14.38□□□□□ -0.11
LIMD1-202ENST00000440097 FAM237BA0A1B0GVD1 139 aa14.38□□□□□ -0.11
LIMD1-202ENST00000440097 FAM159BA6NKW6 160 aa14.38□□□□□ -0.11
LIMD1-202ENST00000440097 F8W8V4 182 aa14.38□□□□□ -0.11
LIMD1-202ENST00000440097 MAGEC1O60732 1142 aa14.38□□□□□ -0.11
LIMD1-202ENST00000440097 RNASEH1O60930 286 aaKnown RBP14.38□□□□□ -0.11
LIMD1-202ENST00000440097 GALTP07902 379 aa14.38□□□□□ -0.11
LIMD1-202ENST00000440097 ERVK-10P10266 1014 aa14.38□□□□□ -0.11
LIMD1-202ENST00000440097 CD68P34810 354 aaPredicted RBP14.38□□□□□ -0.11
LIMD1-202ENST00000440097 CDC16Q13042 620 aa14.38□□□□□ -0.11
LIMD1-202ENST00000440097 USP4Q13107 963 aa14.38□□□□□ -0.11
LIMD1-202ENST00000440097 KIAA1841Q6NSI8 718 aa14.38□□□□□ -0.11
LIMD1-202ENST00000440097 RSPO2Q6UXX9 243 aaPredicted RBP14.38□□□□□ -0.11
LIMD1-202ENST00000440097 TAS1R1Q7RTX1 841 aa14.38□□□□□ -0.11
LIMD1-202ENST00000440097 KDELC2Q7Z4H8 507 aa14.38□□□□□ -0.11
LIMD1-202ENST00000440097 C14orf80Q86SX3 495 aa14.38□□□□□ -0.11
LIMD1-202ENST00000440097 RASSF3Q86WH2 238 aa14.38□□□□□ -0.11
LIMD1-202ENST00000440097 ARNTL2Q8WYA1 636 aa14.38□□□□□ -0.11
LIMD1-202ENST00000440097 ZNF669Q96BR6 464 aaPredicted RBP14.38□□□□□ -0.11
LIMD1-202ENST00000440097 TEKT5Q96M29 485 aa14.38□□□□□ -0.11
LIMD1-202ENST00000440097 NAT9Q9BTE0 207 aa14.38□□□□□ -0.11
LIMD1-202ENST00000440097 TTPALQ9BTX7 342 aa14.38□□□□□ -0.11
LIMD1-202ENST00000440097 ZNF180Q9UJW8 692 aa14.38□□□□□ -0.11
LIMD1-202ENST00000440097 TLR6Q9Y2C9 796 aa14.38□□□□□ -0.11
LIMD1-202ENST00000440097 MTMR11A4FU01 709 aa14.38□□□□□ -0.11
LIMD1-202ENST00000440097 KCNU1A8MYU2 1149 aa14.38□□□□□ -0.11
LIMD1-202ENST00000440097 PDLIM1O00151 329 aa14.38□□□□□ -0.11
LIMD1-202ENST00000440097 TGDSO95455 350 aa14.38□□□□□ -0.11
LIMD1-202ENST00000440097 SPATA31D3P0C874 917 aa14.38□□□□□ -0.11
LIMD1-202ENST00000440097 ELAVL2Q12926 359 aaKnown RBP14.38□□□□□ -0.11
LIMD1-202ENST00000440097 SPATA31D4Q6ZUB0 917 aa14.38□□□□□ -0.11
LIMD1-202ENST00000440097 NET1Q7Z628 596 aaPredicted RBP14.38□□□□□ -0.11
LIMD1-202ENST00000440097 MYLK4Q86YV6 388 aaPredicted RBP14.38□□□□□ -0.11
LIMD1-202ENST00000440097 TREML1Q86YW5 311 aa14.38□□□□□ -0.11
LIMD1-202ENST00000440097 SCUBE1Q8IWY4 988 aa14.38□□□□□ -0.11
LIMD1-202ENST00000440097 RBM15BQ8NDT2 890 aaKnown RBP14.38□□□□□ -0.11
LIMD1-202ENST00000440097 SPATA22Q8NHS9 363 aa14.38□□□□□ -0.11
LIMD1-202ENST00000440097 ATXN7L3BQ96GX2 97 aa14.38□□□□□ -0.11
LIMD1-202ENST00000440097 SRPK1Q96SB4 655 aaKnown RBP14.38□□□□□ -0.11
LIMD1-202ENST00000440097 SLC39A8Q9C0K1 460 aa14.38□□□□□ -0.11
LIMD1-202ENST00000440097 NACA2Q9H009 215 aa14.38□□□□□ -0.11
LIMD1-202ENST00000440097 CRISPLD1Q9H336 500 aa14.38□□□□□ -0.11
LIMD1-202ENST00000440097 TLR8Q9NR97 1041 aaKnown RBP14.38□□□□□ -0.11
LIMD1-202ENST00000440097 LOC101059915A0A1B0GWI6 518 aaPredicted RBP14.37□□□□□ -0.11
LIMD1-202ENST00000440097 CIB2O75838 187 aa14.37□□□□□ -0.11
LIMD1-202ENST00000440097 SLC2A3P11169 496 aa14.37□□□□□ -0.11
LIMD1-202ENST00000440097 RPL17P18621 184 aaKnown RBP14.37□□□□□ -0.11
LIMD1-202ENST00000440097 FGFR3P22607 806 aa14.37□□□□□ -0.11
LIMD1-202ENST00000440097 CRABP2P29373 138 aa14.37□□□□□ -0.11
LIMD1-202ENST00000440097 PDE1BQ01064 536 aa14.37□□□□□ -0.11
LIMD1-202ENST00000440097 PABPC1LQ4VXU2 614 aaKnown RBP14.37□□□□□ -0.11
LIMD1-202ENST00000440097 CFAP157Q5JU67 520 aa14.37□□□□□ -0.11
LIMD1-202ENST00000440097 CERCAMQ5T4B2 595 aa14.37□□□□□ -0.11
LIMD1-202ENST00000440097 FAM117BQ6P1L5 589 aa14.37□□□□□ -0.11
LIMD1-202ENST00000440097 TMPRSS6Q8IU80 811 aa14.37□□□□□ -0.11
LIMD1-202ENST00000440097 NDUFAF2Q8N183 169 aa14.37□□□□□ -0.11
LIMD1-202ENST00000440097 EBF3Q9H4W6 596 aa14.37□□□□□ -0.11
LIMD1-202ENST00000440097 MOCS1Q9NZB8 636 aa14.37□□□□□ -0.11
LIMD1-202ENST00000440097 MARCH2Q9P0N8 246 aa14.37□□□□□ -0.11
LIMD1-202ENST00000440097 ATXN10Q9UBB4 475 aa14.37□□□□□ -0.11
LIMD1-202ENST00000440097 PPM1HQ9ULR3 514 aa14.37□□□□□ -0.11
LIMD1-202ENST00000440097 SLC12A8A0AV02 714 aa14.37□□□□□ -0.11
LIMD1-202ENST00000440097 H7C4K7 107 aa14.37□□□□□ -0.11
LIMD1-202ENST00000440097 MT-CYBP00156 380 aaPredicted RBP14.37□□□□□ -0.11
LIMD1-202ENST00000440097 MAGEA11P43364 429 aa14.37□□□□□ -0.11
LIMD1-202ENST00000440097 AP2B1P63010 937 aa14.37□□□□□ -0.11
LIMD1-202ENST00000440097 GPR17Q13304 367 aa14.37□□□□□ -0.11
LIMD1-202ENST00000440097 LSAMPQ13449 338 aa14.37□□□□□ -0.11
LIMD1-202ENST00000440097 EIF4EBP2Q13542 120 aaPredicted RBP14.37□□□□□ -0.11
LIMD1-202ENST00000440097 CDHR3Q6ZTQ4 885 aa14.37□□□□□ -0.11
LIMD1-202ENST00000440097 SH2D5Q6ZV89 423 aa14.37□□□□□ -0.11
LIMD1-202ENST00000440097 ANKS3Q6ZW76 656 aa14.37□□□□□ -0.11
LIMD1-202ENST00000440097 MARK2Q7KZI7 788 aaKnown RBP14.37□□□□□ -0.11
LIMD1-202ENST00000440097 LRRC43Q8N309 656 aa14.37□□□□□ -0.11
LIMD1-202ENST00000440097 LZTR1Q8N653 840 aa14.37□□□□□ -0.11
LIMD1-202ENST00000440097 IPMKQ8NFU5 416 aa14.37□□□□□ -0.11
LIMD1-202ENST00000440097 SPPL2BQ8TCT7 592 aa14.37□□□□□ -0.11
LIMD1-202ENST00000440097 THTPAQ9BU02 230 aa14.37□□□□□ -0.11
LIMD1-202ENST00000440097 CCDC28BQ9BUN5 200 aa14.37□□□□□ -0.11
LIMD1-202ENST00000440097 LRRC40Q9H9A6 602 aa14.37□□□□□ -0.11
LIMD1-202ENST00000440097 VWA8A3KMH1 1905 aa14.36□□□□□ -0.11
LIMD1-202ENST00000440097 CCL5P13501 91 aa14.36□□□□□ -0.11
LIMD1-202ENST00000440097 SERPINB9P50453 376 aa14.36□□□□□ -0.11
LIMD1-202ENST00000440097 MLLT6P55198 1093 aaPredicted RBP14.36□□□□□ -0.11
LIMD1-202ENST00000440097 IRX4P78413 519 aa14.36□□□□□ -0.11
LIMD1-202ENST00000440097 PIK3R6Q5UE93 754 aa14.36□□□□□ -0.11
LIMD1-202ENST00000440097 SDCCAG8Q86SQ7 713 aaPredicted RBP14.36□□□□□ -0.11
LIMD1-202ENST00000440097 ULK2Q8IYT8 1036 aa14.36□□□□□ -0.11
LIMD1-202ENST00000440097 SLC25A41Q8N5S1 370 aa14.36□□□□□ -0.11
LIMD1-202ENST00000440097 CNTD1Q8N815 330 aa14.36□□□□□ -0.11
LIMD1-202ENST00000440097 PPP2R3CQ969Q6 453 aa14.36□□□□□ -0.11
LIMD1-202ENST00000440097 MTBPQ96DY7 904 aa14.36□□□□□ -0.11
LIMD1-202ENST00000440097 MLPHQ9BV36 600 aaPredicted RBP14.36□□□□□ -0.11
LIMD1-202ENST00000440097 COMMD3-BMI1R4GMX3 469 aa14.36□□□□□ -0.11
LIMD1-202ENST00000440097 BPTFQ12830 3046 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms