RNA–Protein interactions for RNA: ENST00000439986.8

CCBE1-202, Transcript of collagen and calcium binding EGF domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCBE1, Length 6,227 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCBE1-202ENST00000439986 ZNF132P52740 706 aa11.72□□□□□ -0.53
CCBE1-202ENST00000439986 PARP6Q2NL67 630 aa11.72□□□□□ -0.53
CCBE1-202ENST00000439986 N4BP2L1Q5TBK1 243 aaPredicted RBP11.72□□□□□ -0.53
CCBE1-202ENST00000439986 NAPEPLDQ6IQ20 393 aa11.72□□□□□ -0.53
CCBE1-202ENST00000439986 ADGRF2Q8IZF7 708 aa11.72□□□□□ -0.53
CCBE1-202ENST00000439986 FAM13CQ8NE31 585 aa11.72□□□□□ -0.53
CCBE1-202ENST00000439986 TIMM29Q9BSF4 260 aa11.72□□□□□ -0.53
CCBE1-202ENST00000439986 XKR8Q9H6D3 395 aa11.72□□□□□ -0.53
CCBE1-202ENST00000439986 WDR6Q9NNW5 1121 aaKnown RBP11.72□□□□□ -0.53
CCBE1-202ENST00000439986 CYLDQ9NQC7 956 aa11.72□□□□□ -0.53
CCBE1-202ENST00000439986 THAP1Q9NVV9 213 aa11.72□□□□□ -0.53
CCBE1-202ENST00000439986 SAE1Q9UBE0 346 aaPredicted RBP11.72□□□□□ -0.53
CCBE1-202ENST00000439986 USP20Q9Y2K6 914 aa11.72□□□□□ -0.53
CCBE1-202ENST00000439986 INPPL1O15357 1258 aa11.72□□□□□ -0.53
CCBE1-202ENST00000439986 EDF1O60869 148 aaKnown RBP11.72□□□□□ -0.53
CCBE1-202ENST00000439986 B3GAT3O94766 335 aa11.72□□□□□ -0.53
CCBE1-202ENST00000439986 ATP5BP06576 529 aaKnown RBP11.72□□□□□ -0.53
CCBE1-202ENST00000439986 POU2F2P09086 479 aa11.72□□□□□ -0.53
CCBE1-202ENST00000439986 RAG1P15918 1043 aa11.72□□□□□ -0.53
CCBE1-202ENST00000439986 FDFT1P37268 417 aa11.72□□□□□ -0.53
CCBE1-202ENST00000439986 FCGRTP55899 365 aa11.72□□□□□ -0.53
CCBE1-202ENST00000439986 TRAF2Q12933 501 aa11.72□□□□□ -0.53
CCBE1-202ENST00000439986 PDK2Q15119 407 aa11.72□□□□□ -0.53
CCBE1-202ENST00000439986 WLSQ5T9L3 541 aa11.72□□□□□ -0.53
CCBE1-202ENST00000439986 RNF180Q86T96 592 aa11.72□□□□□ -0.53
CCBE1-202ENST00000439986 TRABD2AQ86V40 505 aa11.72□□□□□ -0.53
CCBE1-202ENST00000439986 PYDC1Q8WXC3 89 aa11.72□□□□□ -0.53
CCBE1-202ENST00000439986 SHC3Q92529 594 aa11.72□□□□□ -0.53
CCBE1-202ENST00000439986 TPD52L3Q96J77 140 aa11.72□□□□□ -0.53
CCBE1-202ENST00000439986 VPS28Q9UK41 221 aa11.72□□□□□ -0.53
CCBE1-202ENST00000439986 TMX2Q9Y320 296 aa11.72□□□□□ -0.53
CCBE1-202ENST00000439986 CNTNAP2Q9UHC6 1331 aa11.72□□□□□ -0.53
CCBE1-202ENST00000439986 CYP3A7-CYP3A51PA0A087WV96 503 aa11.72□□□□□ -0.53
CCBE1-202ENST00000439986 PSMD9O00233 223 aa11.72□□□□□ -0.53
CCBE1-202ENST00000439986 HSPA12AO43301 675 aa11.72□□□□□ -0.53
CCBE1-202ENST00000439986 KERAO60938 352 aa11.72□□□□□ -0.53
CCBE1-202ENST00000439986 CYP3A7P24462 503 aa11.72□□□□□ -0.53
CCBE1-202ENST00000439986 HNF4AP41235 474 aa11.72□□□□□ -0.53
CCBE1-202ENST00000439986 AASDHQ4L235 1098 aaPredicted RBP11.72□□□□□ -0.53
CCBE1-202ENST00000439986 ISLR2Q6UXK2 745 aa11.72□□□□□ -0.53
CCBE1-202ENST00000439986 TADA1Q96BN2 335 aa11.72□□□□□ -0.53
CCBE1-202ENST00000439986 FAM163AQ96GL9 167 aaPredicted RBP11.72□□□□□ -0.53
CCBE1-202ENST00000439986 BCL2L14Q9BZR8 327 aa11.72□□□□□ -0.53
CCBE1-202ENST00000439986 KRCC1Q9NPI7 259 aaPredicted RBP11.72□□□□□ -0.53
CCBE1-202ENST00000439986 DYRK1BQ9Y463 629 aa11.72□□□□□ -0.53
CCBE1-202ENST00000439986 SLIT3O75094 1523 aa11.72□□□□□ -0.53
CCBE1-202ENST00000439986 ERI2A8K979 691 aaKnown RBP11.72□□□□□ -0.53
CCBE1-202ENST00000439986 CCNT2O60583 730 aaKnown RBP11.72□□□□□ -0.53
CCBE1-202ENST00000439986 CKMP06732 381 aa11.72□□□□□ -0.53
CCBE1-202ENST00000439986 DPEP1P16444 411 aa11.72□□□□□ -0.53
CCBE1-202ENST00000439986 RRM2P31350 389 aa11.72□□□□□ -0.53
CCBE1-202ENST00000439986 NAMPTP43490 491 aa11.72□□□□□ -0.53
CCBE1-202ENST00000439986 CSHL1Q14406 222 aa11.72□□□□□ -0.53
CCBE1-202ENST00000439986 MYBPC3Q14896 1274 aa11.72□□□□□ -0.53
CCBE1-202ENST00000439986 ADRM1Q16186 407 aa11.72□□□□□ -0.53
CCBE1-202ENST00000439986 TRIM71Q2Q1W2 868 aaKnown RBP11.72□□□□□ -0.53
CCBE1-202ENST00000439986 CCNJLQ8IV13 435 aa11.72□□□□□ -0.53
CCBE1-202ENST00000439986 GRIN3AQ8TCU5 1115 aa11.72□□□□□ -0.53
CCBE1-202ENST00000439986 FAM172AQ8WUF8 416 aa11.72□□□□□ -0.53
CCBE1-202ENST00000439986 CELF6Q96J87 481 aaKnown RBP11.72□□□□□ -0.53
CCBE1-202ENST00000439986 CCDC3Q9BQI4 270 aa11.72□□□□□ -0.53
CCBE1-202ENST00000439986 DDX18Q9NVP1 670 aaKnown RBP11.72□□□□□ -0.53
CCBE1-202ENST00000439986 KCNK4Q9NYG8 393 aa11.72□□□□□ -0.53
CCBE1-202ENST00000439986 NDOR1Q9UHB4 597 aa11.72□□□□□ -0.53
CCBE1-202ENST00000439986 FAM25EA8MYX2 175 aa11.72□□□□□ -0.53
CCBE1-202ENST00000439986 BTBD19C9JJ37 291 aa11.72□□□□□ -0.53
CCBE1-202ENST00000439986 LIASO43766 372 aa11.72□□□□□ -0.53
CCBE1-202ENST00000439986 POMCP01189 267 aa11.72□□□□□ -0.53
CCBE1-202ENST00000439986 GSTT1P30711 240 aa11.72□□□□□ -0.53
CCBE1-202ENST00000439986 BNC1Q01954 994 aa11.72□□□□□ -0.53
CCBE1-202ENST00000439986 ASTE1Q2TB18 679 aaPredicted RBP11.72□□□□□ -0.53
CCBE1-202ENST00000439986 PTPN20Q4JDL3 420 aa11.72□□□□□ -0.53
CCBE1-202ENST00000439986 HYIQ5T013 277 aa11.72□□□□□ -0.53
CCBE1-202ENST00000439986 SEL1L3Q68CR1 1132 aa11.72□□□□□ -0.53
CCBE1-202ENST00000439986 ECHDC2Q86YB7 292 aa11.72□□□□□ -0.53
CCBE1-202ENST00000439986 PHC2Q8IXK0 858 aa11.72□□□□□ -0.53
CCBE1-202ENST00000439986 TRPC4APQ8TEL6 797 aa11.72□□□□□ -0.53
CCBE1-202ENST00000439986 APBB2Q92870 758 aa11.72□□□□□ -0.53
CCBE1-202ENST00000439986 PRMT6Q96LA8 375 aaPredicted RBP11.72□□□□□ -0.53
CCBE1-202ENST00000439986 TRAPPC9Q96Q05 1148 aa11.72□□□□□ -0.53
CCBE1-202ENST00000439986 RNF19AQ9NV58 838 aa11.72□□□□□ -0.53
CCBE1-202ENST00000439986 SLC12A8A0AV02 714 aa11.71□□□□□ -0.53
CCBE1-202ENST00000439986 VSTM5A8MXK1 200 aa11.71□□□□□ -0.53
CCBE1-202ENST00000439986 C19orf81C9J6K1 198 aa11.71□□□□□ -0.53
CCBE1-202ENST00000439986 BHMG1C9JSJ3 638 aaPredicted RBP11.71□□□□□ -0.53
CCBE1-202ENST00000439986 MBP02144 154 aa11.71□□□□□ -0.53
CCBE1-202ENST00000439986 ADRB2P07550 413 aa11.71□□□□□ -0.53
CCBE1-202ENST00000439986 ADSLP30566 484 aaPredicted RBP11.71□□□□□ -0.53
CCBE1-202ENST00000439986 GUCA1AP43080 201 aaPredicted RBP11.71□□□□□ -0.53
CCBE1-202ENST00000439986 SLC1A6P48664 564 aa11.71□□□□□ -0.53
CCBE1-202ENST00000439986 OXCT1P55809 520 aa11.71□□□□□ -0.53
CCBE1-202ENST00000439986 ATP1A4Q13733 1029 aa11.71□□□□□ -0.53
CCBE1-202ENST00000439986 ITGA9Q13797 1035 aa11.71□□□□□ -0.53
CCBE1-202ENST00000439986 MAJINQ3KP22 176 aa11.71□□□□□ -0.53
CCBE1-202ENST00000439986 CTXN3Q4LDR2 81 aa11.71□□□□□ -0.53
CCBE1-202ENST00000439986 FAM76BQ5HYJ3 339 aa11.71□□□□□ -0.53
CCBE1-202ENST00000439986 C3orf58Q8NDZ4 430 aa11.71□□□□□ -0.53
CCBE1-202ENST00000439986 ZNF398Q8TD17 642 aa11.71□□□□□ -0.53
CCBE1-202ENST00000439986 SERAC1Q96JX3 654 aa11.71□□□□□ -0.53
CCBE1-202ENST00000439986 PGLYRP2Q96PD5 576 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms