RNA–Protein interactions for RNA: ENST00000439613.2

HMGB1P37-201, Transcript of high mobility group box 1 pseudogene 37, humanhuman

BASIC

Gene HMGB1P37, Length 609 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P37-201ENST00000439613 PHBP35232 272 aa4.06□□□□□ -1.76
HMGB1P37-201ENST00000439613 GARSP41250 739 aaKnown RBP4.06□□□□□ -1.76
HMGB1P37-201ENST00000439613 MAPKAPK2P49137 400 aa4.06□□□□□ -1.76
HMGB1P37-201ENST00000439613 LMAN1P49257 510 aa4.06□□□□□ -1.76
HMGB1P37-201ENST00000439613 PGFP49763 221 aa4.06□□□□□ -1.76
HMGB1P37-201ENST00000439613 GSK3AP49840 483 aa4.06□□□□□ -1.76
HMGB1P37-201ENST00000439613 YBEYP58557 167 aaPredicted RBP4.06□□□□□ -1.76
HMGB1P37-201ENST00000439613 BASP1P80723 227 aaKnown RBP4.06□□□□□ -1.76
HMGB1P37-201ENST00000439613 PCDH1Q08174 1060 aa4.06□□□□□ -1.76
HMGB1P37-201ENST00000439613 AP1B1Q10567 949 aa4.06□□□□□ -1.76
HMGB1P37-201ENST00000439613 TWF1Q12792 350 aa4.06□□□□□ -1.76
HMGB1P37-201ENST00000439613 SEMA5AQ13591 1074 aa4.06□□□□□ -1.76
HMGB1P37-201ENST00000439613 AUHQ13825 339 aaKnown RBP4.06□□□□□ -1.76
HMGB1P37-201ENST00000439613 SLC29A2Q14542 456 aa4.06□□□□□ -1.76
HMGB1P37-201ENST00000439613 PRPSAP1Q14558 356 aa4.06□□□□□ -1.76
HMGB1P37-201ENST00000439613 KCNJ11Q14654 390 aa4.06□□□□□ -1.76
HMGB1P37-201ENST00000439613 STAT4Q14765 748 aa4.06□□□□□ -1.76
HMGB1P37-201ENST00000439613 SETDB1Q15047 1291 aa4.06□□□□□ -1.76
HMGB1P37-201ENST00000439613 UAP1Q16222 522 aaPredicted RBP4.06□□□□□ -1.76
HMGB1P37-201ENST00000439613 KYNUQ16719 465 aa4.06□□□□□ -1.76
HMGB1P37-201ENST00000439613 ZNF423Q2M1K9 1284 aa4.06□□□□□ -1.76
HMGB1P37-201ENST00000439613 PARP6Q2NL67 630 aa4.06□□□□□ -1.76
HMGB1P37-201ENST00000439613 ANO4Q32M45 955 aa4.06□□□□□ -1.76
HMGB1P37-201ENST00000439613 PARP15Q460N3 678 aa4.06□□□□□ -1.76
HMGB1P37-201ENST00000439613 C5orf22Q49AR2 442 aa4.06□□□□□ -1.76
HMGB1P37-201ENST00000439613 DNAJC21Q5F1R6 531 aaKnown RBP4.06□□□□□ -1.76
HMGB1P37-201ENST00000439613 RABGAP1LQ5R372 815 aa4.06□□□□□ -1.76
HMGB1P37-201ENST00000439613 PPM1LQ5SGD2 360 aa4.06□□□□□ -1.76
HMGB1P37-201ENST00000439613 ANKRD20A2Q5SQ80 823 aa4.06□□□□□ -1.76
HMGB1P37-201ENST00000439613 CEP85LQ5SZL2 805 aa4.06□□□□□ -1.76
HMGB1P37-201ENST00000439613 ANKRD20A1Q5TYW2 823 aa4.06□□□□□ -1.76
HMGB1P37-201ENST00000439613 AGBL2Q5U5Z8 902 aa4.06□□□□□ -1.76
HMGB1P37-201ENST00000439613 MANEALQ5VSG8 457 aa4.06□□□□□ -1.76
HMGB1P37-201ENST00000439613 ANKRD20A3Q5VUR7 823 aa4.06□□□□□ -1.76
HMGB1P37-201ENST00000439613 ARMC3Q5W041 872 aa4.06□□□□□ -1.76
HMGB1P37-201ENST00000439613 TIGD7Q6NT04 549 aaPredicted RBP4.06□□□□□ -1.76
HMGB1P37-201ENST00000439613 LILRA6Q6PI73 481 aa4.06□□□□□ -1.76
HMGB1P37-201ENST00000439613 MIB1Q86YT6 1006 aa4.06□□□□□ -1.76
HMGB1P37-201ENST00000439613 PALM2Q8IXS6 379 aa4.06□□□□□ -1.76
HMGB1P37-201ENST00000439613 CCDC13Q8IYE1 715 aa4.06□□□□□ -1.76
HMGB1P37-201ENST00000439613 UMODL1-AS1Q8N2C9 162 aa4.06□□□□□ -1.76
HMGB1P37-201ENST00000439613 ATPAF2Q8N5M1 289 aa4.06□□□□□ -1.76
HMGB1P37-201ENST00000439613 RTL3Q8N8U3 475 aaKnown RBP4.06□□□□□ -1.76
HMGB1P37-201ENST00000439613 NAT8LQ8N9F0 302 aa4.06□□□□□ -1.76
HMGB1P37-201ENST00000439613 GLIS1Q8NBF1 620 aa4.06□□□□□ -1.76
HMGB1P37-201ENST00000439613 LEMD2Q8NC56 503 aa4.06□□□□□ -1.76
HMGB1P37-201ENST00000439613 KREMEN2Q8NCW0 462 aa4.06□□□□□ -1.76
HMGB1P37-201ENST00000439613 MCUQ8NE86 351 aa4.06□□□□□ -1.76
HMGB1P37-201ENST00000439613 SPPL3Q8TCT6 385 aa4.06□□□□□ -1.76
HMGB1P37-201ENST00000439613 PYROXD1Q8WU10 500 aa4.06□□□□□ -1.76
HMGB1P37-201ENST00000439613 NSMCE1Q8WV22 266 aa4.06□□□□□ -1.76
HMGB1P37-201ENST00000439613 AUTS2Q8WXX7 1259 aa4.06□□□□□ -1.76
HMGB1P37-201ENST00000439613 CPT1BQ92523 772 aa4.06□□□□□ -1.76
HMGB1P37-201ENST00000439613 MRPS31Q92665 395 aaKnown RBP4.06□□□□□ -1.76
HMGB1P37-201ENST00000439613 DPF3Q92784 378 aa4.06□□□□□ -1.76
HMGB1P37-201ENST00000439613 HDAC11Q96DB2 347 aa4.06□□□□□ -1.76
HMGB1P37-201ENST00000439613 LRRC39Q96DD0 335 aa4.06□□□□□ -1.76
HMGB1P37-201ENST00000439613 P2RY11Q96G91 374 aa4.06□□□□□ -1.76
HMGB1P37-201ENST00000439613 SERPINB12Q96P63 405 aa4.06□□□□□ -1.76
HMGB1P37-201ENST00000439613 KLHL5Q96PQ7 755 aa4.06□□□□□ -1.76
HMGB1P37-201ENST00000439613 GCNAQ96QF7 691 aa4.06□□□□□ -1.76
HMGB1P37-201ENST00000439613 NAT9Q9BTE0 207 aa4.06□□□□□ -1.76
HMGB1P37-201ENST00000439613 MAGEB5Q9BZ81 275 aa4.06□□□□□ -1.76
HMGB1P37-201ENST00000439613 SEMA4AQ9H3S1 761 aa4.06□□□□□ -1.76
HMGB1P37-201ENST00000439613 PRDM12Q9H4Q4 367 aa4.06□□□□□ -1.76
HMGB1P37-201ENST00000439613 CCSER2Q9H7U1 834 aa4.06□□□□□ -1.76
HMGB1P37-201ENST00000439613 ZFYVE1Q9HBF4 777 aa4.06□□□□□ -1.76
HMGB1P37-201ENST00000439613 SAYSD1Q9NPB0 183 aa4.06□□□□□ -1.76
HMGB1P37-201ENST00000439613 ANLNQ9NQW6 1124 aa4.06□□□□□ -1.76
HMGB1P37-201ENST00000439613 ENTPD7Q9NQZ7 604 aa4.06□□□□□ -1.76
HMGB1P37-201ENST00000439613 EIF2B3Q9NR50 452 aaKnown RBP4.06□□□□□ -1.76
HMGB1P37-201ENST00000439613 TLR9Q9NR96 1032 aa4.06□□□□□ -1.76
HMGB1P37-201ENST00000439613 ETNK2Q9NVF9 386 aa4.06□□□□□ -1.76
HMGB1P37-201ENST00000439613 TMEM248Q9NWD8 314 aa4.06□□□□□ -1.76
HMGB1P37-201ENST00000439613 GOLGA6AQ9NYA3 693 aa4.06□□□□□ -1.76
HMGB1P37-201ENST00000439613 IGSF9Q9P2J2 1179 aa4.06□□□□□ -1.76
HMGB1P37-201ENST00000439613 GPN3Q9UHW5 284 aaPredicted RBP4.06□□□□□ -1.76
HMGB1P37-201ENST00000439613 XPO7Q9UIA9 1087 aaKnown RBP4.06□□□□□ -1.76
HMGB1P37-201ENST00000439613 NUDT5Q9UKK9 219 aa4.06□□□□□ -1.76
HMGB1P37-201ENST00000439613 ZNF510Q9Y2H8 683 aa4.06□□□□□ -1.76
HMGB1P37-201ENST00000439613 PCDHA11Q9Y5I1 949 aa4.06□□□□□ -1.76
HMGB1P37-201ENST00000439613 HS3ST4Q9Y661 456 aa4.06□□□□□ -1.76
HMGB1P37-201ENST00000439613 CHD5Q8TDI0 1954 aa4.05□□□□□ -1.76
HMGB1P37-201ENST00000439613 OBSL1O75147 1896 aa4.05□□□□□ -1.76
HMGB1P37-201ENST00000439613 PDE4DIPQ5VU43 2346 aa4.05□□□□□ -1.76
HMGB1P37-201ENST00000439613 TRAV19A0A0A6YYK7 116 aa4.05□□□□□ -1.76
HMGB1P37-201ENST00000439613 MAGEB16A2A368 324 aa4.05□□□□□ -1.76
HMGB1P37-201ENST00000439613 TYW5A2RUC4 315 aaKnown RBP4.05□□□□□ -1.76
HMGB1P37-201ENST00000439613 LINC01553A4QN01 128 aa4.05□□□□□ -1.76
HMGB1P37-201ENST00000439613 SDR42E2A6NKP2 422 aa4.05□□□□□ -1.76
HMGB1P37-201ENST00000439613 E7ESA3 106 aa4.05□□□□□ -1.76
HMGB1P37-201ENST00000439613 F5H5T6 163 aa4.05□□□□□ -1.76
HMGB1P37-201ENST00000439613 H0YGN5 161 aa4.05□□□□□ -1.76
HMGB1P37-201ENST00000439613 I6L893 689 aaPredicted RBP4.05□□□□□ -1.76
HMGB1P37-201ENST00000439613 AGPSO00116 658 aa4.05□□□□□ -1.76
HMGB1P37-201ENST00000439613 DFFAO00273 331 aa4.05□□□□□ -1.76
HMGB1P37-201ENST00000439613 SOX1O00570 391 aaPredicted RBP4.05□□□□□ -1.76
HMGB1P37-201ENST00000439613 TRDMT1O14717 391 aaKnown RBP4.05□□□□□ -1.76
HMGB1P37-201ENST00000439613 RASGRF2O14827 1237 aa4.05□□□□□ -1.76
HMGB1P37-201ENST00000439613 MATN3O15232 486 aa4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms