RNA–Protein interactions for RNA: ENST00000439247.2

PCNX3-202, Transcript of pecanex 3, humanhuman

TSL 1 (best)

Gene PCNX3, Length 3,104 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX3-202ENST00000439247 CLEC14AQ86T13 490 aa13.75□□□□□ -0.21
PCNX3-202ENST00000439247 SAPCD2Q86UD0 394 aa13.75□□□□□ -0.21
PCNX3-202ENST00000439247 RIOX2Q8IUF8 465 aa13.75□□□□□ -0.21
PCNX3-202ENST00000439247 CXorf38Q8TB03 319 aa13.75□□□□□ -0.21
PCNX3-202ENST00000439247 HMGCLL1Q8TB92 370 aa13.75□□□□□ -0.21
PCNX3-202ENST00000439247 PLGRKTQ9HBL7 147 aa13.75□□□□□ -0.21
PCNX3-202ENST00000439247 IARS2Q9NSE4 1012 aaKnown RBP13.75□□□□□ -0.21
PCNX3-202ENST00000439247 UBP1Q9NZI7 540 aa13.75□□□□□ -0.21
PCNX3-202ENST00000439247 PADI4Q9UM07 663 aa13.75□□□□□ -0.21
PCNX3-202ENST00000439247 NME7Q9Y5B8 376 aa13.75□□□□□ -0.21
PCNX3-202ENST00000439247 CEP350Q5VT06 3117 aa13.75□□□□□ -0.21
PCNX3-202ENST00000439247 KPNA7A9QM74 516 aa13.75□□□□□ -0.21
PCNX3-202ENST00000439247 MDM4O15151 490 aa13.75□□□□□ -0.21
PCNX3-202ENST00000439247 TPST1O60507 370 aa13.75□□□□□ -0.21
PCNX3-202ENST00000439247 MAFO75444 373 aaPredicted RBP13.75□□□□□ -0.21
PCNX3-202ENST00000439247 LCP1P13796 627 aa13.75□□□□□ -0.21
PCNX3-202ENST00000439247 HNRNPLP14866 589 aaKnown RBP eCLIP13.75□□□□□ -0.21
PCNX3-202ENST00000439247 UBA1P22314 1058 aaKnown RBP13.75□□□□□ -0.21
PCNX3-202ENST00000439247 CD97P48960 835 aa13.75□□□□□ -0.21
PCNX3-202ENST00000439247 GRM3Q14832 879 aa13.75□□□□□ -0.21
PCNX3-202ENST00000439247 PPP1R3AQ16821 1122 aa13.75□□□□□ -0.21
PCNX3-202ENST00000439247 TMEM126BQ8IUX1 230 aa13.75□□□□□ -0.21
PCNX3-202ENST00000439247 C7orf31Q8N865 590 aa13.75□□□□□ -0.21
PCNX3-202ENST00000439247 CPB2Q96IY4 423 aa13.75□□□□□ -0.21
PCNX3-202ENST00000439247 DRC3Q9H069 523 aa13.75□□□□□ -0.21
PCNX3-202ENST00000439247 PTPRHQ9HD43 1115 aa13.75□□□□□ -0.21
PCNX3-202ENST00000439247 CHRAC1Q9NRG0 131 aa13.75□□□□□ -0.21
PCNX3-202ENST00000439247 SLC38A7Q9NVC3 462 aa13.75□□□□□ -0.21
PCNX3-202ENST00000439247 CCDC167Q9P0B6 97 aa13.75□□□□□ -0.21
PCNX3-202ENST00000439247 A0A1W2PPW3 197 aa13.74□□□□□ -0.21
PCNX3-202ENST00000439247 NEMP2A6NFY4 417 aa13.74□□□□□ -0.21
PCNX3-202ENST00000439247 TRIM38O00635 465 aa13.74□□□□□ -0.21
PCNX3-202ENST00000439247 SPRP35270 261 aaPredicted RBP13.74□□□□□ -0.21
PCNX3-202ENST00000439247 SOX11P35716 441 aa13.74□□□□□ -0.21
PCNX3-202ENST00000439247 MAGEA12P43365 314 aa13.74□□□□□ -0.21
PCNX3-202ENST00000439247 CLCN3P51790 818 aa13.74□□□□□ -0.21
PCNX3-202ENST00000439247 PFKPQ01813 784 aa13.74□□□□□ -0.21
PCNX3-202ENST00000439247 SURF1Q15526 300 aa13.74□□□□□ -0.21
PCNX3-202ENST00000439247 DPYSL2Q16555 572 aa13.74□□□□□ -0.21
PCNX3-202ENST00000439247 XRRA1Q6P2D8 792 aa13.74□□□□□ -0.21
PCNX3-202ENST00000439247 CHSY3Q70JA7 882 aa13.74□□□□□ -0.21
PCNX3-202ENST00000439247 PID1Q7Z2X4 250 aa13.74□□□□□ -0.21
PCNX3-202ENST00000439247 DLG3Q92796 817 aa13.74□□□□□ -0.21
PCNX3-202ENST00000439247 RPL10LQ96L21 214 aaKnown RBP13.74□□□□□ -0.21
PCNX3-202ENST00000439247 TNFRSF12AQ9NP84 129 aa13.74□□□□□ -0.21
PCNX3-202ENST00000439247 VPS28Q9UK41 221 aa13.74□□□□□ -0.21
PCNX3-202ENST00000439247 CNOT6Q9ULM6 557 aaKnown RBP13.74□□□□□ -0.21
PCNX3-202ENST00000439247 TMEM114B3SHH9 223 aa13.74□□□□□ -0.21
PCNX3-202ENST00000439247 J3QRK9 145 aa13.74□□□□□ -0.21
PCNX3-202ENST00000439247 GRM5P41594 1212 aa13.74□□□□□ -0.21
PCNX3-202ENST00000439247 ATP1A4Q13733 1029 aa13.74□□□□□ -0.21
PCNX3-202ENST00000439247 TRIM25Q14258 630 aaKnown RBP13.74□□□□□ -0.21
PCNX3-202ENST00000439247 TGFBIQ15582 683 aa13.74□□□□□ -0.21
PCNX3-202ENST00000439247 FGD3Q5JSP0 725 aa13.74□□□□□ -0.21
PCNX3-202ENST00000439247 LCLAT1Q6UWP7 414 aa13.74□□□□□ -0.21
PCNX3-202ENST00000439247 ZBTB49Q6ZSB9 765 aa13.74□□□□□ -0.21
PCNX3-202ENST00000439247 GPR141Q7Z602 305 aa13.74□□□□□ -0.21
PCNX3-202ENST00000439247 GPR180Q86V85 440 aa13.74□□□□□ -0.21
PCNX3-202ENST00000439247 RASAL3Q86YV0 1011 aa13.74□□□□□ -0.21
PCNX3-202ENST00000439247 DNAAF3Q8N9W5 541 aa13.74□□□□□ -0.21
PCNX3-202ENST00000439247 OR9I1Q8NGQ6 314 aa13.74□□□□□ -0.21
PCNX3-202ENST00000439247 FBXL8Q96CD0 374 aa13.74□□□□□ -0.21
PCNX3-202ENST00000439247 ZIC5Q96T25 663 aa13.74□□□□□ -0.21
PCNX3-202ENST00000439247 MRPL45Q9BRJ2 306 aaKnown RBP13.74□□□□□ -0.21
PCNX3-202ENST00000439247 OSBPL11Q9BXB4 747 aa13.74□□□□□ -0.21
PCNX3-202ENST00000439247 MUC3BQ9H195 1237 aa13.74□□□□□ -0.21
PCNX3-202ENST00000439247 TRPC7Q9HCX4 862 aa13.74□□□□□ -0.21
PCNX3-202ENST00000439247 SELENONQ9NZV5 590 aa13.74□□□□□ -0.21
PCNX3-202ENST00000439247 RUVBL2Q9Y230 463 aaKnown RBP13.74□□□□□ -0.21
PCNX3-202ENST00000439247 ZCWPW2A0A1B0GU75 182 aa13.73□□□□□ -0.21
PCNX3-202ENST00000439247 FBP2O00757 339 aa13.73□□□□□ -0.21
PCNX3-202ENST00000439247 STAG3L1P0CL83 205 aa13.73□□□□□ -0.21
PCNX3-202ENST00000439247 EFNA5P52803 228 aa13.73□□□□□ -0.21
PCNX3-202ENST00000439247 LY6KQ17RY6 165 aa13.73□□□□□ -0.21
PCNX3-202ENST00000439247 GPR107Q5VW38 600 aa13.73□□□□□ -0.21
PCNX3-202ENST00000439247 ZNF280DQ6N043 979 aa13.73□□□□□ -0.21
PCNX3-202ENST00000439247 ZBTB8OSQ8IWT0 167 aa13.73□□□□□ -0.21
PCNX3-202ENST00000439247 ALDH16A1Q8IZ83 802 aa13.73□□□□□ -0.21
PCNX3-202ENST00000439247 PNPLA1Q8N8W4 532 aa13.73□□□□□ -0.21
PCNX3-202ENST00000439247 VPS39Q96JC1 886 aa13.73□□□□□ -0.21
PCNX3-202ENST00000439247 MAML3Q96JK9 1138 aa13.73□□□□□ -0.21
PCNX3-202ENST00000439247 YIPF2Q9BWQ6 316 aa13.73□□□□□ -0.21
PCNX3-202ENST00000439247 TRIM8Q9BZR9 551 aa13.73□□□□□ -0.21
PCNX3-202ENST00000439247 PRDM12Q9H4Q4 367 aa13.73□□□□□ -0.21
PCNX3-202ENST00000439247 SOX17Q9H6I2 414 aaPredicted RBP13.73□□□□□ -0.21
PCNX3-202ENST00000439247 PNPLA3Q9NST1 481 aa13.73□□□□□ -0.21
PCNX3-202ENST00000439247 TUBGCP4Q9UGJ1 667 aa13.73□□□□□ -0.21
PCNX3-202ENST00000439247 BARX2Q9UMQ3 279 aaPredicted RBP13.73□□□□□ -0.21
PCNX3-202ENST00000439247 HTTP42858 3142 aa13.73□□□□□ -0.21
PCNX3-202ENST00000439247 MLNP12872 115 aa13.73□□□□□ -0.21
PCNX3-202ENST00000439247 CCDC130P13994 396 aa13.73□□□□□ -0.21
PCNX3-202ENST00000439247 YAP1P46937 504 aaKnown RBP13.73□□□□□ -0.21
PCNX3-202ENST00000439247 YBX1P67809 324 aaKnown RBP13.73□□□□□ -0.21
PCNX3-202ENST00000439247 ADRM1Q16186 407 aa13.73□□□□□ -0.21
PCNX3-202ENST00000439247 DCAF6Q58WW2 860 aa13.73□□□□□ -0.21
PCNX3-202ENST00000439247 MAMDC4Q6UXC1 1216 aa13.73□□□□□ -0.21
PCNX3-202ENST00000439247 RNF168Q8IYW5 571 aaPredicted RBP13.73□□□□□ -0.21
PCNX3-202ENST00000439247 CPSF7Q8N684 471 aaKnown RBP13.73□□□□□ -0.21
PCNX3-202ENST00000439247 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.73□□□□□ -0.21
PCNX3-202ENST00000439247 CANT1Q8WVQ1 401 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms