RNA–Protein interactions for RNA: ENST00000439211.6

DHFR-201, Transcript of dihydrofolate reductase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DHFR, Length 3,917 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-201ENST00000439211 KBTBD6Q86V97 674 aa16.01■□□□□ 0.15
DHFR-201ENST00000439211 DNERQ8NFT8 737 aa16.01■□□□□ 0.15
DHFR-201ENST00000439211 TNIP2Q8NFZ5 429 aa16.01■□□□□ 0.15
DHFR-201ENST00000439211 CCDC90BQ9GZT6 254 aa16.01■□□□□ 0.15
DHFR-201ENST00000439211 FAM96AQ9H5X1 160 aa16.01■□□□□ 0.15
DHFR-201ENST00000439211 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.01■□□□□ 0.152e-8■□□□□ 10.2
DHFR-201ENST00000439211 WDR70Q9NW82 654 aa16.01■□□□□ 0.15
DHFR-201ENST00000439211 GDAP2Q9NXN4 497 aa16.01■□□□□ 0.15
DHFR-201ENST00000439211 STMN3Q9NZ72 180 aa16.01■□□□□ 0.15
DHFR-201ENST00000439211 KLHL8Q9P2G9 620 aaPredicted RBP16.01■□□□□ 0.15
DHFR-201ENST00000439211 KLHL3Q9UH77 587 aa16.01■□□□□ 0.15
DHFR-201ENST00000439211 PCDHGC3Q9UN70 934 aa16.01■□□□□ 0.15
DHFR-201ENST00000439211 FIS1Q9Y3D6 152 aa16.01■□□□□ 0.15
DHFR-201ENST00000439211 YWHAZP63104 245 aaKnown RBP16.01■□□□□ 0.15
DHFR-201ENST00000439211 APOFQ13790 326 aa16.01■□□□□ 0.15
DHFR-201ENST00000439211 MAPRE1Q15691 268 aaKnown RBP16.01■□□□□ 0.15
DHFR-201ENST00000439211 KCNT2Q6UVM3 1135 aa16.01■□□□□ 0.15
DHFR-201ENST00000439211 ADCK1Q86TW2 530 aa16.01■□□□□ 0.15
DHFR-201ENST00000439211 BPHLQ86WA6 291 aaPredicted RBP16.01■□□□□ 0.15
DHFR-201ENST00000439211 TBC1D15Q8TC07 691 aa16.01■□□□□ 0.15
DHFR-201ENST00000439211 FNIP1Q8TF40 1166 aa16.01■□□□□ 0.15
DHFR-201ENST00000439211 IRF2BPLQ9H1B7 796 aa16.01■□□□□ 0.15
DHFR-201ENST00000439211 DPP3Q9NY33 737 aa16.01■□□□□ 0.15
DHFR-201ENST00000439211 WDR27A2RRH5 827 aa16.01■□□□□ 0.15
DHFR-201ENST00000439211 TBKBP1A7MCY6 615 aa16.01■□□□□ 0.15
DHFR-201ENST00000439211 HOXC6P09630 235 aa16.01■□□□□ 0.15
DHFR-201ENST00000439211 XRCC1P18887 633 aaPredicted RBP16.01■□□□□ 0.15
DHFR-201ENST00000439211 AOC1P19801 751 aa16.01■□□□□ 0.15
DHFR-201ENST00000439211 TNFAIP2Q03169 654 aa16.01■□□□□ 0.15
DHFR-201ENST00000439211 UBE2UQ5VVX9 321 aa16.01■□□□□ 0.15
DHFR-201ENST00000439211 PRR23BQ6ZRT6 265 aa16.01■□□□□ 0.15
DHFR-201ENST00000439211 CYP2U1Q7Z449 544 aa16.01■□□□□ 0.15
DHFR-201ENST00000439211 LZTR1Q8N653 840 aa16.01■□□□□ 0.15
DHFR-201ENST00000439211 PLD5Q8N7P1 536 aa16.01■□□□□ 0.15
DHFR-201ENST00000439211 SLC4A11Q8NBS3 891 aa16.01■□□□□ 0.15
DHFR-201ENST00000439211 FAM156AQ8NDB6 213 aa16.01■□□□□ 0.15
DHFR-201ENST00000439211 TEPSINQ96N21 525 aa16.01■□□□□ 0.15
DHFR-201ENST00000439211 CTRCQ99895 268 aa16.01■□□□□ 0.15
DHFR-201ENST00000439211 SNRNP25Q9BV90 132 aaKnown RBP16.01■□□□□ 0.15
DHFR-201ENST00000439211 CHID1Q9BWS9 393 aa16.01■□□□□ 0.15
DHFR-201ENST00000439211 SLC4A5Q9BY07 1137 aa16.01■□□□□ 0.15
DHFR-201ENST00000439211 H3BNH8 94 aa16■□□□□ 0.15
DHFR-201ENST00000439211 PHGDHO43175 533 aaKnown RBP16■□□□□ 0.15
DHFR-201ENST00000439211 ABCG1P45844 678 aa16■□□□□ 0.15
DHFR-201ENST00000439211 MTX3Q5HYI7 312 aa16■□□□□ 0.15
DHFR-201ENST00000439211 N4BP2L1Q5TBK1 243 aaPredicted RBP16■□□□□ 0.15
DHFR-201ENST00000439211 IGFN1Q86VF2 1251 aa16■□□□□ 0.15
DHFR-201ENST00000439211 ELMOD2Q8IZ81 293 aa16■□□□□ 0.15
DHFR-201ENST00000439211 CADM3Q8N126 398 aa16■□□□□ 0.15
DHFR-201ENST00000439211 TRUB1Q8WWH5 349 aaKnown RBP16■□□□□ 0.15
DHFR-201ENST00000439211 RNF34Q969K3 372 aa16■□□□□ 0.15
DHFR-201ENST00000439211 STN1Q9H668 368 aaKnown RBP16■□□□□ 0.15
DHFR-201ENST00000439211 NCKIPSDQ9NZQ3 722 aa16■□□□□ 0.15
DHFR-201ENST00000439211 STK39Q9UEW8 545 aa16■□□□□ 0.15
DHFR-201ENST00000439211 GARSP41250 739 aaKnown RBP16■□□□□ 0.15
DHFR-201ENST00000439211 SLC1A6P48664 564 aa16■□□□□ 0.15
DHFR-201ENST00000439211 LRRC8EQ6NSJ5 796 aa16■□□□□ 0.15
DHFR-201ENST00000439211 NEK5Q6P3R8 708 aa16■□□□□ 0.15
DHFR-201ENST00000439211 SLC10A4Q96EP9 437 aa16■□□□□ 0.15
DHFR-201ENST00000439211 MED10Q9BTT4 135 aa16■□□□□ 0.15
DHFR-201ENST00000439211 POLE4Q9NR33 117 aa16■□□□□ 0.15
DHFR-201ENST00000439211 GPSM3Q9Y4H4 160 aa16■□□□□ 0.15
DHFR-201ENST00000439211 GPR25O00155 361 aa16■□□□□ 0.15
DHFR-201ENST00000439211 CHADO15335 359 aa16■□□□□ 0.15
DHFR-201ENST00000439211 CLOCKO15516 846 aa16■□□□□ 0.15
DHFR-201ENST00000439211 ZNF132P52740 706 aa16■□□□□ 0.15
DHFR-201ENST00000439211 GBE1Q04446 702 aa16■□□□□ 0.15
DHFR-201ENST00000439211 DLK2Q6UY11 383 aa16■□□□□ 0.15
DHFR-201ENST00000439211 SNX29P2Q8IUI4 249 aa16■□□□□ 0.15
DHFR-201ENST00000439211 ARFGAP1Q8N6T3 406 aa16■□□□□ 0.15
DHFR-201ENST00000439211 SPERTQ8NA61 448 aa16■□□□□ 0.15
DHFR-201ENST00000439211 PPP1R13LQ8WUF5 828 aa16■□□□□ 0.15
DHFR-201ENST00000439211 ATP6V1E2Q96A05 226 aa16■□□□□ 0.15
DHFR-201ENST00000439211 PIWIL1Q96J94 861 aaKnown RBP16■□□□□ 0.15
DHFR-201ENST00000439211 NIFKQ9BYG3 293 aaKnown RBP16■□□□□ 0.15
DHFR-201ENST00000439211 ABCB10Q9NRK6 738 aa16■□□□□ 0.15
DHFR-201ENST00000439211 PRMT7Q9NVM4 692 aaPredicted RBP16■□□□□ 0.15
DHFR-201ENST00000439211 PLLPQ9Y342 182 aa16■□□□□ 0.15
DHFR-201ENST00000439211 PIGRP01833 764 aa16■□□□□ 0.15
DHFR-201ENST00000439211 GRIA1P42261 906 aa16■□□□□ 0.15
DHFR-201ENST00000439211 UNC5AQ6ZN44 842 aa16■□□□□ 0.15
DHFR-201ENST00000439211 USP43Q70EL4 1123 aa16■□□□□ 0.15
DHFR-201ENST00000439211 UNC5BQ8IZJ1 945 aa16■□□□□ 0.15
DHFR-201ENST00000439211 SLC17A6Q9P2U8 582 aa16■□□□□ 0.15
DHFR-201ENST00000439211 SLX4Q8IY92 1834 aa15.99■□□□□ 0.15
DHFR-201ENST00000439211 USP12O75317 370 aa15.99■□□□□ 0.15
DHFR-201ENST00000439211 THOP1P52888 689 aa15.99■□□□□ 0.15
DHFR-201ENST00000439211 PDK2Q15119 407 aa15.99■□□□□ 0.15
DHFR-201ENST00000439211 CATSPER4Q7RTX7 472 aa15.99■□□□□ 0.15
DHFR-201ENST00000439211 DEPDC4Q8N2C3 294 aa15.99■□□□□ 0.15
DHFR-201ENST00000439211 NIPA2Q8N8Q9 360 aa15.99■□□□□ 0.15
DHFR-201ENST00000439211 FLCNQ8NFG4 579 aa15.99■□□□□ 0.15
DHFR-201ENST00000439211 DNAI2Q9GZS0 605 aa15.99■□□□□ 0.15
DHFR-201ENST00000439211 LHX5Q9H2C1 402 aa15.99■□□□□ 0.15
DHFR-201ENST00000439211 MOV10Q9HCE1 1003 aaKnown RBP15.99■□□□□ 0.15
DHFR-201ENST00000439211 PNPOQ9NVS9 261 aa15.99■□□□□ 0.15
DHFR-201ENST00000439211 CKMT2P17540 419 aa15.99■□□□□ 0.15
DHFR-201ENST00000439211 TRIM25Q14258 630 aaKnown RBP15.99■□□□□ 0.15
DHFR-201ENST00000439211 FAM20CQ8IXL6 584 aa15.99■□□□□ 0.15
DHFR-201ENST00000439211 CMASQ8NFW8 434 aaPredicted RBP15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms