RNA–Protein interactions for RNA: ENST00000439120.1

AC004540.1-201, humanhuman

TSL 2 BASIC

Gene AC004540.1, Length 891 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-201ENST00000439120 ADRB3P13945 408 aa18.8■□□□□ 0.6
AC004540.1-201ENST00000439120 ITGB7P26010 798 aa18.8■□□□□ 0.6
AC004540.1-201ENST00000439120 RFC1P35251 1148 aaPredicted RBP18.8■□□□□ 0.6
AC004540.1-201ENST00000439120 ACVRL1P37023 503 aa18.8■□□□□ 0.6
AC004540.1-201ENST00000439120 HDAC4P56524 1084 aa18.8■□□□□ 0.6
AC004540.1-201ENST00000439120 GSCP56915 257 aaPredicted RBP18.8■□□□□ 0.6
AC004540.1-201ENST00000439120 PTP4A2Q12974 167 aa18.8■□□□□ 0.6
AC004540.1-201ENST00000439120 DNAJC3Q13217 504 aa18.8■□□□□ 0.6
AC004540.1-201ENST00000439120 MAPK8IP2Q13387 824 aaPredicted RBP18.8■□□□□ 0.6
AC004540.1-201ENST00000439120 SMAD1Q15797 465 aaKnown RBP18.8■□□□□ 0.6
AC004540.1-201ENST00000439120 ZNF284Q2VY69 593 aa18.8■□□□□ 0.6
AC004540.1-201ENST00000439120 EFHC2Q5JST6 749 aa18.8■□□□□ 0.6
AC004540.1-201ENST00000439120 CCDC183Q5T5S1 534 aa18.8■□□□□ 0.6
AC004540.1-201ENST00000439120 MANEALQ5VSG8 457 aa18.8■□□□□ 0.6
AC004540.1-201ENST00000439120 SCYL2Q6P3W7 929 aa18.8■□□□□ 0.6
AC004540.1-201ENST00000439120 SLFN11Q7Z7L1 901 aa18.8■□□□□ 0.6
AC004540.1-201ENST00000439120 CCDC185Q8N715 623 aa18.8■□□□□ 0.6
AC004540.1-201ENST00000439120 CENPIQ92674 756 aaPredicted RBP18.8■□□□□ 0.6
AC004540.1-201ENST00000439120 ERGIC2Q96RQ1 377 aa18.8■□□□□ 0.6
AC004540.1-201ENST00000439120 AGPAT1Q99943 283 aa18.8■□□□□ 0.6
AC004540.1-201ENST00000439120 CALN1Q9BXU9 219 aa18.8■□□□□ 0.6
AC004540.1-201ENST00000439120 NAT10Q9H0A0 1025 aaKnown RBP18.8■□□□□ 0.6
AC004540.1-201ENST00000439120 MAGEH1Q9H213 219 aa18.8■□□□□ 0.6
AC004540.1-201ENST00000439120 FZD3Q9NPG1 666 aa18.8■□□□□ 0.6
AC004540.1-201ENST00000439120 TMEM248Q9NWD8 314 aa18.8■□□□□ 0.6
AC004540.1-201ENST00000439120 WASF2Q9Y6W5 498 aa18.8■□□□□ 0.6
AC004540.1-201ENST00000439120 DOCK9Q9BZ29 2069 aa18.8■□□□□ 0.6
AC004540.1-201ENST00000439120 CXorf51AA0A1B0GTR3 108 aa18.79■□□□□ 0.6
AC004540.1-201ENST00000439120 FAM72CH0Y354 149 aa18.79■□□□□ 0.6
AC004540.1-201ENST00000439120 ZNF821O75541 412 aaPredicted RBP18.79■□□□□ 0.6
AC004540.1-201ENST00000439120 L1CAMP32004 1257 aa18.79■□□□□ 0.6
AC004540.1-201ENST00000439120 RPS21P63220 83 aaKnown RBP18.79■□□□□ 0.6
AC004540.1-201ENST00000439120 C1QBPQ07021 282 aaKnown RBP18.79■□□□□ 0.6
AC004540.1-201ENST00000439120 ARTNQ5T4W7 220 aa18.79■□□□□ 0.6
AC004540.1-201ENST00000439120 FAM72AQ5TYM5 149 aa18.79■□□□□ 0.6
AC004540.1-201ENST00000439120 SFMBT2Q5VUG0 894 aa18.79■□□□□ 0.6
AC004540.1-201ENST00000439120 SEL1L3Q68CR1 1132 aa18.79■□□□□ 0.6
AC004540.1-201ENST00000439120 FAM72DQ6L9T8 149 aa18.79■□□□□ 0.6
AC004540.1-201ENST00000439120 KIAA1161Q6NSJ0 714 aa18.79■□□□□ 0.6
AC004540.1-201ENST00000439120 WDR59Q6PJI9 974 aa18.79■□□□□ 0.6
AC004540.1-201ENST00000439120 NLRP14Q86W24 1093 aa18.79■□□□□ 0.6
AC004540.1-201ENST00000439120 TMPRSS12Q86WS5 348 aa18.79■□□□□ 0.6
AC004540.1-201ENST00000439120 FAM72BQ86X60 149 aa18.79■□□□□ 0.6
AC004540.1-201ENST00000439120 MARCH9Q86YJ5 346 aa18.79■□□□□ 0.6
AC004540.1-201ENST00000439120 AOPEPQ8N6M6 819 aa18.79■□□□□ 0.6
AC004540.1-201ENST00000439120 TMEM145Q8NBT3 493 aa18.79■□□□□ 0.6
AC004540.1-201ENST00000439120 ARHGEF2Q92974 986 aaKnown RBP18.79■□□□□ 0.6
AC004540.1-201ENST00000439120 NTAN1Q96AB6 310 aa18.79■□□□□ 0.6
AC004540.1-201ENST00000439120 ISG20Q96AZ6 181 aaKnown RBP18.79■□□□□ 0.6
AC004540.1-201ENST00000439120 NDFIP2Q9NV92 336 aa18.79■□□□□ 0.6
AC004540.1-201ENST00000439120 ZZEF1O43149 2961 aa18.78■□□□□ 0.6
AC004540.1-201ENST00000439120 SIGLEC16A6NMB1 481 aa18.78■□□□□ 0.6
AC004540.1-201ENST00000439120 RNF103O00237 685 aa18.78■□□□□ 0.6
AC004540.1-201ENST00000439120 TAF4O00268 1085 aa18.78■□□□□ 0.6
AC004540.1-201ENST00000439120 NEMP1O14524 444 aa18.78■□□□□ 0.6
AC004540.1-201ENST00000439120 CAPNS1P04632 268 aa18.78■□□□□ 0.6
AC004540.1-201ENST00000439120 JUPP14923 745 aa18.78■□□□□ 0.6
AC004540.1-201ENST00000439120 FERP16591 822 aa18.78■□□□□ 0.6
AC004540.1-201ENST00000439120 SNRPD1P62314 119 aaKnown RBP18.78■□□□□ 0.6
AC004540.1-201ENST00000439120 DCUN1D2Q6PH85 259 aa18.78■□□□□ 0.6
AC004540.1-201ENST00000439120 MON1BQ7L1V2 547 aa18.78■□□□□ 0.6
AC004540.1-201ENST00000439120 PTAR1Q7Z6K3 402 aaPredicted RBP18.78■□□□□ 0.6
AC004540.1-201ENST00000439120 PDCD7Q8N8D1 485 aaKnown RBP18.78■□□□□ 0.6
AC004540.1-201ENST00000439120 OR6K2Q8NGY2 324 aa18.78■□□□□ 0.6
AC004540.1-201ENST00000439120 FAM174AQ8TBP5 190 aa18.78■□□□□ 0.6
AC004540.1-201ENST00000439120 FEM1CQ96JP0 617 aa18.78■□□□□ 0.6
AC004540.1-201ENST00000439120 MCEEQ96PE7 176 aa18.78■□□□□ 0.6
AC004540.1-201ENST00000439120 ACTL7AQ9Y615 435 aa18.78■□□□□ 0.6
AC004540.1-201ENST00000439120 FREM2Q5SZK8 3169 aa18.77■□□□□ 0.6
AC004540.1-201ENST00000439120 TRABD2BA6NFA1 517 aa18.77■□□□□ 0.6
AC004540.1-201ENST00000439120 ZSCAN5CA6NGD5 496 aaPredicted RBP18.77■□□□□ 0.6
AC004540.1-201ENST00000439120 LRRC10BA6NIK2 292 aa18.77■□□□□ 0.6
AC004540.1-201ENST00000439120 A6NNZ2 444 aa18.77■□□□□ 0.6
AC004540.1-201ENST00000439120 KRIT1O00522 736 aa18.77■□□□□ 0.6
AC004540.1-201ENST00000439120 CCP110O43303 1012 aa18.77■□□□□ 0.6
AC004540.1-201ENST00000439120 CKMT2P17540 419 aa18.77■□□□□ 0.6
AC004540.1-201ENST00000439120 EPHB2P29323 1055 aa18.77■□□□□ 0.6
AC004540.1-201ENST00000439120 ACADVLP49748 655 aa18.77■□□□□ 0.6
AC004540.1-201ENST00000439120 ZNF143P52747 638 aaPredicted RBP18.77■□□□□ 0.6
AC004540.1-201ENST00000439120 CLDN2P57739 230 aa18.77■□□□□ 0.6
AC004540.1-201ENST00000439120 LEKR1Q6ZMV7 388 aa18.77■□□□□ 0.6
AC004540.1-201ENST00000439120 PARS2Q7L3T8 475 aaKnown RBP18.77■□□□□ 0.6
AC004540.1-201ENST00000439120 ZSCAN30Q86W11 494 aa18.77■□□□□ 0.6
AC004540.1-201ENST00000439120 PLPP6Q8IY26 295 aa18.77■□□□□ 0.6
AC004540.1-201ENST00000439120 OR13H1Q8NG92 308 aa18.77■□□□□ 0.6
AC004540.1-201ENST00000439120 OR2AP1Q8NGE2 309 aa18.77■□□□□ 0.6
AC004540.1-201ENST00000439120 LRIG1Q96JA1 1093 aa18.77■□□□□ 0.6
AC004540.1-201ENST00000439120 EPAS1Q99814 870 aa18.77■□□□□ 0.6
AC004540.1-201ENST00000439120 SLC17A9Q9BYT1 436 aa18.77■□□□□ 0.6
AC004540.1-201ENST00000439120 KLHL11Q9NVR0 708 aa18.77■□□□□ 0.6
AC004540.1-201ENST00000439120 LHX6Q9UPM6 363 aa18.77■□□□□ 0.6
AC004540.1-201ENST00000439120 ZFR2Q9UPR6 939 aaKnown RBP18.77■□□□□ 0.6
AC004540.1-201ENST00000439120 FADS3Q9Y5Q0 445 aa18.77■□□□□ 0.6
AC004540.1-201ENST00000439120 DMXL2Q8TDJ6 3036 aa18.77■□□□□ 0.6
AC004540.1-201ENST00000439120 BUB1O43683 1085 aa18.76■□□□□ 0.59
AC004540.1-201ENST00000439120 AP1G1O43747 822 aa18.76■□□□□ 0.59
AC004540.1-201ENST00000439120 CREB3O43889 395 aa18.76■□□□□ 0.59
AC004540.1-201ENST00000439120 GSRP00390 522 aa18.76■□□□□ 0.59
AC004540.1-201ENST00000439120 TYRO3Q06418 890 aa18.76■□□□□ 0.59
AC004540.1-201ENST00000439120 SGCGQ13326 291 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms