RNA–Protein interactions for RNA: ENST00000438661.2

KCNC4-204, Transcript of potassium voltage-gated channel subfamily C member 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene KCNC4, Length 2,953 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNC4-204ENST00000438661 RTP4Q96DX8 246 aa18.33■□□□□ 0.52
KCNC4-204ENST00000438661 CCDC138Q96M89 665 aa18.33■□□□□ 0.52
KCNC4-204ENST00000438661 TCF12Q99081 682 aa18.33■□□□□ 0.52
KCNC4-204ENST00000438661 GMLQ99445 158 aa18.33■□□□□ 0.52
KCNC4-204ENST00000438661 SNRNP25Q9BV90 132 aaKnown RBP18.33■□□□□ 0.52
KCNC4-204ENST00000438661 QTRT2Q9H974 415 aaKnown RBP18.33■□□□□ 0.52
KCNC4-204ENST00000438661 GTSE1Q9NYZ3 720 aa18.33■□□□□ 0.52
KCNC4-204ENST00000438661 ANKRD12Q6UB98 2062 aa18.33■□□□□ 0.52
KCNC4-204ENST00000438661 ENDOD1O94919 500 aa18.33■□□□□ 0.52
KCNC4-204ENST00000438661 ZBTB7AO95365 584 aa18.33■□□□□ 0.52
KCNC4-204ENST00000438661 NCAM1P13591 858 aa18.33■□□□□ 0.52
KCNC4-204ENST00000438661 KCNA2P16389 499 aa18.33■□□□□ 0.52
KCNC4-204ENST00000438661 EEF1DP29692 281 aaKnown RBP18.33■□□□□ 0.52
KCNC4-204ENST00000438661 ATXN1P54253 815 aaKnown RBP18.33■□□□□ 0.52
KCNC4-204ENST00000438661 DEPDC1Q5TB30 811 aa18.33■□□□□ 0.52
KCNC4-204ENST00000438661 HEXIM2Q96MH2 286 aaKnown RBP18.33■□□□□ 0.52
KCNC4-204ENST00000438661 FCRL3Q96P31 734 aaPredicted RBP18.33■□□□□ 0.52
KCNC4-204ENST00000438661 VPS33BQ9H267 617 aa18.33■□□□□ 0.52
KCNC4-204ENST00000438661 FANCEQ9HB96 536 aa18.33■□□□□ 0.52
KCNC4-204ENST00000438661 IPO11Q9UI26 975 aaKnown RBP18.33■□□□□ 0.52
KCNC4-204ENST00000438661 A6NL46 340 aa18.32■□□□□ 0.52
KCNC4-204ENST00000438661 TMEM114B3SHH9 223 aa18.32■□□□□ 0.52
KCNC4-204ENST00000438661 ZNF701M0R085 212 aaPredicted RBP18.32■□□□□ 0.52
KCNC4-204ENST00000438661 KPNA4O00629 521 aaPredicted RBP18.32■□□□□ 0.52
KCNC4-204ENST00000438661 DYNC1LI2O43237 492 aaPredicted RBP18.32■□□□□ 0.52
KCNC4-204ENST00000438661 MED7O43513 233 aa18.32■□□□□ 0.52
KCNC4-204ENST00000438661 ALDH1A2O94788 518 aa18.32■□□□□ 0.52
KCNC4-204ENST00000438661 MICAL2O94851 1124 aa18.32■□□□□ 0.52
KCNC4-204ENST00000438661 MT-ND1P03886 318 aa18.32■□□□□ 0.52
KCNC4-204ENST00000438661 PSAPP07602 524 aa18.32■□□□□ 0.52
KCNC4-204ENST00000438661 CYP2C9P11712 490 aa18.32■□□□□ 0.52
KCNC4-204ENST00000438661 ASPAP45381 313 aa18.32■□□□□ 0.52
KCNC4-204ENST00000438661 EMC2Q15006 297 aa18.32■□□□□ 0.52
KCNC4-204ENST00000438661 DUOXA2Q1HG44 320 aa18.32■□□□□ 0.52
KCNC4-204ENST00000438661 PIWIL3Q7Z3Z3 882 aaKnown RBP18.32■□□□□ 0.52
KCNC4-204ENST00000438661 URGCPQ8TCY9 931 aa18.32■□□□□ 0.52
KCNC4-204ENST00000438661 ZC3H15Q8WU90 426 aaKnown RBP18.32■□□□□ 0.52
KCNC4-204ENST00000438661 TRUB1Q8WWH5 349 aaKnown RBP18.32■□□□□ 0.52
KCNC4-204ENST00000438661 CERS2Q96G23 380 aa18.32■□□□□ 0.52
KCNC4-204ENST00000438661 UPF3AQ9H1J1 476 aaKnown RBP18.32■□□□□ 0.52
KCNC4-204ENST00000438661 EHD1Q9H4M9 534 aa18.32■□□□□ 0.52
KCNC4-204ENST00000438661 FAM49BQ9NUQ9 324 aa18.32■□□□□ 0.52
KCNC4-204ENST00000438661 OXSMQ9NWU1 459 aa18.32■□□□□ 0.52
KCNC4-204ENST00000438661 HESX1Q9UBX0 185 aa18.32■□□□□ 0.52
KCNC4-204ENST00000438661 WARS2Q9UGM6 360 aaKnown RBP18.32■□□□□ 0.52
KCNC4-204ENST00000438661 TPSB2P20231 275 aa18.32■□□□□ 0.52
KCNC4-204ENST00000438661 TGM2P21980 687 aa18.32■□□□□ 0.52
KCNC4-204ENST00000438661 SLC7A2P52569 658 aa18.32■□□□□ 0.52
KCNC4-204ENST00000438661 TNK2Q07912 1038 aa18.32■□□□□ 0.52
KCNC4-204ENST00000438661 TPSAB1Q15661 275 aa18.32■□□□□ 0.52
KCNC4-204ENST00000438661 CAMK1DQ8IU85 385 aa18.32■□□□□ 0.52
KCNC4-204ENST00000438661 SPPL2CQ8IUH8 684 aa18.32■□□□□ 0.52
KCNC4-204ENST00000438661 CNTD1Q8N815 330 aa18.32■□□□□ 0.52
KCNC4-204ENST00000438661 ZNF420Q8TAQ5 688 aaPredicted RBP18.32■□□□□ 0.52
KCNC4-204ENST00000438661 ATG4CQ96DT6 458 aa18.32■□□□□ 0.52
KCNC4-204ENST00000438661 RNF146Q9NTX7 359 aa18.32■□□□□ 0.52
KCNC4-204ENST00000438661 TUBA8Q9NY65 449 aaPredicted RBP18.32■□□□□ 0.52
KCNC4-204ENST00000438661 SUN2Q9UH99 717 aa18.32■□□□□ 0.52
KCNC4-204ENST00000438661 DLGAP1O14490 977 aa18.31■□□□□ 0.52
KCNC4-204ENST00000438661 PAPSS1O43252 624 aaPredicted RBP18.31■□□□□ 0.52
KCNC4-204ENST00000438661 POLBP06746 335 aa18.31■□□□□ 0.52
KCNC4-204ENST00000438661 HNRNPLP14866 589 aaKnown RBP eCLIP18.31■□□□□ 0.52
KCNC4-204ENST00000438661 PGAM1P18669 254 aa18.31■□□□□ 0.52
KCNC4-204ENST00000438661 CCND2P30279 289 aa18.31■□□□□ 0.52
KCNC4-204ENST00000438661 SPRP35270 261 aaPredicted RBP18.31■□□□□ 0.52
KCNC4-204ENST00000438661 MAGEA6P43360 314 aa18.31■□□□□ 0.52
KCNC4-204ENST00000438661 NKX2-5P52952 324 aaPredicted RBP18.31■□□□□ 0.52
KCNC4-204ENST00000438661 RAD23AP54725 363 aa18.31■□□□□ 0.52
KCNC4-204ENST00000438661 ACTR2P61160 394 aa18.31■□□□□ 0.52
KCNC4-204ENST00000438661 Q8N9G6 341 aaPredicted RBP18.31■□□□□ 0.52
KCNC4-204ENST00000438661 OR9I1Q8NGQ6 314 aa18.31■□□□□ 0.52
KCNC4-204ENST00000438661 NSMCE3Q96MG7 304 aa18.31■□□□□ 0.52
KCNC4-204ENST00000438661 JPH1Q9HDC5 661 aaPredicted RBP18.31■□□□□ 0.52
KCNC4-204ENST00000438661 ZNF277Q9NRM2 450 aaPredicted RBP18.31■□□□□ 0.52
KCNC4-204ENST00000438661 SUCOQ9UBS9 1254 aaKnown RBP18.31■□□□□ 0.52
KCNC4-204ENST00000438661 PGAP2Q9UHJ9 254 aa18.31■□□□□ 0.52
KCNC4-204ENST00000438661 CROTQ9UKG9 612 aa18.31■□□□□ 0.52
KCNC4-204ENST00000438661 OAZ3Q9UMX2 235 aa18.31■□□□□ 0.52
KCNC4-204ENST00000438661 NOX1Q9Y5S8 564 aa18.31■□□□□ 0.52
KCNC4-204ENST00000438661 SNAP91O60641 907 aa18.31■□□□□ 0.52
KCNC4-204ENST00000438661 GMNNO75496 209 aa18.31■□□□□ 0.52
KCNC4-204ENST00000438661 IDUAP35475 653 aa18.31■□□□□ 0.52
KCNC4-204ENST00000438661 POLR2IP36954 125 aaKnown RBP18.31■□□□□ 0.52
KCNC4-204ENST00000438661 OPRL1P41146 370 aa18.31■□□□□ 0.52
KCNC4-204ENST00000438661 RPS27LQ71UM5 84 aaKnown RBP18.31■□□□□ 0.52
KCNC4-204ENST00000438661 PIGZQ86VD9 579 aa18.31■□□□□ 0.52
KCNC4-204ENST00000438661 CPSF7Q8N684 471 aaKnown RBP18.31■□□□□ 0.52
KCNC4-204ENST00000438661 CCNYQ8ND76 341 aa18.31■□□□□ 0.52
KCNC4-204ENST00000438661 C1orf50Q9BV19 199 aa18.31■□□□□ 0.52
KCNC4-204ENST00000438661 TRIM8Q9BZR9 551 aa18.31■□□□□ 0.52
KCNC4-204ENST00000438661 UNC93B1Q9H1C4 597 aa18.31■□□□□ 0.52
KCNC4-204ENST00000438661 GBA3Q9H227 469 aa18.31■□□□□ 0.52
KCNC4-204ENST00000438661 RPAP3Q9H6T3 665 aaPredicted RBP18.31■□□□□ 0.52
KCNC4-204ENST00000438661 CPQQ9Y646 472 aa18.31■□□□□ 0.52
KCNC4-204ENST00000438661 V9GYQ6 96 aa18.31■□□□□ 0.52
KCNC4-204ENST00000438661 GCATO75600 419 aa18.3■□□□□ 0.52
KCNC4-204ENST00000438661 GSSP48637 474 aa18.3■□□□□ 0.52
KCNC4-204ENST00000438661 MAPK11Q15759 364 aa18.3■□□□□ 0.52
KCNC4-204ENST00000438661 FAM183BPQ6ZVS7 135 aa18.3■□□□□ 0.52
KCNC4-204ENST00000438661 PCYOX1LQ8NBM8 494 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms