RNA–Protein interactions for RNA: ENST00000438362.6

CSDE1-205, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 4,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-205ENST00000438362 OVOS1Q6IE37 1185 aa6.77□□□□□ -1.33
CSDE1-205ENST00000438362 UGT3A1Q6NUS8 523 aa6.77□□□□□ -1.33
CSDE1-205ENST00000438362 TTC30AQ86WT1 665 aa6.77□□□□□ -1.33
CSDE1-205ENST00000438362 SEPT5Q99719 369 aaPredicted RBP6.77□□□□□ -1.33
CSDE1-205ENST00000438362 GPR63Q9BZJ6 419 aa6.77□□□□□ -1.33
CSDE1-205ENST00000438362 PIF1Q9H611 641 aa6.77□□□□□ -1.33
CSDE1-205ENST00000438362 CASS4Q9NQ75 786 aa6.77□□□□□ -1.33
CSDE1-205ENST00000438362 CNGB3Q9NQW8 809 aa6.77□□□□□ -1.33
CSDE1-205ENST00000438362 EIF2B3Q9NR50 452 aaKnown RBP6.77□□□□□ -1.33
CSDE1-205ENST00000438362 SCN3BQ9NY72 215 aa6.77□□□□□ -1.33
CSDE1-205ENST00000438362 GNEQ9Y223 722 aaKnown RBP6.77□□□□□ -1.33
CSDE1-205ENST00000438362 CRYL1Q9Y2S2 319 aa6.77□□□□□ -1.33
CSDE1-205ENST00000438362 PRG3Q9Y2Y8 225 aaPredicted RBP6.77□□□□□ -1.33
CSDE1-205ENST00000438362 MTF2Q9Y483 593 aaPredicted RBP6.77□□□□□ -1.33
CSDE1-205ENST00000438362 MRPL42Q9Y6G3 142 aaKnown RBP6.77□□□□□ -1.33
CSDE1-205ENST00000438362 ATP6AP2A0A1C7CYW4 349 aa6.76□□□□□ -1.33
CSDE1-205ENST00000438362 MYO1GB0I1T2 1018 aa6.76□□□□□ -1.33
CSDE1-205ENST00000438362 DPYSL4O14531 572 aa6.76□□□□□ -1.33
CSDE1-205ENST00000438362 GPR182O15218 404 aa6.76□□□□□ -1.33
CSDE1-205ENST00000438362 FGF10O15520 208 aaPredicted RBP6.76□□□□□ -1.33
CSDE1-205ENST00000438362 MAP3K13O43283 966 aa6.76□□□□□ -1.33
CSDE1-205ENST00000438362 PEX10O60683 326 aa6.76□□□□□ -1.33
CSDE1-205ENST00000438362 ATP6AP2O75787 350 aa6.76□□□□□ -1.33
CSDE1-205ENST00000438362 MYO1DO94832 1006 aa6.76□□□□□ -1.33
CSDE1-205ENST00000438362 SERPINF2P08697 491 aa6.76□□□□□ -1.33
CSDE1-205ENST00000438362 LBPP18428 481 aa6.76□□□□□ -1.33
CSDE1-205ENST00000438362 AOC1P19801 751 aa6.76□□□□□ -1.33
CSDE1-205ENST00000438362 L1CAMP32004 1257 aa6.76□□□□□ -1.33
CSDE1-205ENST00000438362 ATXN1P54253 815 aaKnown RBP6.76□□□□□ -1.33
CSDE1-205ENST00000438362 GRM3Q14832 879 aa6.76□□□□□ -1.33
CSDE1-205ENST00000438362 MFSD14CQ5VZR4 134 aa6.76□□□□□ -1.33
CSDE1-205ENST00000438362 TLDC1Q6P9B6 456 aa6.76□□□□□ -1.33
CSDE1-205ENST00000438362 PLD3Q8IV08 490 aa6.76□□□□□ -1.33
CSDE1-205ENST00000438362 UBR7Q8N806 425 aa6.76□□□□□ -1.33
CSDE1-205ENST00000438362 ACTRT2Q8TDY3 377 aa6.76□□□□□ -1.33
CSDE1-205ENST00000438362 NAT14Q8WUY8 206 aa6.76□□□□□ -1.33
CSDE1-205ENST00000438362 NDRG1Q92597 394 aaKnown RBP6.76□□□□□ -1.33
CSDE1-205ENST00000438362 ZNF512Q96ME7 567 aaPredicted RBP6.76□□□□□ -1.33
CSDE1-205ENST00000438362 PANX3Q96QZ0 392 aa6.76□□□□□ -1.33
CSDE1-205ENST00000438362 GAD1Q99259 594 aa6.76□□□□□ -1.33
CSDE1-205ENST00000438362 APOL5Q9BWW9 433 aa6.76□□□□□ -1.33
CSDE1-205ENST00000438362 BCO2Q9BYV7 579 aa6.76□□□□□ -1.33
CSDE1-205ENST00000438362 NXF3Q9H4D5 531 aaKnown RBP6.76□□□□□ -1.33
CSDE1-205ENST00000438362 ACSS2Q9NR19 701 aa6.76□□□□□ -1.33
CSDE1-205ENST00000438362 PNPLA3Q9NST1 481 aa6.76□□□□□ -1.33
CSDE1-205ENST00000438362 CHCHD3Q9NX63 227 aaKnown RBP6.76□□□□□ -1.33
CSDE1-205ENST00000438362 UTP6Q9NYH9 597 aaKnown RBP6.76□□□□□ -1.33
CSDE1-205ENST00000438362 TAS2R13Q9NYV9 303 aa6.76□□□□□ -1.33
CSDE1-205ENST00000438362 SIRPGQ9P1W8 387 aa6.76□□□□□ -1.33
CSDE1-205ENST00000438362 RAB26Q9ULW5 256 aa6.76□□□□□ -1.33
CSDE1-205ENST00000438362 EIF3LQ9Y262 564 aaKnown RBP6.76□□□□□ -1.33
CSDE1-205ENST00000438362 EVPLLA8MZ36 301 aa6.76□□□□□ -1.33
CSDE1-205ENST00000438362 ADM5C9JUS6 153 aa6.76□□□□□ -1.33
CSDE1-205ENST00000438362 ITM2AO43736 263 aa6.76□□□□□ -1.33
CSDE1-205ENST00000438362 RAMP2O60895 175 aa6.76□□□□□ -1.33
CSDE1-205ENST00000438362 FKBP9O95302 570 aa6.76□□□□□ -1.33
CSDE1-205ENST00000438362 HIST1H2AGP0C0S8 130 aaPredicted RBP6.76□□□□□ -1.33
CSDE1-205ENST00000438362 HIST1H2ADP20671 130 aa6.76□□□□□ -1.33
CSDE1-205ENST00000438362 ATP6V1B2P21281 511 aa6.76□□□□□ -1.33
CSDE1-205ENST00000438362 AKT1P31749 480 aa6.76□□□□□ -1.33
CSDE1-205ENST00000438362 TTKP33981 857 aa6.76□□□□□ -1.33
CSDE1-205ENST00000438362 PPM1FP49593 454 aaPredicted RBP6.76□□□□□ -1.33
CSDE1-205ENST00000438362 NUMBP49757 651 aa6.76□□□□□ -1.33
CSDE1-205ENST00000438362 CDK18Q07002 472 aa6.76□□□□□ -1.33
CSDE1-205ENST00000438362 PCBP1Q15365 356 aaKnown RBP eCLIP6.76□□□□□ -1.33
CSDE1-205ENST00000438362 NR6A1Q15406 480 aa6.76□□□□□ -1.33
CSDE1-205ENST00000438362 TAF1CQ15572 869 aaPredicted RBP6.76□□□□□ -1.33
CSDE1-205ENST00000438362 NEDD8Q15843 81 aa6.76□□□□□ -1.33
CSDE1-205ENST00000438362 LSM12Q3MHD2 195 aaKnown RBP6.76□□□□□ -1.33
CSDE1-205ENST00000438362 ACBD5Q5T8D3 534 aaPredicted RBP6.76□□□□□ -1.33
CSDE1-205ENST00000438362 FKBP9P1Q75LS8 142 aa6.76□□□□□ -1.33
CSDE1-205ENST00000438362 CNTD1Q8N815 330 aa6.76□□□□□ -1.33
CSDE1-205ENST00000438362 ZNF483Q8TF39 744 aaPredicted RBP6.76□□□□□ -1.33
CSDE1-205ENST00000438362 FBXO32Q969P5 355 aa6.76□□□□□ -1.33
CSDE1-205ENST00000438362 PTCD3Q96EY7 689 aaKnown RBP6.76□□□□□ -1.33
CSDE1-205ENST00000438362 HIST1H2AHQ96KK5 128 aa6.76□□□□□ -1.33
CSDE1-205ENST00000438362 RNF145Q96MT1 663 aa6.76□□□□□ -1.33
CSDE1-205ENST00000438362 SERPINB11Q96P15 392 aa6.76□□□□□ -1.33
CSDE1-205ENST00000438362 TUBGCP5Q96RT8 1024 aa6.76□□□□□ -1.33
CSDE1-205ENST00000438362 HIST1H2AJQ99878 128 aa6.76□□□□□ -1.33
CSDE1-205ENST00000438362 H2AFJQ9BTM1 129 aa6.76□□□□□ -1.33
CSDE1-205ENST00000438362 C1orf21Q9H246 121 aa6.76□□□□□ -1.33
CSDE1-205ENST00000438362 CYLDQ9NQC7 956 aa6.76□□□□□ -1.33
CSDE1-205ENST00000438362 ATXN10Q9UBB4 475 aa6.76□□□□□ -1.33
CSDE1-205ENST00000438362 DMTF1Q9Y222 760 aa6.76□□□□□ -1.33
CSDE1-205ENST00000438362 NR2E3Q9Y5X4 410 aa6.76□□□□□ -1.33
CSDE1-205ENST00000438362 ANKRD36CQ5JPF3 1778 aa6.76□□□□□ -1.33
CSDE1-205ENST00000438362 NRCAMQ92823 1304 aa6.76□□□□□ -1.33
CSDE1-205ENST00000438362 TK2O00142 265 aa6.76□□□□□ -1.33
CSDE1-205ENST00000438362 TMED10P49755 219 aaKnown RBP6.76□□□□□ -1.33
CSDE1-205ENST00000438362 SLC7A2P52569 658 aa6.76□□□□□ -1.33
CSDE1-205ENST00000438362 NFE2Q16621 373 aaPredicted RBP6.76□□□□□ -1.33
CSDE1-205ENST00000438362 AARS2Q5JTZ9 985 aaKnown RBP6.76□□□□□ -1.33
CSDE1-205ENST00000438362 IQSEC1Q6DN90 963 aa6.76□□□□□ -1.33
CSDE1-205ENST00000438362 PKN3Q6P5Z2 889 aa6.76□□□□□ -1.33
CSDE1-205ENST00000438362 ZYG11AQ6WRX3 759 aa6.76□□□□□ -1.33
CSDE1-205ENST00000438362 TREML1Q86YW5 311 aa6.76□□□□□ -1.33
CSDE1-205ENST00000438362 UNC5BQ8IZJ1 945 aa6.76□□□□□ -1.33
CSDE1-205ENST00000438362 FAM81AQ8TBF8 368 aa6.76□□□□□ -1.33
CSDE1-205ENST00000438362 LENG1Q96BZ8 264 aaPredicted RBP6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms