RNA–Protein interactions for RNA: ENST00000436336.6

CPSF4-204, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CPSF4, Length 1,738 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-204ENST00000436336 TTC17Q96AE7 1141 aa23.39■■□□□ 1.33
CPSF4-204ENST00000436336 FMO2Q99518 471 aa23.39■■□□□ 1.33
CPSF4-204ENST00000436336 GORASP1Q9BQQ3 440 aa23.39■■□□□ 1.33
CPSF4-204ENST00000436336 SLC25A51Q9H1U9 297 aa23.39■■□□□ 1.33
CPSF4-204ENST00000436336 EIF2B3Q9NR50 452 aaKnown RBP23.39■■□□□ 1.33
CPSF4-204ENST00000436336 ARGLU1Q9NWB6 273 aaPredicted RBP23.39■■□□□ 1.33
CPSF4-204ENST00000436336 LIMD1Q9UGP4 676 aa23.39■■□□□ 1.33
CPSF4-204ENST00000436336 SLC25A13Q9UJS0 675 aa23.39■■□□□ 1.33
CPSF4-204ENST00000436336 MYO10Q9HD67 2058 aa23.38■■□□□ 1.33
CPSF4-204ENST00000436336 GOLGA6CA6NDK9 693 aa23.38■■□□□ 1.33
CPSF4-204ENST00000436336 GOLGA6BA6NDN3 693 aa23.38■■□□□ 1.33
CPSF4-204ENST00000436336 F5H423 210 aaPredicted RBP23.38■■□□□ 1.33
CPSF4-204ENST00000436336 DYNC1I1O14576 645 aa23.38■■□□□ 1.33
CPSF4-204ENST00000436336 TMCC1O94876 653 aa23.38■■□□□ 1.33
CPSF4-204ENST00000436336 GOLGA6DP0CG33 693 aa23.38■■□□□ 1.33
CPSF4-204ENST00000436336 ITKQ08881 620 aa23.38■■□□□ 1.33
CPSF4-204ENST00000436336 ALG1LQ6GMV1 187 aa23.38■■□□□ 1.33
CPSF4-204ENST00000436336 KLHDC8BQ8IXV7 354 aa23.38■■□□□ 1.33
CPSF4-204ENST00000436336 TTC8Q8TAM2 541 aa23.38■■□□□ 1.33
CPSF4-204ENST00000436336 MGME1Q9BQP7 344 aa23.38■■□□□ 1.33
CPSF4-204ENST00000436336 GOLGA6AQ9NYA3 693 aa23.38■■□□□ 1.33
CPSF4-204ENST00000436336 AAR2Q9Y312 384 aaKnown RBP23.38■■□□□ 1.33
CPSF4-204ENST00000436336 TCRBV7S3A2A0A539 114 aa23.37■■□□□ 1.33
CPSF4-204ENST00000436336 ERI2A8K979 691 aaKnown RBP23.37■■□□□ 1.33
CPSF4-204ENST00000436336 PALM2-AKAP2B1ALY0 433 aaPredicted RBP23.37■■□□□ 1.33
CPSF4-204ENST00000436336 ANXA9O76027 345 aa23.37■■□□□ 1.33
CPSF4-204ENST00000436336 TMEM63AO94886 807 aa23.37■■□□□ 1.33
CPSF4-204ENST00000436336 H2AFXP16104 143 aaPredicted RBP23.37■■□□□ 1.33
CPSF4-204ENST00000436336 OPRD1P41143 372 aa23.37■■□□□ 1.33
CPSF4-204ENST00000436336 LMAN1P49257 510 aa23.37■■□□□ 1.33
CPSF4-204ENST00000436336 MAXP61244 160 aa23.37■■□□□ 1.33
CPSF4-204ENST00000436336 CDK16Q00536 496 aa23.37■■□□□ 1.33
CPSF4-204ENST00000436336 TMEM215Q68D42 235 aa23.37■■□□□ 1.33
CPSF4-204ENST00000436336 TSEN2Q8NCE0 465 aaKnown RBP23.37■■□□□ 1.33
CPSF4-204ENST00000436336 FOXP3Q9BZS1 431 aa23.37■■□□□ 1.33
CPSF4-204ENST00000436336 TRPV5Q9NQA5 729 aa23.37■■□□□ 1.33
CPSF4-204ENST00000436336 HS3ST2Q9Y278 367 aa23.37■■□□□ 1.33
CPSF4-204ENST00000436336 MUSKO15146 869 aa23.36■■□□□ 1.33
CPSF4-204ENST00000436336 PSMD3O43242 534 aa23.36■■□□□ 1.33
CPSF4-204ENST00000436336 MT-CO1P00395 513 aa23.36■■□□□ 1.33
CPSF4-204ENST00000436336 CTSOP43234 321 aaPredicted RBP23.36■■□□□ 1.33
CPSF4-204ENST00000436336 ECT2LQ008S8 904 aa23.36■■□□□ 1.33
CPSF4-204ENST00000436336 PREPLQ4J6C6 727 aaPredicted RBP23.36■■□□□ 1.33
CPSF4-204ENST00000436336 SLC44A3Q8N4M1 653 aa23.36■■□□□ 1.33
CPSF4-204ENST00000436336 PDCD7Q8N8D1 485 aaKnown RBP23.36■■□□□ 1.33
CPSF4-204ENST00000436336 MAFAQ8NHW3 353 aaPredicted RBP23.36■■□□□ 1.33
CPSF4-204ENST00000436336 AENQ8WTP8 325 aaKnown RBP23.36■■□□□ 1.33
CPSF4-204ENST00000436336 HNRNPLLQ8WVV9 542 aaKnown RBP23.36■■□□□ 1.33
CPSF4-204ENST00000436336 IMP4Q96G21 291 aaKnown RBP23.36■■□□□ 1.33
CPSF4-204ENST00000436336 ASLP04424 464 aa23.36■■□□□ 1.33
CPSF4-204ENST00000436336 GEMP55040 296 aa23.36■■□□□ 1.33
CPSF4-204ENST00000436336 SYCP2LQ5T4T6 812 aa23.36■■□□□ 1.33
CPSF4-204ENST00000436336 EMBQ6PCB8 327 aa23.36■■□□□ 1.33
CPSF4-204ENST00000436336 PPP1R21Q6ZMI0 780 aa23.36■■□□□ 1.33
CPSF4-204ENST00000436336 PHTF2Q8N3S3 785 aa23.36■■□□□ 1.33
CPSF4-204ENST00000436336 ZCCHC9Q8N567 271 aaKnown RBP23.36■■□□□ 1.33
CPSF4-204ENST00000436336 ATP11CQ8NB49 1132 aa23.36■■□□□ 1.33
CPSF4-204ENST00000436336 MCUQ8NE86 351 aa23.36■■□□□ 1.33
CPSF4-204ENST00000436336 OXNAD1Q96HP4 312 aaPredicted RBP23.36■■□□□ 1.33
CPSF4-204ENST00000436336 MLPHQ9BV36 600 aaPredicted RBP23.36■■□□□ 1.33
CPSF4-204ENST00000436336 FRMD8Q9BZ67 464 aaPredicted RBP23.36■■□□□ 1.33
CPSF4-204ENST00000436336 TSPYL1Q9H0U9 437 aa23.36■■□□□ 1.33
CPSF4-204ENST00000436336 FCF1Q9Y324 198 aaKnown RBP23.36■■□□□ 1.33
CPSF4-204ENST00000436336 AP2A1O95782 977 aa23.35■■□□□ 1.33
CPSF4-204ENST00000436336 SRCP12931 536 aa23.35■■□□□ 1.33
CPSF4-204ENST00000436336 IL9P15248 144 aa23.35■■□□□ 1.33
CPSF4-204ENST00000436336 CES1P23141 567 aa23.35■■□□□ 1.33
CPSF4-204ENST00000436336 RHOAP61586 193 aa23.35■■□□□ 1.33
CPSF4-204ENST00000436336 SARNPP82979 210 aaKnown RBP23.35■■□□□ 1.33
CPSF4-204ENST00000436336 NSUN2Q08J23 767 aaKnown RBP eCLIP23.35■■□□□ 1.33
CPSF4-204ENST00000436336 KCTD11Q693B1 232 aa23.35■■□□□ 1.33
CPSF4-204ENST00000436336 SH2D3CQ8N5H7 860 aa23.35■■□□□ 1.33
CPSF4-204ENST00000436336 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP23.35■■□□□ 1.33
CPSF4-204ENST00000436336 TERB1Q8NA31 727 aa23.35■■□□□ 1.33
CPSF4-204ENST00000436336 SPATA22Q8NHS9 363 aa23.35■■□□□ 1.33
CPSF4-204ENST00000436336 ARRDC2Q8TBH0 407 aa23.35■■□□□ 1.33
CPSF4-204ENST00000436336 CHFRQ96EP1 664 aa23.35■■□□□ 1.33
CPSF4-204ENST00000436336 RPL10LQ96L21 214 aaKnown RBP23.35■■□□□ 1.33
CPSF4-204ENST00000436336 SEMA3CQ99985 751 aa23.35■■□□□ 1.33
CPSF4-204ENST00000436336 VPS45Q9NRW7 570 aa23.35■■□□□ 1.33
CPSF4-204ENST00000436336 LHX3Q9UBR4 397 aa23.35■■□□□ 1.33
CPSF4-204ENST00000436336 K7ERQ8 282 aa23.34■■□□□ 1.33
CPSF4-204ENST00000436336 ATP5BP06576 529 aaKnown RBP23.34■■□□□ 1.33
CPSF4-204ENST00000436336 FAM153BP0C7A2 387 aa23.34■■□□□ 1.33
CPSF4-204ENST00000436336 CR2P20023 1033 aa23.34■■□□□ 1.33
CPSF4-204ENST00000436336 DSC2Q02487 901 aa23.34■■□□□ 1.33
CPSF4-204ENST00000436336 TFF2Q03403 129 aa23.34■■□□□ 1.33
CPSF4-204ENST00000436336 KDSRQ06136 332 aa23.34■■□□□ 1.33
CPSF4-204ENST00000436336 NIPAL4Q0D2K0 466 aa23.34■■□□□ 1.33
CPSF4-204ENST00000436336 MPP3Q13368 585 aa23.34■■□□□ 1.33
CPSF4-204ENST00000436336 EIF4HQ15056 248 aaKnown RBP23.34■■□□□ 1.33
CPSF4-204ENST00000436336 FAM153CQ494X1 144 aa23.34■■□□□ 1.33
CPSF4-204ENST00000436336 FBXO38Q6PIJ6 1188 aa23.34■■□□□ 1.33
CPSF4-204ENST00000436336 ANKRD7Q92527 254 aa23.34■■□□□ 1.33
CPSF4-204ENST00000436336 DNASE1L2Q92874 299 aa23.34■■□□□ 1.33
CPSF4-204ENST00000436336 RBM15Q96T37 977 aaKnown RBP eCLIP23.34■■□□□ 1.33
CPSF4-204ENST00000436336 CIPCQ9C0C6 399 aa23.34■■□□□ 1.33
CPSF4-204ENST00000436336 FAM153AQ9UHL3 310 aa23.34■■□□□ 1.33
CPSF4-204ENST00000436336 ERVW-1Q9UQF0 538 aa23.34■■□□□ 1.33
CPSF4-204ENST00000436336 MUC22E2RYF6 1773 aaPredicted RBP23.34■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms