RNA–Protein interactions for RNA: ENST00000435145.6

HLA-DQB2-231, Transcript of major histocompatibility complex, class II, DQ beta 2, humanhuman

BASIC

Gene HLA-DQB2, Length 2,026 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2-231ENST00000435145 RNF34Q969K3 372 aa16.31■□□□□ 0.2
HLA-DQB2-231ENST00000435145 SMOC2Q9H3U7 446 aa16.31■□□□□ 0.2
HLA-DQB2-231ENST00000435145 AGO3Q9H9G7 860 aaKnown RBP16.31■□□□□ 0.2
HLA-DQB2-231ENST00000435145 DLGAP2Q9P1A6 1054 aa16.31■□□□□ 0.2
HLA-DQB2-231ENST00000435145 CAMSAP3Q9P1Y5 1249 aaPredicted RBP16.31■□□□□ 0.2
HLA-DQB2-231ENST00000435145 DSEQ9UL01 958 aa16.31■□□□□ 0.2
HLA-DQB2-231ENST00000435145 TCAF1Q9Y4C2 921 aa16.31■□□□□ 0.2
HLA-DQB2-231ENST00000435145 ASB3Q9Y575 518 aa16.31■□□□□ 0.2
HLA-DQB2-231ENST00000435145 DFFAO00273 331 aa16.3■□□□□ 0.2
HLA-DQB2-231ENST00000435145 DUSP11O75319 330 aaKnown RBP16.3■□□□□ 0.2
HLA-DQB2-231ENST00000435145 PAGE1O75459 146 aa16.3■□□□□ 0.2
HLA-DQB2-231ENST00000435145 SORBS2O94875 1100 aaKnown RBP16.3■□□□□ 0.2
HLA-DQB2-231ENST00000435145 BAG2O95816 211 aa16.3■□□□□ 0.2
HLA-DQB2-231ENST00000435145 MT-CYBP00156 380 aaPredicted RBP16.3■□□□□ 0.2
HLA-DQB2-231ENST00000435145 PGK1P00558 417 aa16.3■□□□□ 0.2
HLA-DQB2-231ENST00000435145 AKR1A1P14550 325 aa16.3■□□□□ 0.2
HLA-DQB2-231ENST00000435145 PAX3P23760 479 aa16.3■□□□□ 0.2
HLA-DQB2-231ENST00000435145 ADSLP30566 484 aaPredicted RBP16.3■□□□□ 0.2
HLA-DQB2-231ENST00000435145 GEMP55040 296 aa16.3■□□□□ 0.2
HLA-DQB2-231ENST00000435145 ARL13AQ5H913 290 aaPredicted RBP16.3■□□□□ 0.2
HLA-DQB2-231ENST00000435145 ARMC3Q5W041 872 aa16.3■□□□□ 0.2
HLA-DQB2-231ENST00000435145 SCAMP5Q8TAC9 235 aa16.3■□□□□ 0.2
HLA-DQB2-231ENST00000435145 LENG8Q96PV6 779 aaPredicted RBP16.3■□□□□ 0.2
HLA-DQB2-231ENST00000435145 SLC39A8Q9C0K1 460 aa16.3■□□□□ 0.2
HLA-DQB2-231ENST00000435145 TREX1Q9NSU2 369 aa16.3■□□□□ 0.2
HLA-DQB2-231ENST00000435145 VTI1BQ9UEU0 232 aa16.3■□□□□ 0.2
HLA-DQB2-231ENST00000435145 SCOCQ9UIL1 159 aa16.3■□□□□ 0.2
HLA-DQB2-231ENST00000435145 SSX2IPQ9Y2D8 614 aa16.3■□□□□ 0.2
HLA-DQB2-231ENST00000435145 PTPRDP23468 1912 aa16.3■□□□□ 0.2
HLA-DQB2-231ENST00000435145 SLCO1B7G3V0H7 640 aa16.29■□□□□ 0.2
HLA-DQB2-231ENST00000435145 GPR182O15218 404 aa16.29■□□□□ 0.2
HLA-DQB2-231ENST00000435145 PIGNO95427 931 aa16.29■□□□□ 0.2
HLA-DQB2-231ENST00000435145 TFEBP19484 476 aa16.29■□□□□ 0.2
HLA-DQB2-231ENST00000435145 PIK3R1P27986 724 aa16.29■□□□□ 0.2
HLA-DQB2-231ENST00000435145 BRCC3P46736 316 aa16.29■□□□□ 0.2
HLA-DQB2-231ENST00000435145 RAB10P61026 200 aa16.29■□□□□ 0.2
HLA-DQB2-231ENST00000435145 NRG1Q02297 640 aaPredicted RBP16.29■□□□□ 0.2
HLA-DQB2-231ENST00000435145 GRIK3Q13003 919 aa16.29■□□□□ 0.2
HLA-DQB2-231ENST00000435145 PEX6Q13608 980 aa16.29■□□□□ 0.2
HLA-DQB2-231ENST00000435145 SEL1L3Q68CR1 1132 aa16.29■□□□□ 0.2
HLA-DQB2-231ENST00000435145 LRRC8EQ6NSJ5 796 aa16.29■□□□□ 0.2
HLA-DQB2-231ENST00000435145 ESRP1Q6NXG1 681 aaKnown RBP16.29■□□□□ 0.2
HLA-DQB2-231ENST00000435145 SLC41A1Q8IVJ1 513 aa16.29■□□□□ 0.2
HLA-DQB2-231ENST00000435145 FSTL5Q8N475 847 aaPredicted RBP16.29■□□□□ 0.2
HLA-DQB2-231ENST00000435145 PYDC1Q8WXC3 89 aa16.29■□□□□ 0.2
HLA-DQB2-231ENST00000435145 TSNARE1Q96NA8 513 aa16.29■□□□□ 0.2
HLA-DQB2-231ENST00000435145 TMEM209Q96SK2 561 aa16.29■□□□□ 0.2
HLA-DQB2-231ENST00000435145 CCDC28BQ9BUN5 200 aa16.29■□□□□ 0.2
HLA-DQB2-231ENST00000435145 FICDQ9BVA6 458 aa16.29■□□□□ 0.2
HLA-DQB2-231ENST00000435145 SIK2Q9H0K1 926 aa16.29■□□□□ 0.2
HLA-DQB2-231ENST00000435145 CATSPERBQ9H7T0 1116 aa16.29■□□□□ 0.2
HLA-DQB2-231ENST00000435145 CYP4F11Q9HBI6 524 aa16.29■□□□□ 0.2
HLA-DQB2-231ENST00000435145 ENTPD7Q9NQZ7 604 aa16.29■□□□□ 0.2
HLA-DQB2-231ENST00000435145 RUVBL2Q9Y230 463 aaKnown RBP16.29■□□□□ 0.2
HLA-DQB2-231ENST00000435145 ACOT9Q9Y305 439 aa16.29■□□□□ 0.2
HLA-DQB2-231ENST00000435145 CCDC78A2IDD5 438 aa16.29■□□□□ 0.2
HLA-DQB2-231ENST00000435145 TNFRSF10BO14763 440 aa16.29■□□□□ 0.2
HLA-DQB2-231ENST00000435145 DLX3O60479 287 aa16.29■□□□□ 0.2
HLA-DQB2-231ENST00000435145 ZMPSTE24O75844 475 aa16.29■□□□□ 0.2
HLA-DQB2-231ENST00000435145 NEBLO76041 1014 aa16.29■□□□□ 0.2
HLA-DQB2-231ENST00000435145 B3GAT3O94766 335 aa16.29■□□□□ 0.2
HLA-DQB2-231ENST00000435145 UPP2O95045 317 aa16.29■□□□□ 0.2
HLA-DQB2-231ENST00000435145 CTSHP09668 335 aa16.29■□□□□ 0.2
HLA-DQB2-231ENST00000435145 THRAP10827 490 aa16.29■□□□□ 0.2
HLA-DQB2-231ENST00000435145 NAGLUP54802 743 aa16.29■□□□□ 0.2
HLA-DQB2-231ENST00000435145 MPP1Q00013 466 aa16.29■□□□□ 0.2
HLA-DQB2-231ENST00000435145 DSC3Q14574 896 aa16.29■□□□□ 0.2
HLA-DQB2-231ENST00000435145 PPP2R5DQ14738 602 aa16.29■□□□□ 0.2
HLA-DQB2-231ENST00000435145 POU6F1Q14863 301 aa16.29■□□□□ 0.2
HLA-DQB2-231ENST00000435145 MAPRE1Q15691 268 aaKnown RBP16.29■□□□□ 0.2
HLA-DQB2-231ENST00000435145 LSM12Q3MHD2 195 aaKnown RBP16.29■□□□□ 0.2
HLA-DQB2-231ENST00000435145 TSTD2Q5T7W7 516 aa16.29■□□□□ 0.2
HLA-DQB2-231ENST00000435145 KIAA0930Q6ICG6 404 aaPredicted RBP16.29■□□□□ 0.2
HLA-DQB2-231ENST00000435145 RANBP10Q6VN20 620 aa16.29■□□□□ 0.2
HLA-DQB2-231ENST00000435145 TMC7Q7Z402 723 aa16.29■□□□□ 0.2
HLA-DQB2-231ENST00000435145 HPS6Q86YV9 775 aa16.29■□□□□ 0.2
HLA-DQB2-231ENST00000435145 CEP97Q8IW35 865 aa16.29■□□□□ 0.2
HLA-DQB2-231ENST00000435145 DENND6AQ8IWF6 608 aa16.29■□□□□ 0.2
HLA-DQB2-231ENST00000435145 C2CD4AQ8NCU7 369 aaPredicted RBP16.29■□□□□ 0.2
HLA-DQB2-231ENST00000435145 TRPV1Q8NER1 839 aa16.29■□□□□ 0.2
HLA-DQB2-231ENST00000435145 PPHLN1Q8NEY8 458 aaKnown RBP16.29■□□□□ 0.2
HLA-DQB2-231ENST00000435145 IPMKQ8NFU5 416 aa16.29■□□□□ 0.2
HLA-DQB2-231ENST00000435145 PDCD6IPQ8WUM4 868 aaKnown RBP16.29■□□□□ 0.2
HLA-DQB2-231ENST00000435145 WDR55Q9H6Y2 383 aaPredicted RBP16.29■□□□□ 0.2
HLA-DQB2-231ENST00000435145 ABCC13Q9NSE7 274 aa16.29■□□□□ 0.2
HLA-DQB2-231ENST00000435145 PRPF19Q9UMS4 504 aaKnown RBP16.29■□□□□ 0.2
HLA-DQB2-231ENST00000435145 NLRC5Q86WI3 1866 aa16.29■□□□□ 0.2
HLA-DQB2-231ENST00000435145 FAM95CA0A1B0GW59 222 aa16.28■□□□□ 0.2
HLA-DQB2-231ENST00000435145 RGSL1A5PLK6 1076 aa16.28■□□□□ 0.2
HLA-DQB2-231ENST00000435145 H3BNX3 289 aa16.28■□□□□ 0.2
HLA-DQB2-231ENST00000435145 MGEA5O60502 916 aa16.28■□□□□ 0.2
HLA-DQB2-231ENST00000435145 VAPBO95292 243 aa16.28■□□□□ 0.2
HLA-DQB2-231ENST00000435145 CELF2O95319 508 aaKnown RBP16.28■□□□□ 0.2
HLA-DQB2-231ENST00000435145 HLA-DQB2P05538 268 aa16.28■□□□□ 0.2
HLA-DQB2-231ENST00000435145 CCR1P32246 355 aa16.28■□□□□ 0.2
HLA-DQB2-231ENST00000435145 CCR10P46092 362 aa16.28■□□□□ 0.2
HLA-DQB2-231ENST00000435145 RAB27AP51159 221 aa16.28■□□□□ 0.2
HLA-DQB2-231ENST00000435145 PGGT1BP53609 377 aa16.28■□□□□ 0.2
HLA-DQB2-231ENST00000435145 XIAPP98170 497 aa16.28■□□□□ 0.2
HLA-DQB2-231ENST00000435145 DLG1Q12959 904 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms