RNA–Protein interactions for RNA: ENST00000435070.6

CPSF6-202, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF6, Length 6,616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-202ENST00000435070 MAMDC4Q6UXC1 1216 aa7.56□□□□□ -1.2
CPSF6-202ENST00000435070 SLCO6A1Q86UG4 719 aa7.56□□□□□ -1.2
CPSF6-202ENST00000435070 DHFR2Q86XF0 187 aa7.56□□□□□ -1.2
CPSF6-202ENST00000435070 REM2Q8IYK8 340 aaPredicted RBP7.56□□□□□ -1.2
CPSF6-202ENST00000435070 WDTC1Q8N5D0 677 aa7.56□□□□□ -1.2
CPSF6-202ENST00000435070 LILRB4Q8NHJ6 448 aa7.56□□□□□ -1.2
CPSF6-202ENST00000435070 TRIM39Q9HCM9 518 aa7.56□□□□□ -1.2
CPSF6-202ENST00000435070 GTSE1Q9NYZ3 720 aa7.56□□□□□ -1.2
CPSF6-202ENST00000435070 SNX9Q9Y5X1 595 aa7.56□□□□□ -1.2
CPSF6-202ENST00000435070 SLC30A1Q9Y6M5 507 aa7.56□□□□□ -1.2
CPSF6-202ENST00000435070 A0A096LPK6 155 aa7.56□□□□□ -1.2
CPSF6-202ENST00000435070 SNAP29O95721 258 aa7.56□□□□□ -1.2
CPSF6-202ENST00000435070 ITGB5P18084 799 aa7.56□□□□□ -1.2
CPSF6-202ENST00000435070 SLC7A1P30825 629 aa7.56□□□□□ -1.2
CPSF6-202ENST00000435070 AVPR1AP37288 418 aa7.56□□□□□ -1.2
CPSF6-202ENST00000435070 GRIA4P48058 902 aa7.56□□□□□ -1.2
CPSF6-202ENST00000435070 FRA10AC1Q70Z53 315 aa7.56□□□□□ -1.2
CPSF6-202ENST00000435070 ITIH5Q86UX2 942 aa7.56□□□□□ -1.2
CPSF6-202ENST00000435070 CAMK1DQ8IU85 385 aa7.56□□□□□ -1.2
CPSF6-202ENST00000435070 OMDQ99983 421 aa7.56□□□□□ -1.2
CPSF6-202ENST00000435070 LHPPQ9H008 270 aa7.56□□□□□ -1.2
CPSF6-202ENST00000435070 HMG20AQ9NP66 347 aa7.56□□□□□ -1.2
CPSF6-202ENST00000435070 DIABLOQ9NR28 239 aa7.56□□□□□ -1.2
CPSF6-202ENST00000435070 MKS1Q9NXB0 559 aa7.56□□□□□ -1.2
CPSF6-202ENST00000435070 NUDT5Q9UKK9 219 aa7.56□□□□□ -1.2
CPSF6-202ENST00000435070 CNOT11Q9UKZ1 510 aaKnown RBP7.56□□□□□ -1.2
CPSF6-202ENST00000435070 TCAF1Q9Y4C2 921 aa7.56□□□□□ -1.2
CPSF6-202ENST00000435070 PCDHGA8Q9Y5G5 932 aa7.56□□□□□ -1.2
CPSF6-202ENST00000435070 STK25O00506 426 aa7.55□□□□□ -1.2
CPSF6-202ENST00000435070 USP12O75317 370 aa7.55□□□□□ -1.2
CPSF6-202ENST00000435070 GNL1P36915 607 aaPredicted RBP7.55□□□□□ -1.2
CPSF6-202ENST00000435070 KCNC4Q03721 635 aa7.55□□□□□ -1.2
CPSF6-202ENST00000435070 GALNT2Q10471 571 aa7.55□□□□□ -1.2
CPSF6-202ENST00000435070 ZNF846Q147U1 533 aa7.55□□□□□ -1.2
CPSF6-202ENST00000435070 SLC9A5Q14940 896 aa7.55□□□□□ -1.2
CPSF6-202ENST00000435070 RSBN1Q5VWQ0 802 aaPredicted RBP7.55□□□□□ -1.2
CPSF6-202ENST00000435070 SKA2Q8WVK7 121 aaPredicted RBP7.55□□□□□ -1.2
CPSF6-202ENST00000435070 ZNF347Q96SE7 839 aa7.55□□□□□ -1.2
CPSF6-202ENST00000435070 PIF1Q9H611 641 aa7.55□□□□□ -1.2
CPSF6-202ENST00000435070 KCNH7Q9NS40 1196 aa7.55□□□□□ -1.2
CPSF6-202ENST00000435070 PCDHAC2Q9Y5I4 1007 aa7.55□□□□□ -1.2
CPSF6-202ENST00000435070 CSADQ9Y600 493 aa7.55□□□□□ -1.2
CPSF6-202ENST00000435070 ZNF541Q9H0D2 1346 aa7.55□□□□□ -1.2
CPSF6-202ENST00000435070 ATP6AP2A0A1C7CYW4 349 aa7.55□□□□□ -1.2
CPSF6-202ENST00000435070 CCDC162PA2VCL2 907 aa7.55□□□□□ -1.2
CPSF6-202ENST00000435070 PTGES3LE9PB15 166 aa7.55□□□□□ -1.2
CPSF6-202ENST00000435070 ZNF701M0R085 212 aaPredicted RBP7.55□□□□□ -1.2
CPSF6-202ENST00000435070 ARHGEF9O43307 516 aa7.55□□□□□ -1.2
CPSF6-202ENST00000435070 CLASP2O75122 1294 aaKnown RBP7.55□□□□□ -1.2
CPSF6-202ENST00000435070 ATP6AP2O75787 350 aa7.55□□□□□ -1.2
CPSF6-202ENST00000435070 RPL14P50914 215 aaKnown RBP7.55□□□□□ -1.2
CPSF6-202ENST00000435070 SPP2Q13103 211 aa7.55□□□□□ -1.2
CPSF6-202ENST00000435070 NDUFA5Q16718 116 aa7.55□□□□□ -1.2
CPSF6-202ENST00000435070 AKAP14Q86UN6 197 aa7.55□□□□□ -1.2
CPSF6-202ENST00000435070 PEBP4Q96S96 227 aa7.55□□□□□ -1.2
CPSF6-202ENST00000435070 TASP1Q9H6P5 420 aa7.55□□□□□ -1.2
CPSF6-202ENST00000435070 TCP10L2B9ZVM9 353 aa7.55□□□□□ -1.2
CPSF6-202ENST00000435070 DLGAP1O14490 977 aa7.55□□□□□ -1.2
CPSF6-202ENST00000435070 SNPHO15079 494 aa7.55□□□□□ -1.2
CPSF6-202ENST00000435070 PMM2O15305 246 aa7.55□□□□□ -1.2
CPSF6-202ENST00000435070 ATP6V1B2P21281 511 aa7.55□□□□□ -1.2
CPSF6-202ENST00000435070 TTKP33981 857 aa7.55□□□□□ -1.2
CPSF6-202ENST00000435070 PHC1P78364 1004 aa7.55□□□□□ -1.2
CPSF6-202ENST00000435070 EPHX4Q8IUS5 362 aa7.55□□□□□ -1.2
CPSF6-202ENST00000435070 LGI2Q8N0V4 545 aa7.55□□□□□ -1.2
CPSF6-202ENST00000435070 SHCBP1Q8NEM2 672 aa7.55□□□□□ -1.2
CPSF6-202ENST00000435070 IL31RAQ8NI17 732 aa7.55□□□□□ -1.2
CPSF6-202ENST00000435070 MAGEB5Q9BZ81 275 aa7.55□□□□□ -1.2
CPSF6-202ENST00000435070 HACD3Q9P035 362 aa7.55□□□□□ -1.2
CPSF6-202ENST00000435070 PCDHGA7Q9Y5G6 932 aa7.55□□□□□ -1.2
CPSF6-202ENST00000435070 PCDHA11Q9Y5I1 949 aa7.55□□□□□ -1.2
CPSF6-202ENST00000435070 PAPSS1O43252 624 aaPredicted RBP7.55□□□□□ -1.2
CPSF6-202ENST00000435070 GPC4O75487 556 aa7.55□□□□□ -1.2
CPSF6-202ENST00000435070 RSL1D1O76021 490 aaKnown RBP7.55□□□□□ -1.2
CPSF6-202ENST00000435070 RACK1P63244 317 aaKnown RBP7.55□□□□□ -1.2
CPSF6-202ENST00000435070 VPS72Q15906 364 aa7.55□□□□□ -1.2
CPSF6-202ENST00000435070 WDR45BQ5MNZ6 344 aa7.55□□□□□ -1.2
CPSF6-202ENST00000435070 RPS27LQ71UM5 84 aaKnown RBP7.55□□□□□ -1.2
CPSF6-202ENST00000435070 ANKRD13BQ86YJ7 626 aa7.55□□□□□ -1.2
CPSF6-202ENST00000435070 MAP4K3Q8IVH8 894 aa7.55□□□□□ -1.2
CPSF6-202ENST00000435070 SUN5Q8TC36 379 aa7.55□□□□□ -1.2
CPSF6-202ENST00000435070 ZNF486Q96H40 463 aaPredicted RBP7.55□□□□□ -1.2
CPSF6-202ENST00000435070 CEP170P1Q96L14 293 aa7.55□□□□□ -1.2
CPSF6-202ENST00000435070 C17orf80Q9BSJ5 609 aa7.55□□□□□ -1.2
CPSF6-202ENST00000435070 CDCA7Q9BWT1 371 aaPredicted RBP7.55□□□□□ -1.2
CPSF6-202ENST00000435070 RSAD1Q9HA92 442 aa7.55□□□□□ -1.2
CPSF6-202ENST00000435070 ZBTB26Q9HCK0 441 aa7.55□□□□□ -1.2
CPSF6-202ENST00000435070 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP7.55□□□□□ -1.2
CPSF6-202ENST00000435070 ANKMY1Q9P2S6 941 aa7.55□□□□□ -1.2
CPSF6-202ENST00000435070 MTRRQ9UBK8 725 aa7.55□□□□□ -1.2
CPSF6-202ENST00000435070 ZSCAN5BA6NJL1 495 aa7.55□□□□□ -1.2
CPSF6-202ENST00000435070 HNRNPCL2B2RXH8 293 aa7.55□□□□□ -1.2
CPSF6-202ENST00000435070 MRPS15P82914 257 aaKnown RBP7.55□□□□□ -1.2
CPSF6-202ENST00000435070 AQP6Q13520 282 aa7.55□□□□□ -1.2
CPSF6-202ENST00000435070 CCDC58Q4VC31 144 aa7.55□□□□□ -1.2
CPSF6-202ENST00000435070 FAM102AQ5T9C2 384 aaPredicted RBP7.55□□□□□ -1.2
CPSF6-202ENST00000435070 C4orf22Q6V702 233 aa7.55□□□□□ -1.2
CPSF6-202ENST00000435070 GATAD2AQ86YP4 633 aa7.55□□□□□ -1.2
CPSF6-202ENST00000435070 ACVR1CQ8NER5 493 aa7.55□□□□□ -1.2
CPSF6-202ENST00000435070 SDCBP2Q9H190 292 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms