RNA–Protein interactions for RNA: ENST00000431540.7

CDH13-203, Transcript of cadherin 13, humanhuman

TSL 1 (best) BASIC

Gene CDH13, Length 831 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-203ENST00000431540 PTK2Q05397 1052 aa8.48□□□□□ -1.05
CDH13-203ENST00000431540 EIF3IQ13347 325 aaKnown RBP8.48□□□□□ -1.05
CDH13-203ENST00000431540 PNOCQ13519 176 aa8.48□□□□□ -1.05
CDH13-203ENST00000431540 AUHQ13825 339 aaKnown RBP8.48□□□□□ -1.05
CDH13-203ENST00000431540 PTK2BQ14289 1009 aa8.48□□□□□ -1.05
CDH13-203ENST00000431540 ZNF284Q2VY69 593 aa8.48□□□□□ -1.05
CDH13-203ENST00000431540 ACCSLQ4AC99 568 aa8.48□□□□□ -1.05
CDH13-203ENST00000431540 CCDC40Q4G0X9 1142 aa8.48□□□□□ -1.05
CDH13-203ENST00000431540 TMEM259Q4ZIN3 620 aa8.48□□□□□ -1.05
CDH13-203ENST00000431540 PRAMEF14Q5SWL7 426 aa8.48□□□□□ -1.05
CDH13-203ENST00000431540 PIP5KL1Q5T9C9 394 aa8.48□□□□□ -1.05
CDH13-203ENST00000431540 TTI2Q6NXR4 508 aa8.48□□□□□ -1.05
CDH13-203ENST00000431540 LVRNQ6Q4G3 990 aa8.48□□□□□ -1.05
CDH13-203ENST00000431540 LRRC31Q6UY01 552 aa8.48□□□□□ -1.05
CDH13-203ENST00000431540 MMS22LQ6ZRQ5 1243 aa8.48□□□□□ -1.05
CDH13-203ENST00000431540 C11orf57Q6ZUT1 292 aaPredicted RBP8.48□□□□□ -1.05
CDH13-203ENST00000431540 ERN2Q76MJ5 926 aaKnown RBP8.48□□□□□ -1.05
CDH13-203ENST00000431540 SLC26A9Q7LBE3 791 aa8.48□□□□□ -1.05
CDH13-203ENST00000431540 ZNF843Q8N446 348 aa8.48□□□□□ -1.05
CDH13-203ENST00000431540 DCAF4L2Q8NA75 395 aa8.48□□□□□ -1.05
CDH13-203ENST00000431540 DENND6BQ8NEG7 585 aa8.48□□□□□ -1.05
CDH13-203ENST00000431540 OR6C4Q8NGE1 309 aa8.48□□□□□ -1.05
CDH13-203ENST00000431540 OR2A12Q8NGT7 310 aa8.48□□□□□ -1.05
CDH13-203ENST00000431540 HCAR2Q8TDS4 363 aa8.48□□□□□ -1.05
CDH13-203ENST00000431540 CLEC4CQ8WTT0 213 aa8.48□□□□□ -1.05
CDH13-203ENST00000431540 PPP1R13BQ96KQ4 1090 aa8.48□□□□□ -1.05
CDH13-203ENST00000431540 SLC46A1Q96NT5 459 aa8.48□□□□□ -1.05
CDH13-203ENST00000431540 RPRD1AQ96P16 312 aaPredicted RBP8.48□□□□□ -1.05
CDH13-203ENST00000431540 HAPLN3Q96S86 360 aa8.48□□□□□ -1.05
CDH13-203ENST00000431540 ABCG4Q9H172 646 aa8.48□□□□□ -1.05
CDH13-203ENST00000431540 MTG2Q9H4K7 406 aa8.48□□□□□ -1.05
CDH13-203ENST00000431540 WDCPQ9H6R7 721 aa8.48□□□□□ -1.05
CDH13-203ENST00000431540 ARHGEF38Q9NXL2 777 aa8.48□□□□□ -1.05
CDH13-203ENST00000431540 VPS28Q9UK41 221 aa8.48□□□□□ -1.05
CDH13-203ENST00000431540 SARDHQ9UL12 918 aa8.48□□□□□ -1.05
CDH13-203ENST00000431540 STAP1Q9ULZ2 295 aa8.48□□□□□ -1.05
CDH13-203ENST00000431540 UTP18Q9Y5J1 556 aaKnown RBP eCLIP8.48□□□□□ -1.05
CDH13-203ENST00000431540 MYO18BQ8IUG5 2567 aa8.48□□□□□ -1.05
CDH13-203ENST00000431540 COL27A1Q8IZC6 1860 aaPredicted RBP8.47□□□□□ -1.05
CDH13-203ENST00000431540 EME2A4GXA9 379 aaPredicted RBP8.47□□□□□ -1.05
CDH13-203ENST00000431540 TMEM110-MUSTN1A8MSY1 372 aa8.47□□□□□ -1.05
CDH13-203ENST00000431540 E5RJQ4 531 aa8.47□□□□□ -1.05
CDH13-203ENST00000431540 J3QKU1 62 aa8.47□□□□□ -1.05
CDH13-203ENST00000431540 TRIM38O00635 465 aa8.47□□□□□ -1.05
CDH13-203ENST00000431540 RTN2O75298 545 aa8.47□□□□□ -1.05
CDH13-203ENST00000431540 C1QL1O75973 258 aa8.47□□□□□ -1.05
CDH13-203ENST00000431540 MOCS2O96007 188 aaPredicted RBP8.47□□□□□ -1.05
CDH13-203ENST00000431540 SRCP12931 536 aa8.47□□□□□ -1.05
CDH13-203ENST00000431540 PLA2G2AP14555 144 aa8.47□□□□□ -1.05
CDH13-203ENST00000431540 NME1P15531 152 aaKnown RBP8.47□□□□□ -1.05
CDH13-203ENST00000431540 PDGFRAP16234 1089 aa8.47□□□□□ -1.05
CDH13-203ENST00000431540 ITGB7P26010 798 aa8.47□□□□□ -1.05
CDH13-203ENST00000431540 GNA15P30679 374 aa8.47□□□□□ -1.05
CDH13-203ENST00000431540 L1CAMP32004 1257 aa8.47□□□□□ -1.05
CDH13-203ENST00000431540 RECQLP46063 649 aaPredicted RBP8.47□□□□□ -1.05
CDH13-203ENST00000431540 PMS1P54277 932 aaKnown RBP8.47□□□□□ -1.05
CDH13-203ENST00000431540 PPP2CBP62714 309 aa8.47□□□□□ -1.05
CDH13-203ENST00000431540 PPP2CAP67775 309 aa8.47□□□□□ -1.05
CDH13-203ENST00000431540 SLC6A3Q01959 620 aa8.47□□□□□ -1.05
CDH13-203ENST00000431540 VAC14Q08AM6 782 aa8.47□□□□□ -1.05
CDH13-203ENST00000431540 LRMPQ12912 555 aa8.47□□□□□ -1.05
CDH13-203ENST00000431540 PDCLQ13371 301 aa8.47□□□□□ -1.05
CDH13-203ENST00000431540 CCDC157Q569K6 752 aa8.47□□□□□ -1.05
CDH13-203ENST00000431540 MRPL14Q6P1L8 145 aaKnown RBP8.47□□□□□ -1.05
CDH13-203ENST00000431540 LAYNQ6UX15 382 aa8.47□□□□□ -1.05
CDH13-203ENST00000431540 KYAT3Q6YP21 454 aaKnown RBP8.47□□□□□ -1.05
CDH13-203ENST00000431540 SMYD4Q8IYR2 804 aaPredicted RBP8.47□□□□□ -1.05
CDH13-203ENST00000431540 DEFB106AQ8N104 65 aa8.47□□□□□ -1.05
CDH13-203ENST00000431540 ARL14Q8N4G2 192 aa8.47□□□□□ -1.05
CDH13-203ENST00000431540 PCDH20Q8N6Y1 951 aaKnown RBP8.47□□□□□ -1.05
CDH13-203ENST00000431540 NAT6Q93015 286 aa8.47□□□□□ -1.05
CDH13-203ENST00000431540 MYEOVQ96EZ4 313 aa8.47□□□□□ -1.05
CDH13-203ENST00000431540 APOLD1Q96LR9 279 aa8.47□□□□□ -1.05
CDH13-203ENST00000431540 KREMEN1Q96MU8 473 aa8.47□□□□□ -1.05
CDH13-203ENST00000431540 LGMNQ99538 433 aa8.47□□□□□ -1.05
CDH13-203ENST00000431540 C1QTNF2Q9BXJ5 285 aa8.47□□□□□ -1.05
CDH13-203ENST00000431540 SLC17A9Q9BYT1 436 aa8.47□□□□□ -1.05
CDH13-203ENST00000431540 GOLPH3LQ9H4A5 285 aa8.47□□□□□ -1.05
CDH13-203ENST00000431540 UBE2TQ9NPD8 197 aaPredicted RBP8.47□□□□□ -1.05
CDH13-203ENST00000431540 DDIT4Q9NX09 232 aa8.47□□□□□ -1.05
CDH13-203ENST00000431540 PPARGC1AQ9UBK2 798 aaKnown RBP8.47□□□□□ -1.05
CDH13-203ENST00000431540 ACSL6Q9UKU0 697 aa8.47□□□□□ -1.05
CDH13-203ENST00000431540 SCN8AQ9UQD0 1980 aa8.47□□□□□ -1.05
CDH13-203ENST00000431540 ARHGEF17Q96PE2 2063 aaPredicted RBP8.47□□□□□ -1.05
CDH13-203ENST00000431540 A0A1W2PQU0 124 aa8.46□□□□□ -1.06
CDH13-203ENST00000431540 B8ZZF3 427 aa8.46□□□□□ -1.06
CDH13-203ENST00000431540 K7ESM1 405 aa8.46□□□□□ -1.06
CDH13-203ENST00000431540 PAGE1O75459 146 aa8.46□□□□□ -1.06
CDH13-203ENST00000431540 LETM1O95202 739 aaPredicted RBP8.46□□□□□ -1.06
CDH13-203ENST00000431540 C6P13671 934 aa8.46□□□□□ -1.06
CDH13-203ENST00000431540 RBMS1P29558 406 aaKnown RBP8.46□□□□□ -1.06
CDH13-203ENST00000431540 CDH5P33151 784 aaPredicted RBP8.46□□□□□ -1.06
CDH13-203ENST00000431540 GABRB2P47870 512 aa8.46□□□□□ -1.06
CDH13-203ENST00000431540 STK19P49842 368 aaPredicted RBP8.46□□□□□ -1.06
CDH13-203ENST00000431540 PEX5P50542 639 aa8.46□□□□□ -1.06
CDH13-203ENST00000431540 BLKP51451 505 aa8.46□□□□□ -1.06
CDH13-203ENST00000431540 NEK3P51956 506 aa8.46□□□□□ -1.06
CDH13-203ENST00000431540 NRG1Q02297 640 aaPredicted RBP8.46□□□□□ -1.06
CDH13-203ENST00000431540 ISXQ2M1V0 245 aa8.46□□□□□ -1.06
CDH13-203ENST00000431540 RRAGAQ7L523 313 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms