RNA–Protein interactions for RNA: ENST00000429896.6

PTCH1-207, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 6,563 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-207ENST00000429896 UNGP13051 313 aaPredicted RBP13.1□□□□□ -0.31
PTCH1-207ENST00000429896 EPB42P16452 691 aa13.1□□□□□ -0.31
PTCH1-207ENST00000429896 RAP1GDS1P52306 607 aa13.1□□□□□ -0.31
PTCH1-207ENST00000429896 PFKPQ01813 784 aa13.1□□□□□ -0.31
PTCH1-207ENST00000429896 PKN3Q6P5Z2 889 aa13.1□□□□□ -0.31
PTCH1-207ENST00000429896 TMEM110Q86TL2 294 aa13.1□□□□□ -0.31
PTCH1-207ENST00000429896 MYO1HQ8N1T3 1032 aa13.1□□□□□ -0.31
PTCH1-207ENST00000429896 C12orf76Q8N812 135 aaPredicted RBP13.1□□□□□ -0.31
PTCH1-207ENST00000429896 TTYH3Q9C0H2 523 aa13.1□□□□□ -0.31
PTCH1-207ENST00000429896 POLMQ9NP87 494 aaPredicted RBP13.1□□□□□ -0.31
PTCH1-207ENST00000429896 GKN1Q9NS71 199 aa13.1□□□□□ -0.31
PTCH1-207ENST00000429896 PCMTD2Q9NV79 361 aa13.1□□□□□ -0.31
PTCH1-207ENST00000429896 SHOC2Q9UQ13 582 aa13.1□□□□□ -0.31
PTCH1-207ENST00000429896 IFRD1O00458 451 aaPredicted RBP13.1□□□□□ -0.31
PTCH1-207ENST00000429896 LIASO43766 372 aa13.1□□□□□ -0.31
PTCH1-207ENST00000429896 PSMD8P48556 350 aa13.1□□□□□ -0.31
PTCH1-207ENST00000429896 DSG1Q02413 1049 aa13.1□□□□□ -0.31
PTCH1-207ENST00000429896 GNA12Q03113 381 aa13.1□□□□□ -0.31
PTCH1-207ENST00000429896 FLCNQ8NFG4 579 aa13.1□□□□□ -0.31
PTCH1-207ENST00000429896 MAGEH1Q9H213 219 aa13.1□□□□□ -0.31
PTCH1-207ENST00000429896 ACTR5Q9H9F9 607 aaPredicted RBP13.1□□□□□ -0.31
PTCH1-207ENST00000429896 IL1RL2Q9HB29 575 aa13.1□□□□□ -0.31
PTCH1-207ENST00000429896 CHCHD3Q9NX63 227 aaKnown RBP13.1□□□□□ -0.31
PTCH1-207ENST00000429896 ADAMTSL1Q8N6G6 1762 aa13.1□□□□□ -0.31
PTCH1-207ENST00000429896 EDIL3O43854 480 aa13.1□□□□□ -0.31
PTCH1-207ENST00000429896 OAZ2O95190 189 aa13.1□□□□□ -0.31
PTCH1-207ENST00000429896 MGAT1P26572 445 aa13.1□□□□□ -0.31
PTCH1-207ENST00000429896 RFX3P48380 749 aa13.1□□□□□ -0.31
PTCH1-207ENST00000429896 ACTN3Q08043 901 aaPredicted RBP13.1□□□□□ -0.31
PTCH1-207ENST00000429896 ZNF662Q6ZS27 426 aa13.1□□□□□ -0.31
PTCH1-207ENST00000429896 SLC35F5Q8WV83 523 aa13.1□□□□□ -0.31
PTCH1-207ENST00000429896 EXOC2Q96KP1 924 aa13.1□□□□□ -0.31
PTCH1-207ENST00000429896 LGMNQ99538 433 aa13.1□□□□□ -0.31
PTCH1-207ENST00000429896 STX18Q9P2W9 335 aaKnown RBP13.1□□□□□ -0.31
PTCH1-207ENST00000429896 TGM5O43548 720 aa13.09□□□□□ -0.31
PTCH1-207ENST00000429896 CDH16O75309 829 aa13.09□□□□□ -0.31
PTCH1-207ENST00000429896 LRCH4O75427 683 aa13.09□□□□□ -0.31
PTCH1-207ENST00000429896 MGAT3Q09327 533 aa13.09□□□□□ -0.31
PTCH1-207ENST00000429896 XRCC4Q13426 336 aa13.09□□□□□ -0.31
PTCH1-207ENST00000429896 DMC1Q14565 340 aa13.09□□□□□ -0.31
PTCH1-207ENST00000429896 XYLT2Q9H1B5 865 aa13.09□□□□□ -0.31
PTCH1-207ENST00000429896 WDR27A2RRH5 827 aa13.09□□□□□ -0.31
PTCH1-207ENST00000429896 ZNF7P17097 686 aaPredicted RBP13.09□□□□□ -0.31
PTCH1-207ENST00000429896 TCN1P20061 433 aaPredicted RBP13.09□□□□□ -0.31
PTCH1-207ENST00000429896 RAB33AQ14088 237 aa13.09□□□□□ -0.31
PTCH1-207ENST00000429896 CIR1Q86X95 450 aaPredicted RBP13.09□□□□□ -0.31
PTCH1-207ENST00000429896 OR10T2Q8NGX3 314 aa13.09□□□□□ -0.31
PTCH1-207ENST00000429896 ATP6V1G3Q96LB4 118 aa13.09□□□□□ -0.31
PTCH1-207ENST00000429896 RCCD1A6NED2 376 aa13.09□□□□□ -0.31
PTCH1-207ENST00000429896 LRIG3Q6UXM1 1119 aa13.09□□□□□ -0.31
PTCH1-207ENST00000429896 BORCS6Q96GS4 357 aa13.09□□□□□ -0.31
PTCH1-207ENST00000429896 ADNPQ9H2P0 1102 aa13.09□□□□□ -0.31
PTCH1-207ENST00000429896 MARCOQ9UEW3 520 aaPredicted RBP13.09□□□□□ -0.31
PTCH1-207ENST00000429896 M0QZQ0 153 aa13.09□□□□□ -0.31
PTCH1-207ENST00000429896 PRNPP04156 253 aa13.09□□□□□ -0.31
PTCH1-207ENST00000429896 ENO1P06733 434 aaKnown RBP13.09□□□□□ -0.31
PTCH1-207ENST00000429896 OR56A5P0C7T3 313 aa13.09□□□□□ -0.31
PTCH1-207ENST00000429896 ABL2P42684 1182 aa13.09□□□□□ -0.31
PTCH1-207ENST00000429896 MARCKSL1P49006 195 aa13.09□□□□□ -0.31
PTCH1-207ENST00000429896 C21orf59P57076 290 aa13.09□□□□□ -0.31
PTCH1-207ENST00000429896 PLCL1Q15111 1095 aa13.09□□□□□ -0.31
PTCH1-207ENST00000429896 WDR93Q6P2C0 686 aa13.09□□□□□ -0.31
PTCH1-207ENST00000429896 SLC24A3Q9HC58 644 aa13.09□□□□□ -0.31
PTCH1-207ENST00000429896 TIMM44O43615 452 aa13.09□□□□□ -0.31
PTCH1-207ENST00000429896 ASLP04424 464 aa13.09□□□□□ -0.31
PTCH1-207ENST00000429896 NDST2P52849 883 aa13.09□□□□□ -0.31
PTCH1-207ENST00000429896 PLIN5Q00G26 463 aa13.09□□□□□ -0.31
PTCH1-207ENST00000429896 ST13P4Q8IZP2 240 aaPredicted RBP13.09□□□□□ -0.31
PTCH1-207ENST00000429896 RTL3Q8N8U3 475 aaKnown RBP13.09□□□□□ -0.31
PTCH1-207ENST00000429896 EVA1BQ9NVM1 165 aa13.09□□□□□ -0.31
PTCH1-207ENST00000429896 GRXCR1A8MXD5 290 aa13.08□□□□□ -0.31
PTCH1-207ENST00000429896 DGKIO75912 1065 aa13.08□□□□□ -0.31
PTCH1-207ENST00000429896 CYP11A1P05108 521 aa13.08□□□□□ -0.31
PTCH1-207ENST00000429896 MAGEA9P43362 315 aa13.08□□□□□ -0.31
PTCH1-207ENST00000429896 MAXP61244 160 aa13.08□□□□□ -0.31
PTCH1-207ENST00000429896 SLC20A2Q08357 652 aa13.08□□□□□ -0.31
PTCH1-207ENST00000429896 ILF2Q12905 390 aaKnown RBP13.08□□□□□ -0.31
PTCH1-207ENST00000429896 SPANXN3Q5MJ09 141 aa13.08□□□□□ -0.31
PTCH1-207ENST00000429896 SYPL2Q5VXT5 272 aa13.08□□□□□ -0.31
PTCH1-207ENST00000429896 SLC22A17Q8WUG5 538 aa13.08□□□□□ -0.31
PTCH1-207ENST00000429896 HES6Q96HZ4 224 aa13.08□□□□□ -0.31
PTCH1-207ENST00000429896 FAM96AQ9H5X1 160 aa13.08□□□□□ -0.31
PTCH1-207ENST00000429896 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.08□□□□□ -0.31
PTCH1-207ENST00000429896 SNX5Q9Y5X3 404 aa13.08□□□□□ -0.31
PTCH1-207ENST00000429896 TBC1D3DA0A087WVF3 549 aa13.08□□□□□ -0.32
PTCH1-207ENST00000429896 TBC1D3IA0A087WXS9 549 aa13.08□□□□□ -0.32
PTCH1-207ENST00000429896 TBC1D3EA0A087X179 549 aa13.08□□□□□ -0.32
PTCH1-207ENST00000429896 TBC1D3KA0A087X1G2 549 aa13.08□□□□□ -0.32
PTCH1-207ENST00000429896 TBC1D3FA6NER0 549 aaPredicted RBP13.08□□□□□ -0.32
PTCH1-207ENST00000429896 TBC1D3LB9A6J9 549 aa13.08□□□□□ -0.32
PTCH1-207ENST00000429896 MYO1CO00159 1063 aa13.08□□□□□ -0.32
PTCH1-207ENST00000429896 LRIG2O94898 1065 aa13.08□□□□□ -0.32
PTCH1-207ENST00000429896 LMNAP02545 664 aaKnown RBP13.08□□□□□ -0.32
PTCH1-207ENST00000429896 TBC1D3HP0C7X1 549 aa13.08□□□□□ -0.32
PTCH1-207ENST00000429896 CTSEP14091 401 aa13.08□□□□□ -0.32
PTCH1-207ENST00000429896 CYTH1Q15438 398 aa13.08□□□□□ -0.32
PTCH1-207ENST00000429896 FSCBQ5H9T9 825 aa13.08□□□□□ -0.32
PTCH1-207ENST00000429896 MROH9Q5TGP6 573 aa13.08□□□□□ -0.32
PTCH1-207ENST00000429896 TBC1D3GQ6DHY5 549 aa13.08□□□□□ -0.32
PTCH1-207ENST00000429896 TBC1D3CQ6IPX1 549 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms