RNA–Protein interactions for RNA: ENST00000429277.6

LDB3-205, Transcript of LIM domain binding 3, humanhuman

TSL 2 BASIC

Gene LDB3, Length 5,436 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-205ENST00000429277 HIST1H2ABP04908 130 aa12.94□□□□□ -0.34
LDB3-205ENST00000429277 UMPSP11172 480 aa12.94□□□□□ -0.34
LDB3-205ENST00000429277 CCDC130P13994 396 aa12.94□□□□□ -0.34
LDB3-205ENST00000429277 PPIBP23284 216 aaKnown RBP12.94□□□□□ -0.34
LDB3-205ENST00000429277 LRPAP1P30533 357 aa12.94□□□□□ -0.34
LDB3-205ENST00000429277 DRG2P55039 364 aaKnown RBP12.94□□□□□ -0.34
LDB3-205ENST00000429277 MRPS6P82932 125 aaKnown RBP12.94□□□□□ -0.34
LDB3-205ENST00000429277 GRM3Q14832 879 aa12.94□□□□□ -0.34
LDB3-205ENST00000429277 LRRC74BQ6ZQY2 392 aa12.94□□□□□ -0.34
LDB3-205ENST00000429277 HIST3H2AQ7L7L0 130 aa12.94□□□□□ -0.34
LDB3-205ENST00000429277 PEG10Q86TG7 708 aaKnown RBP12.94□□□□□ -0.34
LDB3-205ENST00000429277 ZNF276Q8N554 614 aa12.94□□□□□ -0.34
LDB3-205ENST00000429277 ANKRD52Q8NB46 1076 aa12.94□□□□□ -0.34
LDB3-205ENST00000429277 HIST1H2ACQ93077 130 aa12.94□□□□□ -0.34
LDB3-205ENST00000429277 RIBC2Q9H4K1 309 aa12.94□□□□□ -0.34
LDB3-205ENST00000429277 CCDC167Q9P0B6 97 aa12.94□□□□□ -0.34
LDB3-205ENST00000429277 VWDEQ8N2E2 1590 aa12.94□□□□□ -0.34
LDB3-205ENST00000429277 SALL3Q9BXA9 1300 aa12.94□□□□□ -0.34
LDB3-205ENST00000429277 ITGAVP06756 1048 aa12.94□□□□□ -0.34
LDB3-205ENST00000429277 CDH8P55286 799 aa12.94□□□□□ -0.34
LDB3-205ENST00000429277 CATSPERGQ6ZRH7 1159 aa12.94□□□□□ -0.34
LDB3-205ENST00000429277 PHF13Q86YI8 300 aaPredicted RBP12.94□□□□□ -0.34
LDB3-205ENST00000429277 CERS2Q96G23 380 aa12.94□□□□□ -0.34
LDB3-205ENST00000429277 GAD1Q99259 594 aa12.94□□□□□ -0.34
LDB3-205ENST00000429277 CEP41Q9BYV8 373 aa12.94□□□□□ -0.34
LDB3-205ENST00000429277 ASAH2Q9NR71 780 aa12.94□□□□□ -0.34
LDB3-205ENST00000429277 ATP6V1HQ9UI12 483 aa12.94□□□□□ -0.34
LDB3-205ENST00000429277 MT-CO1P00395 513 aa12.94□□□□□ -0.34
LDB3-205ENST00000429277 TNK2Q07912 1038 aa12.94□□□□□ -0.34
LDB3-205ENST00000429277 BNIP2Q12982 314 aa12.94□□□□□ -0.34
LDB3-205ENST00000429277 APOBEC3HQ6NTF7 200 aaKnown RBP12.94□□□□□ -0.34
LDB3-205ENST00000429277 TTC27Q6P3X3 843 aa12.94□□□□□ -0.34
LDB3-205ENST00000429277 ZNF662Q6ZS27 426 aa12.94□□□□□ -0.34
LDB3-205ENST00000429277 R3HCC1LQ7Z5L2 792 aaKnown RBP12.94□□□□□ -0.34
LDB3-205ENST00000429277 SH3RF1Q7Z6J0 888 aa12.94□□□□□ -0.34
LDB3-205ENST00000429277 COMMD2Q86X83 199 aa12.94□□□□□ -0.34
LDB3-205ENST00000429277 DEPDC4Q8N2C3 294 aa12.94□□□□□ -0.34
LDB3-205ENST00000429277 LRRC52Q8N7C0 313 aa12.94□□□□□ -0.34
LDB3-205ENST00000429277 STK32AQ8WU08 396 aa12.94□□□□□ -0.34
LDB3-205ENST00000429277 PTCD3Q96EY7 689 aaKnown RBP12.94□□□□□ -0.34
LDB3-205ENST00000429277 DERAQ9Y315 318 aa12.94□□□□□ -0.34
LDB3-205ENST00000429277 DCXO43602 365 aa12.93□□□□□ -0.34
LDB3-205ENST00000429277 MGRN1O60291 552 aa12.93□□□□□ -0.34
LDB3-205ENST00000429277 CSDE1O75534 798 aaKnown RBP12.93□□□□□ -0.34
LDB3-205ENST00000429277 PSMD10O75832 226 aa12.93□□□□□ -0.34
LDB3-205ENST00000429277 CD101Q93033 1021 aa12.93□□□□□ -0.34
LDB3-205ENST00000429277 OMDQ99983 421 aa12.93□□□□□ -0.34
LDB3-205ENST00000429277 HMG20AQ9NP66 347 aa12.93□□□□□ -0.34
LDB3-205ENST00000429277 BTBD7Q9P203 1132 aa12.93□□□□□ -0.34
LDB3-205ENST00000429277 ZMYM5Q9UJ78 669 aa12.93□□□□□ -0.34
LDB3-205ENST00000429277 MTF2Q9Y483 593 aaPredicted RBP12.93□□□□□ -0.34
LDB3-205ENST00000429277 ASNA1O43681 348 aa12.93□□□□□ -0.34
LDB3-205ENST00000429277 SMNDC1O75940 238 aaKnown RBP eCLIP12.93□□□□□ -0.34
LDB3-205ENST00000429277 PTPRAP18433 802 aa12.93□□□□□ -0.34
LDB3-205ENST00000429277 ADRA1DP25100 572 aa12.93□□□□□ -0.34
LDB3-205ENST00000429277 MAMLD1Q13495 774 aa12.93□□□□□ -0.34
LDB3-205ENST00000429277 CCDC157Q569K6 752 aa12.93□□□□□ -0.34
LDB3-205ENST00000429277 ZDHHC20Q5W0Z9 365 aa12.93□□□□□ -0.34
LDB3-205ENST00000429277 KIAA0408Q6ZU52 694 aa12.93□□□□□ -0.34
LDB3-205ENST00000429277 GATAD2AQ86YP4 633 aa12.93□□□□□ -0.34
LDB3-205ENST00000429277 TMEM199Q8N511 208 aa12.93□□□□□ -0.34
LDB3-205ENST00000429277 CYP2W1Q8TAV3 490 aa12.93□□□□□ -0.34
LDB3-205ENST00000429277 ELMO1Q92556 727 aa12.93□□□□□ -0.34
LDB3-205ENST00000429277 MRPL57Q9BQC6 102 aaKnown RBP12.93□□□□□ -0.34
LDB3-205ENST00000429277 ZDHHC6Q9H6R6 413 aa12.93□□□□□ -0.34
LDB3-205ENST00000429277 ASB8Q9H765 288 aa12.93□□□□□ -0.34
LDB3-205ENST00000429277 UBIAD1Q9Y5Z9 338 aa12.93□□□□□ -0.34
LDB3-205ENST00000429277 TBC1D3BA6NDS4 549 aa12.93□□□□□ -0.34
LDB3-205ENST00000429277 ZNF549Q6P9A3 640 aa12.93□□□□□ -0.34
LDB3-205ENST00000429277 RTL3Q8N8U3 475 aaKnown RBP12.93□□□□□ -0.34
LDB3-205ENST00000429277 KLHL1Q9NR64 748 aa12.93□□□□□ -0.34
LDB3-205ENST00000429277 KCND1Q9NSA2 647 aa12.93□□□□□ -0.34
LDB3-205ENST00000429277 GIT1Q9Y2X7 761 aa12.93□□□□□ -0.34
LDB3-205ENST00000429277 MEGF6O75095 1541 aa12.93□□□□□ -0.34
LDB3-205ENST00000429277 FAM237AA0A1B0GTK4 181 aa12.93□□□□□ -0.34
LDB3-205ENST00000429277 BIRC5O15392 142 aa12.93□□□□□ -0.34
LDB3-205ENST00000429277 ADCYAP1R1P41586 468 aa12.93□□□□□ -0.34
LDB3-205ENST00000429277 HNMTP50135 292 aa12.93□□□□□ -0.34
LDB3-205ENST00000429277 PSMD4P55036 377 aaKnown RBP12.93□□□□□ -0.34
LDB3-205ENST00000429277 BRMS1LQ5PSV4 323 aa12.93□□□□□ -0.34
LDB3-205ENST00000429277 EIF3MQ7L2H7 374 aaKnown RBP12.93□□□□□ -0.34
LDB3-205ENST00000429277 RNF157Q96PX1 679 aa12.93□□□□□ -0.34
LDB3-205ENST00000429277 CRNNQ9UBG3 495 aaPredicted RBP12.93□□□□□ -0.34
LDB3-205ENST00000429277 KLQ9UEF7 1012 aa12.93□□□□□ -0.34
LDB3-205ENST00000429277 FBXL21Q9UKT6 434 aa12.93□□□□□ -0.34
LDB3-205ENST00000429277 RPL26L1Q9UNX3 145 aaKnown RBP12.93□□□□□ -0.34
LDB3-205ENST00000429277 SIK3Q9Y2K2 1263 aa12.93□□□□□ -0.34
LDB3-205ENST00000429277 TPP1O14773 563 aa12.92□□□□□ -0.34
LDB3-205ENST00000429277 PCSK2P16519 638 aa12.92□□□□□ -0.34
LDB3-205ENST00000429277 TAF13Q15543 124 aa12.92□□□□□ -0.34
LDB3-205ENST00000429277 NDUFAF6Q330K2 333 aa12.92□□□□□ -0.34
LDB3-205ENST00000429277 ZNF57Q68EA5 555 aaPredicted RBP12.92□□□□□ -0.34
LDB3-205ENST00000429277 FAM180AQ6UWF9 173 aa12.92□□□□□ -0.34
LDB3-205ENST00000429277 FAM71AQ8IYT1 594 aa12.92□□□□□ -0.34
LDB3-205ENST00000429277 ALLCQ8N6M5 410 aa12.92□□□□□ -0.34
LDB3-205ENST00000429277 CKAP2Q8WWK9 683 aa12.92□□□□□ -0.34
LDB3-205ENST00000429277 PIF1Q9H611 641 aa12.92□□□□□ -0.34
LDB3-205ENST00000429277 GGA2Q9UJY4 613 aa12.92□□□□□ -0.34
LDB3-205ENST00000429277 C3orf18Q9UK00 162 aa12.92□□□□□ -0.34
LDB3-205ENST00000429277 PIK3C2BO00750 1634 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms