RNA–Protein interactions for RNA: ENST00000428861.1

ATG4B-210, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 580 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-210ENST00000428861 DEF6Q9H4E7 631 aa10.94□□□□□ -0.66
ATG4B-210ENST00000428861 PCDH18Q9HCL0 1135 aa10.94□□□□□ -0.66
ATG4B-210ENST00000428861 STAU2Q9NUL3 570 aaKnown RBP eCLIP10.94□□□□□ -0.66
ATG4B-210ENST00000428861 ZNHIT6Q9NWK9 470 aaKnown RBP10.94□□□□□ -0.66
ATG4B-210ENST00000428861 CTTNBP2NLQ9P2B4 639 aa10.94□□□□□ -0.66
ATG4B-210ENST00000428861 HECAQ9UBI9 543 aaPredicted RBP10.94□□□□□ -0.66
ATG4B-210ENST00000428861 IL36AQ9UHA7 158 aa10.94□□□□□ -0.66
ATG4B-210ENST00000428861 TFR2Q9UP52 801 aa10.94□□□□□ -0.66
ATG4B-210ENST00000428861 CACNA1AO00555 2505 aa10.93□□□□□ -0.66
ATG4B-210ENST00000428861 CXorf51AA0A1B0GTR3 108 aa10.93□□□□□ -0.66
ATG4B-210ENST00000428861 A0A1B0GTW7 788 aa10.93□□□□□ -0.66
ATG4B-210ENST00000428861 A0A1B0GVT2 93 aa10.93□□□□□ -0.66
ATG4B-210ENST00000428861 EIF3CLB5ME19 914 aaKnown RBP10.93□□□□□ -0.66
ATG4B-210ENST00000428861 C1QTNF3-AMACRE9PGA6 284 aa10.93□□□□□ -0.66
ATG4B-210ENST00000428861 MYO1FO00160 1098 aa10.93□□□□□ -0.66
ATG4B-210ENST00000428861 KPNA3O00505 521 aaPredicted RBP10.93□□□□□ -0.66
ATG4B-210ENST00000428861 ARHGAP33O14559 1287 aa10.93□□□□□ -0.66
ATG4B-210ENST00000428861 BCAT2O15382 392 aaPredicted RBP10.93□□□□□ -0.66
ATG4B-210ENST00000428861 INSIG1O15503 277 aa10.93□□□□□ -0.66
ATG4B-210ENST00000428861 PLRG1O43660 514 aaKnown RBP10.93□□□□□ -0.66
ATG4B-210ENST00000428861 GJB3O75712 270 aa10.93□□□□□ -0.66
ATG4B-210ENST00000428861 PROSCO94903 275 aa10.93□□□□□ -0.66
ATG4B-210ENST00000428861 TPM1P09493 284 aa10.93□□□□□ -0.66
ATG4B-210ENST00000428861 HTR7P34969 479 aa10.93□□□□□ -0.66
ATG4B-210ENST00000428861 ETFBP38117 255 aa10.93□□□□□ -0.66
ATG4B-210ENST00000428861 DPP6P42658 865 aa10.93□□□□□ -0.66
ATG4B-210ENST00000428861 HCAR3P49019 387 aa10.93□□□□□ -0.66
ATG4B-210ENST00000428861 CSNK1EP49674 416 aaKnown RBP10.93□□□□□ -0.66
ATG4B-210ENST00000428861 NDST2P52849 883 aa10.93□□□□□ -0.66
ATG4B-210ENST00000428861 GRIK2Q13002 908 aa10.93□□□□□ -0.66
ATG4B-210ENST00000428861 PARP15Q460N3 678 aa10.93□□□□□ -0.66
ATG4B-210ENST00000428861 BOLA3Q53S33 107 aa10.93□□□□□ -0.66
ATG4B-210ENST00000428861 FAM46CQ5VWP2 391 aa10.93□□□□□ -0.66
ATG4B-210ENST00000428861 DSG4Q86SJ6 1040 aa10.93□□□□□ -0.66
ATG4B-210ENST00000428861 ZNF354CQ86Y25 554 aa10.93□□□□□ -0.66
ATG4B-210ENST00000428861 SLC35G2Q8TBE7 412 aa10.93□□□□□ -0.66
ATG4B-210ENST00000428861 FAM71BQ8TC56 605 aa10.93□□□□□ -0.66
ATG4B-210ENST00000428861 CTNNBL1Q8WYA6 563 aaPredicted RBP10.93□□□□□ -0.66
ATG4B-210ENST00000428861 ISG20Q96AZ6 181 aaKnown RBP10.93□□□□□ -0.66
ATG4B-210ENST00000428861 MRFAP1L1Q96HT8 127 aa10.93□□□□□ -0.66
ATG4B-210ENST00000428861 CCDC42Q96M95 316 aa10.93□□□□□ -0.66
ATG4B-210ENST00000428861 NSMCE3Q96MG7 304 aa10.93□□□□□ -0.66
ATG4B-210ENST00000428861 SLC6A18Q96N87 628 aa10.93□□□□□ -0.66
ATG4B-210ENST00000428861 CSPG4P5Q96PW8 444 aa10.93□□□□□ -0.66
ATG4B-210ENST00000428861 EIF3CQ99613 913 aaKnown RBP10.93□□□□□ -0.66
ATG4B-210ENST00000428861 HEPHQ9BQS7 1158 aa10.93□□□□□ -0.66
ATG4B-210ENST00000428861 GTPBP2Q9BX10 602 aaKnown RBP10.93□□□□□ -0.66
ATG4B-210ENST00000428861 IL21RQ9HBE5 538 aa10.93□□□□□ -0.66
ATG4B-210ENST00000428861 TM9SF3Q9HD45 589 aa10.93□□□□□ -0.66
ATG4B-210ENST00000428861 TMEM9BQ9NQ34 198 aa10.93□□□□□ -0.66
ATG4B-210ENST00000428861 KLHL11Q9NVR0 708 aa10.93□□□□□ -0.66
ATG4B-210ENST00000428861 UVRAGQ9P2Y5 699 aa10.93□□□□□ -0.66
ATG4B-210ENST00000428861 LHX3Q9UBR4 397 aa10.93□□□□□ -0.66
ATG4B-210ENST00000428861 CACNA1EQ15878 2313 aa10.93□□□□□ -0.66
ATG4B-210ENST00000428861 KNL1Q8NG31 2342 aa10.93□□□□□ -0.66
ATG4B-210ENST00000428861 ASCC3Q8N3C0 2202 aaKnown RBP10.92□□□□□ -0.66
ATG4B-210ENST00000428861 TBC1D3DA0A087WVF3 549 aa10.92□□□□□ -0.66
ATG4B-210ENST00000428861 TBC1D3IA0A087WXS9 549 aa10.92□□□□□ -0.66
ATG4B-210ENST00000428861 TBC1D3EA0A087X179 549 aa10.92□□□□□ -0.66
ATG4B-210ENST00000428861 TBC1D3KA0A087X1G2 549 aa10.92□□□□□ -0.66
ATG4B-210ENST00000428861 A0A1W2PPC4 97 aa10.92□□□□□ -0.66
ATG4B-210ENST00000428861 MED19A0JLT2 244 aaPredicted RBP10.92□□□□□ -0.66
ATG4B-210ENST00000428861 TBC1D3FA6NER0 549 aaPredicted RBP10.92□□□□□ -0.66
ATG4B-210ENST00000428861 LRRC72A6NJI9 287 aa10.92□□□□□ -0.66
ATG4B-210ENST00000428861 TMEM110-MUSTN1A8MSY1 372 aa10.92□□□□□ -0.66
ATG4B-210ENST00000428861 TBC1D3LB9A6J9 549 aa10.92□□□□□ -0.66
ATG4B-210ENST00000428861 DAPK3O43293 454 aa10.92□□□□□ -0.66
ATG4B-210ENST00000428861 PRAMEF11O60813 436 aa10.92□□□□□ -0.66
ATG4B-210ENST00000428861 GSRP00390 522 aa10.92□□□□□ -0.66
ATG4B-210ENST00000428861 PRNPP04156 253 aa10.92□□□□□ -0.66
ATG4B-210ENST00000428861 WNT1P04628 370 aa10.92□□□□□ -0.66
ATG4B-210ENST00000428861 TBC1D3HP0C7X1 549 aa10.92□□□□□ -0.66
ATG4B-210ENST00000428861 GNSP15586 552 aa10.92□□□□□ -0.66
ATG4B-210ENST00000428861 CD27P26842 260 aa10.92□□□□□ -0.66
ATG4B-210ENST00000428861 MAT2AP31153 395 aaKnown RBP10.92□□□□□ -0.66
ATG4B-210ENST00000428861 GJC1P36383 396 aa10.92□□□□□ -0.66
ATG4B-210ENST00000428861 RGRP47804 291 aa10.92□□□□□ -0.66
ATG4B-210ENST00000428861 TSR1Q2NL82 804 aaKnown RBP10.92□□□□□ -0.66
ATG4B-210ENST00000428861 KIF19Q2TAC6 998 aa10.92□□□□□ -0.66
ATG4B-210ENST00000428861 UAP1L1Q3KQV9 507 aa10.92□□□□□ -0.66
ATG4B-210ENST00000428861 TBC1D3GQ6DHY5 549 aa10.92□□□□□ -0.66
ATG4B-210ENST00000428861 TBC1D3CQ6IPX1 549 aa10.92□□□□□ -0.66
ATG4B-210ENST00000428861 PARS2Q7L3T8 475 aaKnown RBP10.92□□□□□ -0.66
ATG4B-210ENST00000428861 DGLUCYQ7Z3D6 616 aa10.92□□□□□ -0.66
ATG4B-210ENST00000428861 PLPP6Q8IY26 295 aa10.92□□□□□ -0.66
ATG4B-210ENST00000428861 TBC1D3Q8IZP1 549 aaPredicted RBP10.92□□□□□ -0.66
ATG4B-210ENST00000428861 MINDY1Q8N5J2 469 aa10.92□□□□□ -0.66
ATG4B-210ENST00000428861 OR2AP1Q8NGE2 309 aa10.92□□□□□ -0.66
ATG4B-210ENST00000428861 TEKT4Q8WW24 435 aa10.92□□□□□ -0.66
ATG4B-210ENST00000428861 EXOC2Q96KP1 924 aa10.92□□□□□ -0.66
ATG4B-210ENST00000428861 NCAPGQ9BPX3 1015 aa10.92□□□□□ -0.66
ATG4B-210ENST00000428861 ZDHHC6Q9H6R6 413 aa10.92□□□□□ -0.66
ATG4B-210ENST00000428861 SUSD2Q9UGT4 822 aa10.92□□□□□ -0.66
ATG4B-210ENST00000428861 HPCAL4Q9UM19 191 aa10.92□□□□□ -0.66
ATG4B-210ENST00000428861 CNOT1A5YKK6 2376 aaKnown RBP10.92□□□□□ -0.66
ATG4B-210ENST00000428861 DOCK9Q9BZ29 2069 aa10.91□□□□□ -0.66
ATG4B-210ENST00000428861 ZSCAN5CA6NGD5 496 aaPredicted RBP10.91□□□□□ -0.66
ATG4B-210ENST00000428861 H3BRJ5 948 aa10.91□□□□□ -0.66
ATG4B-210ENST00000428861 DFFAO00273 331 aa10.91□□□□□ -0.66
ATG4B-210ENST00000428861 KCNK3O14649 394 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms