RNA–Protein interactions for RNA: ENST00000428643.1

HMGA1P4-201, Transcript of high mobility group AT-hook 1 pseudogene 4, humanhuman

TSL 2 BASIC

Gene HMGA1P4, Length 334 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P4-201ENST00000428643 C4orf22Q6V702 233 aa8.04□□□□□ -1.12
HMGA1P4-201ENST00000428643 Q6ZVU0 165 aa8.04□□□□□ -1.12
HMGA1P4-201ENST00000428643 PID1Q7Z2X4 250 aa8.04□□□□□ -1.12
HMGA1P4-201ENST00000428643 UBALD2Q8IYN6 164 aa8.04□□□□□ -1.12
HMGA1P4-201ENST00000428643 GJD3Q8N144 294 aa8.04□□□□□ -1.12
HMGA1P4-201ENST00000428643 SH2D3CQ8N5H7 860 aa8.04□□□□□ -1.12
HMGA1P4-201ENST00000428643 TEX26Q8N6G2 289 aa8.04□□□□□ -1.12
HMGA1P4-201ENST00000428643 PAF1Q8N7H5 531 aa8.04□□□□□ -1.12
HMGA1P4-201ENST00000428643 CNTD1Q8N815 330 aa8.04□□□□□ -1.12
HMGA1P4-201ENST00000428643 TSEN2Q8NCE0 465 aaKnown RBP8.04□□□□□ -1.12
HMGA1P4-201ENST00000428643 OR6K2Q8NGY2 324 aa8.04□□□□□ -1.12
HMGA1P4-201ENST00000428643 LRRC45Q96CN5 670 aa8.04□□□□□ -1.12
HMGA1P4-201ENST00000428643 MRGPRX3Q96LB0 322 aa8.04□□□□□ -1.12
HMGA1P4-201ENST00000428643 TEKT5Q96M29 485 aa8.04□□□□□ -1.12
HMGA1P4-201ENST00000428643 GDAP1L1Q96MZ0 367 aa8.04□□□□□ -1.12
HMGA1P4-201ENST00000428643 NECAB3Q96P71 396 aaPredicted RBP8.04□□□□□ -1.12
HMGA1P4-201ENST00000428643 PSKH2Q96QS6 385 aa8.04□□□□□ -1.12
HMGA1P4-201ENST00000428643 SEMA3CQ99985 751 aa8.04□□□□□ -1.12
HMGA1P4-201ENST00000428643 MGME1Q9BQP7 344 aa8.04□□□□□ -1.12
HMGA1P4-201ENST00000428643 ERP44Q9BS26 406 aa8.04□□□□□ -1.12
HMGA1P4-201ENST00000428643 COL25A1Q9BXS0 654 aaPredicted RBP8.04□□□□□ -1.12
HMGA1P4-201ENST00000428643 CEP44Q9C0F1 390 aa8.04□□□□□ -1.12
HMGA1P4-201ENST00000428643 DPH5Q9H2P9 285 aa8.04□□□□□ -1.12
HMGA1P4-201ENST00000428643 GLOD4Q9HC38 313 aa8.04□□□□□ -1.12
HMGA1P4-201ENST00000428643 FBRSL1Q9HCM7 1045 aaKnown RBP8.04□□□□□ -1.12
HMGA1P4-201ENST00000428643 RAB6BQ9NRW1 208 aa8.04□□□□□ -1.12
HMGA1P4-201ENST00000428643 LHX3Q9UBR4 397 aa8.04□□□□□ -1.12
HMGA1P4-201ENST00000428643 MUTYHQ9UIF7 546 aa8.04□□□□□ -1.12
HMGA1P4-201ENST00000428643 NDRG2Q9UN36 371 aaKnown RBP8.04□□□□□ -1.12
HMGA1P4-201ENST00000428643 UTP11Q9Y3A2 253 aaKnown RBP8.04□□□□□ -1.12
HMGA1P4-201ENST00000428643 NEU2Q9Y3R4 380 aa8.04□□□□□ -1.12
HMGA1P4-201ENST00000428643 TTC28Q96AY4 2481 aa8.04□□□□□ -1.12
HMGA1P4-201ENST00000428643 CXorf51AA0A1B0GTR3 108 aa8.03□□□□□ -1.12
HMGA1P4-201ENST00000428643 ESYT3A0FGR9 886 aa8.03□□□□□ -1.12
HMGA1P4-201ENST00000428643 GOLGA6CA6NDK9 693 aa8.03□□□□□ -1.12
HMGA1P4-201ENST00000428643 GOLGA6BA6NDN3 693 aa8.03□□□□□ -1.12
HMGA1P4-201ENST00000428643 TTC34A8MYJ7 566 aa8.03□□□□□ -1.12
HMGA1P4-201ENST00000428643 MAN2B1O00754 1011 aa8.03□□□□□ -1.12
HMGA1P4-201ENST00000428643 MUSKO15146 869 aa8.03□□□□□ -1.12
HMGA1P4-201ENST00000428643 GJB3O75712 270 aa8.03□□□□□ -1.12
HMGA1P4-201ENST00000428643 METTL18O95568 372 aa8.03□□□□□ -1.12
HMGA1P4-201ENST00000428643 CD160O95971 181 aa8.03□□□□□ -1.12
HMGA1P4-201ENST00000428643 EGFP01133 1207 aa8.03□□□□□ -1.12
HMGA1P4-201ENST00000428643 APRTP07741 180 aa8.03□□□□□ -1.12
HMGA1P4-201ENST00000428643 GOLGA6DP0CG33 693 aa8.03□□□□□ -1.12
HMGA1P4-201ENST00000428643 PRKCHP24723 683 aa8.03□□□□□ -1.12
HMGA1P4-201ENST00000428643 FDFT1P37268 417 aa8.03□□□□□ -1.12
HMGA1P4-201ENST00000428643 CD86P42081 329 aa8.03□□□□□ -1.12
HMGA1P4-201ENST00000428643 TNFRSF4P43489 277 aa8.03□□□□□ -1.12
HMGA1P4-201ENST00000428643 TNNT3P45378 269 aaPredicted RBP8.03□□□□□ -1.12
HMGA1P4-201ENST00000428643 SNRPD1P62314 119 aaKnown RBP8.03□□□□□ -1.12
HMGA1P4-201ENST00000428643 TUBB4BP68371 445 aa8.03□□□□□ -1.12
HMGA1P4-201ENST00000428643 DSC2Q02487 901 aa8.03□□□□□ -1.12
HMGA1P4-201ENST00000428643 PRKCQQ04759 706 aa8.03□□□□□ -1.12
HMGA1P4-201ENST00000428643 UBXN2BQ14CS0 331 aa8.03□□□□□ -1.12
HMGA1P4-201ENST00000428643 E2F5Q15329 346 aa8.03□□□□□ -1.12
HMGA1P4-201ENST00000428643 CYTH1Q15438 398 aa8.03□□□□□ -1.12
HMGA1P4-201ENST00000428643 DLG2Q15700 870 aa8.03□□□□□ -1.12
HMGA1P4-201ENST00000428643 PTPRNQ16849 979 aa8.03□□□□□ -1.12
HMGA1P4-201ENST00000428643 PARP6Q2NL67 630 aa8.03□□□□□ -1.12
HMGA1P4-201ENST00000428643 TMEM196Q5HYL7 178 aa8.03□□□□□ -1.12
HMGA1P4-201ENST00000428643 TJAP1Q5JTD0 557 aa8.03□□□□□ -1.12
HMGA1P4-201ENST00000428643 IZUMO3Q5VZ72 239 aa8.03□□□□□ -1.12
HMGA1P4-201ENST00000428643 FSTL4Q6MZW2 842 aa8.03□□□□□ -1.12
HMGA1P4-201ENST00000428643 ZNF852Q6ZMS4 543 aa8.03□□□□□ -1.12
HMGA1P4-201ENST00000428643 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.03□□□□□ -1.12
HMGA1P4-201ENST00000428643 CHPFQ8IZ52 775 aa8.03□□□□□ -1.12
HMGA1P4-201ENST00000428643 SIX5Q8N196 739 aa8.03□□□□□ -1.12
HMGA1P4-201ENST00000428643 PGBD5Q8N414 524 aa8.03□□□□□ -1.12
HMGA1P4-201ENST00000428643 PCDH20Q8N6Y1 951 aaKnown RBP8.03□□□□□ -1.12
HMGA1P4-201ENST00000428643 ZNF366Q8N895 744 aa8.03□□□□□ -1.12
HMGA1P4-201ENST00000428643 ZNF513Q8N8E2 541 aaPredicted RBP8.03□□□□□ -1.12
HMGA1P4-201ENST00000428643 SNF8Q96H20 258 aa8.03□□□□□ -1.12
HMGA1P4-201ENST00000428643 SHDQ96IW2 340 aa8.03□□□□□ -1.12
HMGA1P4-201ENST00000428643 PPP1R2P1Q96PQ5 205 aa8.03□□□□□ -1.12
HMGA1P4-201ENST00000428643 HINFPQ9BQA5 517 aa8.03□□□□□ -1.12
HMGA1P4-201ENST00000428643 SLC25A51Q9H1U9 297 aa8.03□□□□□ -1.12
HMGA1P4-201ENST00000428643 ZDHHC4Q9NPG8 344 aa8.03□□□□□ -1.12
HMGA1P4-201ENST00000428643 SCUBE2Q9NQ36 999 aa8.03□□□□□ -1.12
HMGA1P4-201ENST00000428643 CACNA2D2Q9NY47 1150 aa8.03□□□□□ -1.12
HMGA1P4-201ENST00000428643 GOLGA6AQ9NYA3 693 aa8.03□□□□□ -1.12
HMGA1P4-201ENST00000428643 SLCO3A1Q9UIG8 710 aa8.03□□□□□ -1.12
HMGA1P4-201ENST00000428643 XIRP2A4UGR9 3374 aa8.02□□□□□ -1.13
HMGA1P4-201ENST00000428643 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.02□□□□□ -1.13
HMGA1P4-201ENST00000428643 EDDM13A0A1B0GTR0 161 aa8.02□□□□□ -1.13
HMGA1P4-201ENST00000428643 TTC24A2A3L6 582 aaPredicted RBP8.02□□□□□ -1.13
HMGA1P4-201ENST00000428643 K7EQS6 105 aa8.02□□□□□ -1.13
HMGA1P4-201ENST00000428643 STK25O00506 426 aa8.02□□□□□ -1.13
HMGA1P4-201ENST00000428643 NDC80O14777 642 aa8.02□□□□□ -1.13
HMGA1P4-201ENST00000428643 ATP9BO43861 1147 aa8.02□□□□□ -1.13
HMGA1P4-201ENST00000428643 RNF40O75150 1001 aa8.02□□□□□ -1.13
HMGA1P4-201ENST00000428643 PMPCBO75439 489 aa8.02□□□□□ -1.13
HMGA1P4-201ENST00000428643 ANXA9O76027 345 aa8.02□□□□□ -1.13
HMGA1P4-201ENST00000428643 KLF8O95600 359 aaPredicted RBP8.02□□□□□ -1.13
HMGA1P4-201ENST00000428643 GSRP00390 522 aa8.02□□□□□ -1.13
HMGA1P4-201ENST00000428643 HLA-EP13747 358 aa8.02□□□□□ -1.13
HMGA1P4-201ENST00000428643 CD72P21854 359 aa8.02□□□□□ -1.13
HMGA1P4-201ENST00000428643 CA4P22748 312 aa8.02□□□□□ -1.13
HMGA1P4-201ENST00000428643 CD68P34810 354 aaPredicted RBP8.02□□□□□ -1.13
HMGA1P4-201ENST00000428643 TIE1P35590 1138 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms