RNA–Protein interactions for RNA: ENST00000428445.1

VARS-216, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 863 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-216ENST00000428445 ARF5P84085 180 aa16.88■□□□□ 0.29
VARS-216ENST00000428445 FAM102AQ5T9C2 384 aaPredicted RBP16.88■□□□□ 0.29
VARS-216ENST00000428445 CRTC1Q6UUV9 634 aa16.88■□□□□ 0.29
VARS-216ENST00000428445 LRRC31Q6UY01 552 aa16.88■□□□□ 0.29
VARS-216ENST00000428445 FAM131BQ86XD5 332 aa16.88■□□□□ 0.29
VARS-216ENST00000428445 XYLT1Q86Y38 959 aa16.88■□□□□ 0.29
VARS-216ENST00000428445 DRC7Q8IY82 874 aa16.88■□□□□ 0.29
VARS-216ENST00000428445 FAM71AQ8IYT1 594 aa16.88■□□□□ 0.29
VARS-216ENST00000428445 CCDC114Q96M63 670 aa16.88■□□□□ 0.29
VARS-216ENST00000428445 CFAP57Q96MR6 1250 aa16.88■□□□□ 0.29
VARS-216ENST00000428445 LGMNQ99538 433 aa16.88■□□□□ 0.29
VARS-216ENST00000428445 TM6SF2Q9BZW4 377 aa16.88■□□□□ 0.29
VARS-216ENST00000428445 PDCL3Q9H2J4 239 aa16.88■□□□□ 0.29
VARS-216ENST00000428445 NDFIP2Q9NV92 336 aa16.88■□□□□ 0.29
VARS-216ENST00000428445 KIAA1468Q9P260 1216 aa16.88■□□□□ 0.29
VARS-216ENST00000428445 ITM2BQ9Y287 266 aa16.88■□□□□ 0.29
VARS-216ENST00000428445 FADS3Q9Y5Q0 445 aa16.88■□□□□ 0.29
VARS-216ENST00000428445 HELZ2Q9BYK8 2649 aaKnown RBP16.88■□□□□ 0.29
VARS-216ENST00000428445 RP1P56715 2156 aa16.87■□□□□ 0.29
VARS-216ENST00000428445 IGLV3-10A0A075B6K4 115 aa16.87■□□□□ 0.29
VARS-216ENST00000428445 A0A1W2PNU3 283 aaPredicted RBP16.87■□□□□ 0.29
VARS-216ENST00000428445 IGLON5A6NGN9 336 aa16.87■□□□□ 0.29
VARS-216ENST00000428445 SCAMP1O15126 338 aa16.87■□□□□ 0.29
VARS-216ENST00000428445 SPINT1O43278 529 aa16.87■□□□□ 0.29
VARS-216ENST00000428445 ADRB3P13945 408 aa16.87■□□□□ 0.29
VARS-216ENST00000428445 TGM2P21980 687 aa16.87■□□□□ 0.29
VARS-216ENST00000428445 RECQLP46063 649 aaPredicted RBP16.87■□□□□ 0.29
VARS-216ENST00000428445 NEK3P51956 506 aa16.87■□□□□ 0.29
VARS-216ENST00000428445 RAPGEF1Q13905 1077 aa16.87■□□□□ 0.29
VARS-216ENST00000428445 DRAP1Q14919 205 aaPredicted RBP16.87■□□□□ 0.29
VARS-216ENST00000428445 CDKN3Q16667 212 aa16.87■□□□□ 0.29
VARS-216ENST00000428445 SLC25A52Q3SY17 297 aa16.87■□□□□ 0.29
VARS-216ENST00000428445 CARD16Q5EG05 197 aa16.87■□□□□ 0.29
VARS-216ENST00000428445 PARS2Q7L3T8 475 aaKnown RBP16.87■□□□□ 0.29
VARS-216ENST00000428445 ZNF843Q8N446 348 aa16.87■□□□□ 0.29
VARS-216ENST00000428445 NETO2Q8NC67 525 aa16.87■□□□□ 0.29
VARS-216ENST00000428445 IFI44Q8TCB0 444 aa16.87■□□□□ 0.29
VARS-216ENST00000428445 CPA5Q8WXQ8 436 aa16.87■□□□□ 0.29
VARS-216ENST00000428445 C18orf8Q96DM3 657 aa16.87■□□□□ 0.29
VARS-216ENST00000428445 PGAP3Q96FM1 320 aaPredicted RBP16.87■□□□□ 0.29
VARS-216ENST00000428445 C1orf74Q96LT6 269 aa16.87■□□□□ 0.29
VARS-216ENST00000428445 HEPHQ9BQS7 1158 aa16.87■□□□□ 0.29
VARS-216ENST00000428445 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.87■□□□□ 0.29
VARS-216ENST00000428445 TCEAL2Q9H3H9 227 aaPredicted RBP16.87■□□□□ 0.29
VARS-216ENST00000428445 ZDHHC6Q9H6R6 413 aa16.87■□□□□ 0.29
VARS-216ENST00000428445 ATP13A1Q9HD20 1204 aa16.87■□□□□ 0.29
VARS-216ENST00000428445 RRN3Q9NYV6 651 aa16.87■□□□□ 0.29
VARS-216ENST00000428445 NLGN3Q9NZ94 848 aa16.87■□□□□ 0.29
VARS-216ENST00000428445 STAP1Q9ULZ2 295 aa16.87■□□□□ 0.29
VARS-216ENST00000428445 FHOD1Q9Y613 1164 aa16.87■□□□□ 0.29
VARS-216ENST00000428445 HS3ST3A1Q9Y663 406 aa16.87■□□□□ 0.29
VARS-216ENST00000428445 COL27A1Q8IZC6 1860 aaPredicted RBP16.86■□□□□ 0.29
VARS-216ENST00000428445 CPED1A4D0V7 1026 aa16.86■□□□□ 0.29
VARS-216ENST00000428445 PMS2P1A4D2B8 440 aa16.86■□□□□ 0.29
VARS-216ENST00000428445 A6NNZ2 444 aa16.86■□□□□ 0.29
VARS-216ENST00000428445 F9P00740 461 aa16.86■□□□□ 0.29
VARS-216ENST00000428445 CYP11B1P15538 503 aa16.86■□□□□ 0.29
VARS-216ENST00000428445 L1CAMP32004 1257 aa16.86■□□□□ 0.29
VARS-216ENST00000428445 ABL2P42684 1182 aa16.86■□□□□ 0.29
VARS-216ENST00000428445 GABRB2P47870 512 aa16.86■□□□□ 0.29
VARS-216ENST00000428445 SERPINH1P50454 418 aaKnown RBP16.86■□□□□ 0.29
VARS-216ENST00000428445 CLCN6P51797 869 aa16.86■□□□□ 0.29
VARS-216ENST00000428445 CCNHP51946 323 aaPredicted RBP16.86■□□□□ 0.29
VARS-216ENST00000428445 ATP11AP98196 1134 aa16.86■□□□□ 0.29
VARS-216ENST00000428445 CCDC15Q0P6D6 951 aa16.86■□□□□ 0.29
VARS-216ENST00000428445 DEFB133Q30KQ1 61 aa16.86■□□□□ 0.29
VARS-216ENST00000428445 LRRC73Q5JTD7 316 aa16.86■□□□□ 0.29
VARS-216ENST00000428445 ACBD5Q5T8D3 534 aaPredicted RBP16.86■□□□□ 0.29
VARS-216ENST00000428445 ARHGAP40Q5TG30 622 aa16.86■□□□□ 0.29
VARS-216ENST00000428445 GUSBP11Q6P575 273 aa16.86■□□□□ 0.29
VARS-216ENST00000428445 EMC1Q8N766 993 aa16.86■□□□□ 0.29
VARS-216ENST00000428445 TMEM35BQ8NCS4 154 aa16.86■□□□□ 0.29
VARS-216ENST00000428445 ZNF548Q8NEK5 533 aaPredicted RBP16.86■□□□□ 0.29
VARS-216ENST00000428445 FEM1CQ96JP0 617 aa16.86■□□□□ 0.29
VARS-216ENST00000428445 ABCG4Q9H172 646 aa16.86■□□□□ 0.29
VARS-216ENST00000428445 HECAQ9UBI9 543 aaPredicted RBP16.86■□□□□ 0.29
VARS-216ENST00000428445 PNMA8BQ9ULN7 279 aaPredicted RBP16.86■□□□□ 0.29
VARS-216ENST00000428445 ILVBLA1L0T0 632 aa16.85■□□□□ 0.29
VARS-216ENST00000428445 TK2O00142 265 aa16.85■□□□□ 0.29
VARS-216ENST00000428445 GJB6O95452 261 aa16.85■□□□□ 0.29
VARS-216ENST00000428445 ALPPL2P10696 532 aa16.85■□□□□ 0.29
VARS-216ENST00000428445 ITIH2P19823 946 aa16.85■□□□□ 0.29
VARS-216ENST00000428445 CDH5P33151 784 aaPredicted RBP16.85■□□□□ 0.29
VARS-216ENST00000428445 RPS21P63220 83 aaKnown RBP16.85■□□□□ 0.29
VARS-216ENST00000428445 GNA12Q03113 381 aa16.85■□□□□ 0.29
VARS-216ENST00000428445 C1orf61Q13536 156 aa16.85■□□□□ 0.29
VARS-216ENST00000428445 PDE1CQ14123 709 aaPredicted RBP16.85■□□□□ 0.29
VARS-216ENST00000428445 MIIPQ5JXC2 388 aa16.85■□□□□ 0.29
VARS-216ENST00000428445 NOP9Q86U38 636 aaKnown RBP16.85■□□□□ 0.29
VARS-216ENST00000428445 ZDHHC17Q8IUH5 632 aa16.85■□□□□ 0.29
VARS-216ENST00000428445 RBFAQ8N0V3 343 aa16.85■□□□□ 0.29
VARS-216ENST00000428445 RYBPQ8N488 228 aaPredicted RBP16.85■□□□□ 0.29
VARS-216ENST00000428445 MAPK15Q8TD08 544 aa16.85■□□□□ 0.29
VARS-216ENST00000428445 LMX1AQ8TE12 382 aa16.85■□□□□ 0.29
VARS-216ENST00000428445 VOPP1Q96AW1 172 aa16.85■□□□□ 0.29
VARS-216ENST00000428445 HIC2Q96JB3 615 aa16.85■□□□□ 0.29
VARS-216ENST00000428445 DEPDC7Q96QD5 511 aa16.85■□□□□ 0.29
VARS-216ENST00000428445 KLF6Q99612 283 aaPredicted RBP16.85■□□□□ 0.29
VARS-216ENST00000428445 ZYG11BQ9C0D3 744 aa16.85■□□□□ 0.29
VARS-216ENST00000428445 GPR27Q9NS67 375 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms