RNA–Protein interactions for RNA: ENST00000427191.6

PTPN13-203, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 8,487 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-203ENST00000427191 IDH2P48735 452 aaKnown RBP14.6□□□□□ -0.07
PTPN13-203ENST00000427191 ZNF844Q08AG5 666 aa14.6□□□□□ -0.07
PTPN13-203ENST00000427191 PYHIN1Q6K0P9 492 aa14.6□□□□□ -0.07
PTPN13-203ENST00000427191 TMPRSS11AQ6ZMR5 421 aa14.6□□□□□ -0.07
PTPN13-203ENST00000427191 NANOGNBQ7Z5D8 188 aa14.6□□□□□ -0.07
PTPN13-203ENST00000427191 POC5Q8NA72 575 aa14.6□□□□□ -0.07
PTPN13-203ENST00000427191 ZNF540Q8NDQ6 660 aa14.6□□□□□ -0.07
PTPN13-203ENST00000427191 RXFP2Q8WXD0 754 aa14.6□□□□□ -0.07
PTPN13-203ENST00000427191 ARL15Q9NXU5 204 aa14.6□□□□□ -0.07
PTPN13-203ENST00000427191 MORF4L1Q9UBU8 362 aa14.6□□□□□ -0.07
PTPN13-203ENST00000427191 CDC40O60508 579 aaKnown RBP eCLIP14.6□□□□□ -0.07
PTPN13-203ENST00000427191 ANXA5P08758 320 aa14.6□□□□□ -0.07
PTPN13-203ENST00000427191 NR4A1P22736 598 aa14.6□□□□□ -0.07
PTPN13-203ENST00000427191 ATN1P54259 1190 aaPredicted RBP14.6□□□□□ -0.07
PTPN13-203ENST00000427191 DNERQ8NFT8 737 aa14.6□□□□□ -0.07
PTPN13-203ENST00000427191 CORO1CQ9ULV4 474 aaPredicted RBP14.6□□□□□ -0.07
PTPN13-203ENST00000427191 PCDH8O95206 1070 aa14.6□□□□□ -0.07
PTPN13-203ENST00000427191 LTA4HP09960 611 aaKnown RBP14.6□□□□□ -0.07
PTPN13-203ENST00000427191 CCR3P51677 355 aa14.6□□□□□ -0.07
PTPN13-203ENST00000427191 CCR4P51679 360 aa14.6□□□□□ -0.07
PTPN13-203ENST00000427191 MARCH10Q8NA82 808 aaPredicted RBP14.6□□□□□ -0.07
PTPN13-203ENST00000427191 FAM81AQ8TBF8 368 aa14.6□□□□□ -0.07
PTPN13-203ENST00000427191 RGSL1A5PLK6 1076 aa14.6□□□□□ -0.07
PTPN13-203ENST00000427191 FAM196BA6NMK8 535 aa14.6□□□□□ -0.07
PTPN13-203ENST00000427191 XYLBO75191 536 aa14.6□□□□□ -0.07
PTPN13-203ENST00000427191 SERPINA6P08185 405 aa14.6□□□□□ -0.07
PTPN13-203ENST00000427191 EIF2S3P41091 472 aaKnown RBP14.6□□□□□ -0.07
PTPN13-203ENST00000427191 PIWIL4Q7Z3Z4 852 aaKnown RBP14.6□□□□□ -0.07
PTPN13-203ENST00000427191 WDR27A2RRH5 827 aa14.59□□□□□ -0.07
PTPN13-203ENST00000427191 MSH4O15457 936 aa14.59□□□□□ -0.07
PTPN13-203ENST00000427191 THPOP40225 353 aa14.59□□□□□ -0.07
PTPN13-203ENST00000427191 ERVK-24P63145 666 aa14.59□□□□□ -0.07
PTPN13-203ENST00000427191 OLFML1Q6UWY5 402 aa14.59□□□□□ -0.07
PTPN13-203ENST00000427191 TMC7Q7Z402 723 aa14.59□□□□□ -0.07
PTPN13-203ENST00000427191 VPS35Q96QK1 796 aa14.59□□□□□ -0.07
PTPN13-203ENST00000427191 PCDHA11Q9Y5I1 949 aa14.59□□□□□ -0.07
PTPN13-203ENST00000427191 CPS1P31327 1500 aa14.59□□□□□ -0.07
PTPN13-203ENST00000427191 CCNDBP1O95273 360 aa14.59□□□□□ -0.07
PTPN13-203ENST00000427191 PTPN1P18031 435 aaKnown RBP14.59□□□□□ -0.07
PTPN13-203ENST00000427191 CLCN5P51795 746 aa14.59□□□□□ -0.07
PTPN13-203ENST00000427191 TKTL1P51854 596 aa14.59□□□□□ -0.07
PTPN13-203ENST00000427191 CBFBQ13951 182 aa14.59□□□□□ -0.07
PTPN13-203ENST00000427191 GMCL1P1Q8NEA9 526 aa14.59□□□□□ -0.07
PTPN13-203ENST00000427191 HEXDCQ8WVB3 486 aa14.59□□□□□ -0.07
PTPN13-203ENST00000427191 ELP3Q9H9T3 547 aa14.59□□□□□ -0.07
PTPN13-203ENST00000427191 SLC12A8A0AV02 714 aa14.59□□□□□ -0.07
PTPN13-203ENST00000427191 HMGCRP04035 888 aa14.59□□□□□ -0.07
PTPN13-203ENST00000427191 VIL1P09327 827 aaKnown RBP14.59□□□□□ -0.07
PTPN13-203ENST00000427191 CRATP43155 626 aa14.59□□□□□ -0.07
PTPN13-203ENST00000427191 MAPKAPK3Q16644 382 aa14.59□□□□□ -0.07
PTPN13-203ENST00000427191 DDI2Q5TDH0 399 aa14.59□□□□□ -0.07
PTPN13-203ENST00000427191 MCOLN2Q8IZK6 566 aa14.59□□□□□ -0.07
PTPN13-203ENST00000427191 PLEKHG4BQ96PX9 1271 aa14.59□□□□□ -0.07
PTPN13-203ENST00000427191 EFR3BQ9Y2G0 817 aa14.59□□□□□ -0.07
PTPN13-203ENST00000427191 PROCP04070 461 aa14.59□□□□□ -0.07
PTPN13-203ENST00000427191 DGCR6Q14129 220 aa14.59□□□□□ -0.07
PTPN13-203ENST00000427191 TMEM86AQ8N2M4 240 aa14.59□□□□□ -0.07
PTPN13-203ENST00000427191 MAGEE2Q8TD90 523 aaPredicted RBP14.59□□□□□ -0.07
PTPN13-203ENST00000427191 PIF1Q9H611 641 aa14.59□□□□□ -0.07
PTPN13-203ENST00000427191 ASB7Q9H672 318 aa14.59□□□□□ -0.07
PTPN13-203ENST00000427191 GDF3Q9NR23 364 aa14.59□□□□□ -0.07
PTPN13-203ENST00000427191 CYP27B1O15528 508 aa14.59□□□□□ -0.07
PTPN13-203ENST00000427191 UNC5CO95185 931 aa14.59□□□□□ -0.07
PTPN13-203ENST00000427191 BMT2Q1RMZ1 405 aa14.59□□□□□ -0.07
PTPN13-203ENST00000427191 ARMC12Q5T9G4 340 aa14.59□□□□□ -0.07
PTPN13-203ENST00000427191 PTCD2Q8WV60 388 aaKnown RBP14.59□□□□□ -0.07
PTPN13-203ENST00000427191 MMP13P45452 471 aa14.59□□□□□ -0.07
PTPN13-203ENST00000427191 EIF5AP63241 154 aaKnown RBP14.59□□□□□ -0.07
PTPN13-203ENST00000427191 SLC20A2Q08357 652 aa14.59□□□□□ -0.07
PTPN13-203ENST00000427191 ACOX1Q15067 660 aa14.59□□□□□ -0.07
PTPN13-203ENST00000427191 PDK3Q15120 406 aa14.59□□□□□ -0.07
PTPN13-203ENST00000427191 ADAMTSL2Q86TH1 951 aa14.59□□□□□ -0.07
PTPN13-203ENST00000427191 AENQ8WTP8 325 aaKnown RBP14.59□□□□□ -0.07
PTPN13-203ENST00000427191 ITCHQ96J02 903 aa14.59□□□□□ -0.07
PTPN13-203ENST00000427191 RUSC1Q9BVN2 902 aa14.59□□□□□ -0.07
PTPN13-203ENST00000427191 MOV10Q9HCE1 1003 aaKnown RBP14.59□□□□□ -0.07
PTPN13-203ENST00000427191 MAGEL2Q9UJ55 1249 aa14.59□□□□□ -0.07
PTPN13-203ENST00000427191 BCL2L1Q07817 233 aa14.59□□□□□ -0.07
PTPN13-203ENST00000427191 RALGDSQ12967 914 aa14.59□□□□□ -0.07
PTPN13-203ENST00000427191 ZNF410Q86VK4 478 aa14.59□□□□□ -0.07
PTPN13-203ENST00000427191 COLGALT2Q8IYK4 626 aa14.59□□□□□ -0.07
PTPN13-203ENST00000427191 MSL3Q8N5Y2 521 aaKnown RBP14.59□□□□□ -0.07
PTPN13-203ENST00000427191 GSDMCQ9BYG8 508 aa14.59□□□□□ -0.07
PTPN13-203ENST00000427191 LMAN2LQ9H0V9 348 aa14.59□□□□□ -0.07
PTPN13-203ENST00000427191 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP14.59□□□□□ -0.07
PTPN13-203ENST00000427191 SAMD4AQ9UPU9 718 aaKnown RBP14.59□□□□□ -0.07
PTPN13-203ENST00000427191 KAT5Q92993 513 aa14.58□□□□□ -0.07
PTPN13-203ENST00000427191 BAIAP2Q9UQB8 552 aa14.58□□□□□ -0.07
PTPN13-203ENST00000427191 ROBO2Q9HCK4 1378 aa14.58□□□□□ -0.07
PTPN13-203ENST00000427191 OR14I1A6ND48 311 aa14.58□□□□□ -0.08
PTPN13-203ENST00000427191 ARHGEF33A8MVX0 844 aa14.58□□□□□ -0.08
PTPN13-203ENST00000427191 UPP2O95045 317 aa14.58□□□□□ -0.08
PTPN13-203ENST00000427191 THRBP10828 461 aa14.58□□□□□ -0.08
PTPN13-203ENST00000427191 EIF4BP23588 611 aaKnown RBP14.58□□□□□ -0.08
PTPN13-203ENST00000427191 TMEM62Q0P6H9 643 aa14.58□□□□□ -0.08
PTPN13-203ENST00000427191 TTI2Q6NXR4 508 aa14.58□□□□□ -0.08
PTPN13-203ENST00000427191 SLC47A2Q86VL8 602 aa14.58□□□□□ -0.08
PTPN13-203ENST00000427191 LPCAT1Q8NF37 534 aa14.58□□□□□ -0.08
PTPN13-203ENST00000427191 TRPS1Q9UHF7 1281 aa14.58□□□□□ -0.08
PTPN13-203ENST00000427191 PCDHB5Q9Y5E4 795 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms