RNA–Protein interactions for RNA: ENST00000425660.5

ACTB-204, Transcript of actin beta, humanhuman

TSL 1 (best)

Gene ACTB, Length 1,845 nt, Biotype nonsense mediated decay, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-204ENST00000425660 TRABDQ9H4I3 376 aa15.43■□□□□ 0.06
ACTB-204ENST00000425660 ZDHHC7Q9NXF8 308 aa15.43■□□□□ 0.06
ACTB-204ENST00000425660 DPP7Q9UHL4 492 aa15.43■□□□□ 0.06
ACTB-204ENST00000425660 SOX13Q9UN79 622 aa15.43■□□□□ 0.06
ACTB-204ENST00000425660 FAM169AQ9Y6X4 670 aa15.43■□□□□ 0.06
ACTB-204ENST00000425660 TRANK1O15050 2925 aa15.43■□□□□ 0.06
ACTB-204ENST00000425660 TYW5A2RUC4 315 aaKnown RBP15.43■□□□□ 0.06
ACTB-204ENST00000425660 GJA1P17302 382 aa15.43■□□□□ 0.06
ACTB-204ENST00000425660 MAGEA10P43363 369 aaPredicted RBP15.43■□□□□ 0.06
ACTB-204ENST00000425660 WNT3AP56704 352 aa15.43■□□□□ 0.06
ACTB-204ENST00000425660 MAXP61244 160 aa15.43■□□□□ 0.06
ACTB-204ENST00000425660 MPP2Q14168 576 aa15.43■□□□□ 0.06
ACTB-204ENST00000425660 IHHQ14623 411 aa15.43■□□□□ 0.06
ACTB-204ENST00000425660 POTEHQ6S545 545 aa15.43■□□□□ 0.06
ACTB-204ENST00000425660 CTAGE3PQ8IX95 158 aa15.43■□□□□ 0.06
ACTB-204ENST00000425660 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP15.43■□□□□ 0.06
ACTB-204ENST00000425660 PTCD2Q8WV60 388 aaKnown RBP15.43■□□□□ 0.06
ACTB-204ENST00000425660 CDKL2Q92772 493 aa15.43■□□□□ 0.06
ACTB-204ENST00000425660 TMA16Q96EY4 203 aaKnown RBP15.43■□□□□ 0.06
ACTB-204ENST00000425660 FCRL3Q96P31 734 aaPredicted RBP15.43■□□□□ 0.06
ACTB-204ENST00000425660 SMC6Q96SB8 1091 aa15.43■□□□□ 0.06
ACTB-204ENST00000425660 MGME1Q9BQP7 344 aa15.43■□□□□ 0.06
ACTB-204ENST00000425660 FICDQ9BVA6 458 aa15.43■□□□□ 0.06
ACTB-204ENST00000425660 CCDC134Q9H6E4 229 aa15.43■□□□□ 0.06
ACTB-204ENST00000425660 INTS9Q9NV88 658 aaKnown RBP15.43■□□□□ 0.06
ACTB-204ENST00000425660 HAUS2Q9NVX0 235 aa15.43■□□□□ 0.06
ACTB-204ENST00000425660 CFAP97Q9P2B7 532 aa15.43■□□□□ 0.06
ACTB-204ENST00000425660 SMG5Q9UPR3 1016 aaKnown RBP15.43■□□□□ 0.06
ACTB-204ENST00000425660 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15.42■□□□□ 0.06
ACTB-204ENST00000425660 A0A1W2PPM1 405 aa15.42■□□□□ 0.06
ACTB-204ENST00000425660 MUSKO15146 869 aa15.42■□□□□ 0.06
ACTB-204ENST00000425660 TYROBPO43914 113 aa15.42■□□□□ 0.06
ACTB-204ENST00000425660 TBL1XO60907 577 aa15.42■□□□□ 0.06
ACTB-204ENST00000425660 XYLBO75191 536 aa15.42■□□□□ 0.06
ACTB-204ENST00000425660 PMPCBO75439 489 aa15.42■□□□□ 0.06
ACTB-204ENST00000425660 LUC7L3O95232 432 aaKnown RBP15.42■□□□□ 0.06
ACTB-204ENST00000425660 PAPLNO95428 1278 aa15.42■□□□□ 0.06
ACTB-204ENST00000425660 RHOP08100 348 aa15.42■□□□□ 0.06
ACTB-204ENST00000425660 OXCT1P55809 520 aa15.42■□□□□ 0.06
ACTB-204ENST00000425660 DSC2Q02487 901 aa15.42■□□□□ 0.06
ACTB-204ENST00000425660 SLC14A2Q15849 920 aa15.42■□□□□ 0.06
ACTB-204ENST00000425660 ANKRD20A4Q4UJ75 823 aa15.42■□□□□ 0.06
ACTB-204ENST00000425660 PCID2Q5JVF3 399 aa15.42■□□□□ 0.06
ACTB-204ENST00000425660 UNC5BQ8IZJ1 945 aa15.42■□□□□ 0.06
ACTB-204ENST00000425660 CMTM8Q8IZV2 173 aa15.42■□□□□ 0.06
ACTB-204ENST00000425660 SERBP1Q8NC51 408 aaKnown RBP eCLIP15.42■□□□□ 0.065e-7■■■□□ 15.5
ACTB-204ENST00000425660 CERS2Q96G23 380 aa15.42■□□□□ 0.06
ACTB-204ENST00000425660 KIF9Q9HAQ2 790 aa15.42■□□□□ 0.06
ACTB-204ENST00000425660 UBA2Q9UBT2 640 aaPredicted RBP15.42■□□□□ 0.06
ACTB-204ENST00000425660 SEPT3Q9UH03 358 aa15.42■□□□□ 0.06
ACTB-204ENST00000425660 SH3BP1Q9Y3L3 701 aa15.42■□□□□ 0.06
ACTB-204ENST00000425660 OR51B4Q9Y5P0 310 aa15.42■□□□□ 0.06
ACTB-204ENST00000425660 HCFC2Q9Y5Z7 792 aa15.42■□□□□ 0.06
ACTB-204ENST00000425660 LOC285095A0A1B0GVY8 99 aa15.41■□□□□ 0.06
ACTB-204ENST00000425660 E2F8A0AVK6 867 aa15.41■□□□□ 0.06
ACTB-204ENST00000425660 FAM47DPA6NHR8 397 aa15.41■□□□□ 0.06
ACTB-204ENST00000425660 LEFTY2O00292 366 aa15.41■□□□□ 0.06
ACTB-204ENST00000425660 ATP9BO43861 1147 aa15.41■□□□□ 0.06
ACTB-204ENST00000425660 KRT37O76014 449 aa15.41■□□□□ 0.06
ACTB-204ENST00000425660 TPH1P17752 444 aa15.41■□□□□ 0.06
ACTB-204ENST00000425660 KRT4P19013 534 aa15.41■□□□□ 0.06
ACTB-204ENST00000425660 CNTFP26441 200 aa15.41■□□□□ 0.06
ACTB-204ENST00000425660 CD86P42081 329 aa15.41■□□□□ 0.06
ACTB-204ENST00000425660 MGAT5Q09328 741 aa15.41■□□□□ 0.06
ACTB-204ENST00000425660 GPM6BQ13491 265 aa15.41■□□□□ 0.06
ACTB-204ENST00000425660 ZNF235Q14590 738 aa15.41■□□□□ 0.06
ACTB-204ENST00000425660 FSCBQ5H9T9 825 aa15.41■□□□□ 0.06
ACTB-204ENST00000425660 PRSS36Q5K4E3 855 aa15.41■□□□□ 0.06
ACTB-204ENST00000425660 LGSNQ5TDP6 509 aa15.41■□□□□ 0.06
ACTB-204ENST00000425660 SH2D5Q6ZV89 423 aa15.41■□□□□ 0.06
ACTB-204ENST00000425660 BBS7Q8IWZ6 715 aa15.41■□□□□ 0.06
ACTB-204ENST00000425660 BBS5Q8N3I7 341 aa15.41■□□□□ 0.06
ACTB-204ENST00000425660 ALKBH8Q96BT7 664 aaKnown RBP15.41■□□□□ 0.06
ACTB-204ENST00000425660 MTBPQ96DY7 904 aa15.41■□□□□ 0.06
ACTB-204ENST00000425660 TCEAL4Q96EI5 215 aa15.41■□□□□ 0.06
ACTB-204ENST00000425660 MFSD3Q96ES6 412 aa15.41■□□□□ 0.06
ACTB-204ENST00000425660 EPN3Q9H201 632 aa15.41■□□□□ 0.06
ACTB-204ENST00000425660 TASP1Q9H6P5 420 aa15.41■□□□□ 0.06
ACTB-204ENST00000425660 MRM3Q9HC36 420 aaKnown RBP15.41■□□□□ 0.06
ACTB-204ENST00000425660 CHRAC1Q9NRG0 131 aa15.41■□□□□ 0.06
ACTB-204ENST00000425660 PRKAG3Q9UGI9 489 aa15.41■□□□□ 0.06
ACTB-204ENST00000425660 ZMYM5Q9UJ78 669 aa15.41■□□□□ 0.06
ACTB-204ENST00000425660 YBX2Q9Y2T7 364 aaKnown RBP15.41■□□□□ 0.06
ACTB-204ENST00000425660 SCAMP3O14828 347 aaKnown RBP15.4■□□□□ 0.06
ACTB-204ENST00000425660 ZMPSTE24O75844 475 aa15.4■□□□□ 0.06
ACTB-204ENST00000425660 KRT38O76015 456 aa15.4■□□□□ 0.06
ACTB-204ENST00000425660 EPOP01588 193 aa15.4■□□□□ 0.06
ACTB-204ENST00000425660 SNRPAP09012 282 aaKnown RBP15.4■□□□□ 0.06
ACTB-204ENST00000425660 GLDCP23378 1020 aa15.4■□□□□ 0.06
ACTB-204ENST00000425660 SERPINB9P50453 376 aa15.4■□□□□ 0.06
ACTB-204ENST00000425660 ITKQ08881 620 aa15.4■□□□□ 0.06
ACTB-204ENST00000425660 MSLNQ13421 630 aaPredicted RBP15.4■□□□□ 0.06
ACTB-204ENST00000425660 SLC5A9Q2M3M2 681 aa15.4■□□□□ 0.06
ACTB-204ENST00000425660 GPR158Q5T848 1215 aa15.4■□□□□ 0.06
ACTB-204ENST00000425660 RNF219Q5W0B1 726 aaPredicted RBP15.4■□□□□ 0.06
ACTB-204ENST00000425660 PKN3Q6P5Z2 889 aa15.4■□□□□ 0.06
ACTB-204ENST00000425660 TDRD5Q8NAT2 981 aaKnown RBP15.4■□□□□ 0.06
ACTB-204ENST00000425660 DENND1AQ8TEH3 1009 aa15.4■□□□□ 0.06
ACTB-204ENST00000425660 ZNF669Q96BR6 464 aaPredicted RBP15.4■□□□□ 0.06
ACTB-204ENST00000425660 ALG14Q96F25 216 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms