RNA–Protein interactions for RNA: ENST00000424143.5

C9orf3-204, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 1,605 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-204ENST00000424143 PCID2Q5JVF3 399 aa15.43■□□□□ 0.06
C9orf3-204ENST00000424143 BSPRYQ5W0U4 402 aa15.43■□□□□ 0.06
C9orf3-204ENST00000424143 C8orf82Q6P1X6 216 aaPredicted RBP15.43■□□□□ 0.06
C9orf3-204ENST00000424143 DNAAF3Q8N9W5 541 aa15.43■□□□□ 0.06
C9orf3-204ENST00000424143 TSPAN14Q8NG11 270 aa15.43■□□□□ 0.06
C9orf3-204ENST00000424143 GAB3Q8WWW8 586 aa15.43■□□□□ 0.06
C9orf3-204ENST00000424143 ZMAT2Q96NC0 199 aaKnown RBP15.43■□□□□ 0.06
C9orf3-204ENST00000424143 KLHL32Q96NJ5 620 aa15.43■□□□□ 0.06
C9orf3-204ENST00000424143 PRPF18Q99633 342 aaKnown RBP15.43■□□□□ 0.06
C9orf3-204ENST00000424143 MRPL46Q9H2W6 279 aaKnown RBP15.43■□□□□ 0.06
C9orf3-204ENST00000424143 MROH8Q9H579 483 aa15.43■□□□□ 0.06
C9orf3-204ENST00000424143 GALNT8Q9NY28 637 aa15.43■□□□□ 0.06
C9orf3-204ENST00000424143 NCKIPSDQ9NZQ3 722 aa15.43■□□□□ 0.06
C9orf3-204ENST00000424143 SEPT10Q9P0V9 454 aa15.43■□□□□ 0.06
C9orf3-204ENST00000424143 CD300AQ9UGN4 299 aa15.43■□□□□ 0.06
C9orf3-204ENST00000424143 RSL24D1Q9UHA3 163 aaKnown RBP15.43■□□□□ 0.06
C9orf3-204ENST00000424143 RUVBL2Q9Y230 463 aaKnown RBP15.43■□□□□ 0.06
C9orf3-204ENST00000424143 PCDHGA7Q9Y5G6 932 aa15.43■□□□□ 0.06
C9orf3-204ENST00000424143 TRIM64A6NGJ6 449 aa15.43■□□□□ 0.06
C9orf3-204ENST00000424143 BMP2P12643 396 aa15.43■□□□□ 0.06
C9orf3-204ENST00000424143 ENO3P13929 434 aaPredicted RBP15.43■□□□□ 0.06
C9orf3-204ENST00000424143 ERCC2P18074 760 aa15.43■□□□□ 0.06
C9orf3-204ENST00000424143 ATP5F1P24539 256 aaPredicted RBP15.43■□□□□ 0.06
C9orf3-204ENST00000424143 SLC5A2P31639 672 aa15.43■□□□□ 0.06
C9orf3-204ENST00000424143 ACADVLP49748 655 aa15.43■□□□□ 0.06
C9orf3-204ENST00000424143 NAGLUP54802 743 aa15.43■□□□□ 0.06
C9orf3-204ENST00000424143 RAB10P61026 200 aa15.43■□□□□ 0.06
C9orf3-204ENST00000424143 USP46P62068 366 aa15.43■□□□□ 0.06
C9orf3-204ENST00000424143 COG7P83436 770 aa15.43■□□□□ 0.06
C9orf3-204ENST00000424143 LRP8Q14114 963 aa15.43■□□□□ 0.06
C9orf3-204ENST00000424143 USP10Q14694 798 aaKnown RBP15.43■□□□□ 0.06
C9orf3-204ENST00000424143 PPP2R5DQ14738 602 aa15.43■□□□□ 0.06
C9orf3-204ENST00000424143 DLG2Q15700 870 aa15.43■□□□□ 0.06
C9orf3-204ENST00000424143 KCTD21Q4G0X4 260 aa15.43■□□□□ 0.06
C9orf3-204ENST00000424143 DALRD3Q5D0E6 543 aaKnown RBP15.43■□□□□ 0.06
C9orf3-204ENST00000424143 FBXO47Q5MNV8 452 aa15.43■□□□□ 0.06
C9orf3-204ENST00000424143 PPP4R4Q6NUP7 873 aa15.43■□□□□ 0.06
C9orf3-204ENST00000424143 PKN3Q6P5Z2 889 aa15.43■□□□□ 0.06
C9orf3-204ENST00000424143 SLC27A1Q6PCB7 646 aa15.43■□□□□ 0.06
C9orf3-204ENST00000424143 EEPD1Q7L9B9 569 aa15.43■□□□□ 0.06
C9orf3-204ENST00000424143 PIGZQ86VD9 579 aa15.43■□□□□ 0.06
C9orf3-204ENST00000424143 RBM12BQ8IXT5 1001 aaKnown RBP15.43■□□□□ 0.06
C9orf3-204ENST00000424143 CENPLQ8N0S6 344 aaPredicted RBP15.43■□□□□ 0.06
C9orf3-204ENST00000424143 TOP6BLQ8N6T0 577 aa15.43■□□□□ 0.06
C9orf3-204ENST00000424143 CNKSR2Q8WXI2 1034 aa15.43■□□□□ 0.06
C9orf3-204ENST00000424143 ZUFSPQ96AP4 578 aa15.43■□□□□ 0.06
C9orf3-204ENST00000424143 MFSD3Q96ES6 412 aa15.43■□□□□ 0.06
C9orf3-204ENST00000424143 ANKRD60Q9BZ19 345 aa15.43■□□□□ 0.06
C9orf3-204ENST00000424143 NUF2Q9BZD4 464 aa15.43■□□□□ 0.06
C9orf3-204ENST00000424143 GRIP2Q9C0E4 1043 aa15.43■□□□□ 0.06
C9orf3-204ENST00000424143 DPEP3Q9H4B8 488 aa15.43■□□□□ 0.06
C9orf3-204ENST00000424143 MEAF6Q9HAF1 191 aa15.43■□□□□ 0.06
C9orf3-204ENST00000424143 IARS2Q9NSE4 1012 aaKnown RBP15.43■□□□□ 0.06
C9orf3-204ENST00000424143 TBCCD1Q9NVR7 557 aa15.43■□□□□ 0.06
C9orf3-204ENST00000424143 ARMC1Q9NVT9 282 aa15.43■□□□□ 0.06
C9orf3-204ENST00000424143 SLC39A10Q9ULF5 831 aa15.43■□□□□ 0.06
C9orf3-204ENST00000424143 SLC8A2Q9UPR5 921 aa15.43■□□□□ 0.06
C9orf3-204ENST00000424143 MYRFQ9Y2G1 1151 aa15.43■□□□□ 0.06
C9orf3-204ENST00000424143 RNF11Q9Y3C5 154 aa15.43■□□□□ 0.06
C9orf3-204ENST00000424143 A0A0G2JLL6 359 aaPredicted RBP15.42■□□□□ 0.06
C9orf3-204ENST00000424143 CXCL11O14625 94 aa15.42■□□□□ 0.06
C9orf3-204ENST00000424143 PPEF2O14830 753 aa15.42■□□□□ 0.06
C9orf3-204ENST00000424143 ZBTB24O43167 697 aaPredicted RBP15.42■□□□□ 0.06
C9orf3-204ENST00000424143 F9P00740 461 aa15.42■□□□□ 0.06
C9orf3-204ENST00000424143 KCNE1P15382 129 aa15.42■□□□□ 0.06
C9orf3-204ENST00000424143 ADORA2BP29275 332 aa15.42■□□□□ 0.06
C9orf3-204ENST00000424143 AXLP30530 894 aa15.42■□□□□ 0.06
C9orf3-204ENST00000424143 RANBP1P43487 201 aa15.42■□□□□ 0.06
C9orf3-204ENST00000424143 EMP3P54852 163 aa15.42■□□□□ 0.06
C9orf3-204ENST00000424143 ITGA7Q13683 1181 aa15.42■□□□□ 0.06
C9orf3-204ENST00000424143 KCTD2Q14681 263 aa15.42■□□□□ 0.06
C9orf3-204ENST00000424143 DCAF6Q58WW2 860 aa15.42■□□□□ 0.06
C9orf3-204ENST00000424143 SAMD4BQ5PRF9 694 aaKnown RBP15.42■□□□□ 0.06
C9orf3-204ENST00000424143 C6orf52Q5T4I8 152 aa15.42■□□□□ 0.06
C9orf3-204ENST00000424143 KIAA0408Q6ZU52 694 aa15.42■□□□□ 0.06
C9orf3-204ENST00000424143 ARMCX2Q7L311 632 aa15.42■□□□□ 0.06
C9orf3-204ENST00000424143 PRRT2Q7Z6L0 340 aaPredicted RBP15.42■□□□□ 0.06
C9orf3-204ENST00000424143 FSTL5Q8N475 847 aaPredicted RBP15.42■□□□□ 0.06
C9orf3-204ENST00000424143 MFSD2AQ8NA29 543 aa15.42■□□□□ 0.06
C9orf3-204ENST00000424143 SHCBP1Q8NEM2 672 aa15.42■□□□□ 0.06
C9orf3-204ENST00000424143 PPTC7Q8NI37 304 aa15.42■□□□□ 0.06
C9orf3-204ENST00000424143 ZSCAN18Q8TBC5 510 aaPredicted RBP15.42■□□□□ 0.06
C9orf3-204ENST00000424143 CAMKK2Q96RR4 588 aa15.42■□□□□ 0.06
C9orf3-204ENST00000424143 TRMOQ9BU70 441 aa15.42■□□□□ 0.06
C9orf3-204ENST00000424143 CAB39LQ9H9S4 337 aa15.42■□□□□ 0.06
C9orf3-204ENST00000424143 EML4Q9HC35 981 aaKnown RBP15.42■□□□□ 0.06
C9orf3-204ENST00000424143 PREBQ9HCU5 417 aa15.42■□□□□ 0.06
C9orf3-204ENST00000424143 CHCHD3Q9NX63 227 aaKnown RBP15.42■□□□□ 0.06
C9orf3-204ENST00000424143 FBXW11Q9UKB1 542 aa15.42■□□□□ 0.06
C9orf3-204ENST00000424143 AAR2Q9Y312 384 aaKnown RBP15.42■□□□□ 0.06
C9orf3-204ENST00000424143 ARHGEF37A1IGU5 675 aa15.41■□□□□ 0.06
C9orf3-204ENST00000424143 HEATR9A2RTY3 570 aa15.41■□□□□ 0.06
C9orf3-204ENST00000424143 M0QYT0 321 aa15.41■□□□□ 0.06
C9orf3-204ENST00000424143 TK2O00142 265 aa15.41■□□□□ 0.06
C9orf3-204ENST00000424143 NFKBIEO00221 500 aa15.41■□□□□ 0.06
C9orf3-204ENST00000424143 MYL3P08590 195 aa15.41■□□□□ 0.06
C9orf3-204ENST00000424143 IMPDH2P12268 514 aa15.41■□□□□ 0.06
C9orf3-204ENST00000424143 HOXD8P13378 290 aaPredicted RBP15.41■□□□□ 0.06
C9orf3-204ENST00000424143 HOXA11P31270 313 aaPredicted RBP15.41■□□□□ 0.06
C9orf3-204ENST00000424143 PKNOX1P55347 436 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms