RNA–Protein interactions for RNA: ENST00000422242.1

RAB5A-203, Transcript of RAB5A, member RAS oncogene family, humanhuman

TSL 2 BASIC

Gene RAB5A, Length 1,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5A-203ENST00000422242 GRAMD4Q6IC98 578 aa11.3□□□□□ -0.6
RAB5A-203ENST00000422242 UNC93AQ86WB7 457 aa11.3□□□□□ -0.6
RAB5A-203ENST00000422242 FAM71AQ8IYT1 594 aa11.3□□□□□ -0.6
RAB5A-203ENST00000422242 STPG3Q8N7X2 389 aa11.3□□□□□ -0.6
RAB5A-203ENST00000422242 CCDC112Q8NEF3 446 aa11.3□□□□□ -0.6
RAB5A-203ENST00000422242 APPL2Q8NEU8 664 aa11.3□□□□□ -0.6
RAB5A-203ENST00000422242 RAD9AQ99638 391 aa11.3□□□□□ -0.6
RAB5A-203ENST00000422242 GDF15Q99988 308 aa11.3□□□□□ -0.6
RAB5A-203ENST00000422242 DNAI2Q9GZS0 605 aa11.3□□□□□ -0.6
RAB5A-203ENST00000422242 CISHQ9NSE2 258 aa11.3□□□□□ -0.6
RAB5A-203ENST00000422242 ZNHIT6Q9NWK9 470 aaKnown RBP11.3□□□□□ -0.6
RAB5A-203ENST00000422242 DNAJB4Q9UDY4 337 aa11.3□□□□□ -0.6
RAB5A-203ENST00000422242 STK39Q9UEW8 545 aa11.3□□□□□ -0.6
RAB5A-203ENST00000422242 PADI4Q9UM07 663 aa11.3□□□□□ -0.6
RAB5A-203ENST00000422242 BZW2Q9Y6E2 419 aaKnown RBP11.3□□□□□ -0.6
RAB5A-203ENST00000422242 PLXNA4Q9HCM2 1894 aa11.29□□□□□ -0.6
RAB5A-203ENST00000422242 FOXN3O00409 490 aaPredicted RBP11.29□□□□□ -0.6
RAB5A-203ENST00000422242 HUS1O60921 280 aa11.29□□□□□ -0.6
RAB5A-203ENST00000422242 ODC1P11926 461 aa11.29□□□□□ -0.6
RAB5A-203ENST00000422242 TSHRP16473 764 aa11.29□□□□□ -0.6
RAB5A-203ENST00000422242 TYMPP19971 482 aa11.29□□□□□ -0.6
RAB5A-203ENST00000422242 SLC7A1P30825 629 aa11.29□□□□□ -0.6
RAB5A-203ENST00000422242 PRKCIP41743 596 aa11.29□□□□□ -0.6
RAB5A-203ENST00000422242 SLC11A1P49279 550 aa11.29□□□□□ -0.6
RAB5A-203ENST00000422242 ALDH7A1P49419 539 aaKnown RBP11.29□□□□□ -0.6
RAB5A-203ENST00000422242 ZNF132P52740 706 aa11.29□□□□□ -0.6
RAB5A-203ENST00000422242 MAPK10P53779 464 aa11.29□□□□□ -0.6
RAB5A-203ENST00000422242 BPIFB4P59827 614 aa11.29□□□□□ -0.6
RAB5A-203ENST00000422242 FMO1Q01740 532 aa11.29□□□□□ -0.6
RAB5A-203ENST00000422242 MEF2AQ02078 507 aaPredicted RBP11.29□□□□□ -0.6
RAB5A-203ENST00000422242 ELF2Q15723 593 aa11.29□□□□□ -0.6
RAB5A-203ENST00000422242 SOWAHAQ2M3V2 549 aa11.29□□□□□ -0.6
RAB5A-203ENST00000422242 LRRC8AQ8IWT6 810 aa11.29□□□□□ -0.6
RAB5A-203ENST00000422242 CCDC33Q8N5R6 958 aa11.29□□□□□ -0.6
RAB5A-203ENST00000422242 SENP8Q96LD8 212 aa11.29□□□□□ -0.6
RAB5A-203ENST00000422242 MMS19Q96T76 1030 aa11.29□□□□□ -0.6
RAB5A-203ENST00000422242 MANSC1Q9H8J5 431 aa11.29□□□□□ -0.6
RAB5A-203ENST00000422242 MARCH5Q9NX47 278 aa11.29□□□□□ -0.6
RAB5A-203ENST00000422242 CACNG4Q9UBN1 327 aa11.29□□□□□ -0.6
RAB5A-203ENST00000422242 ADAM28Q9UKQ2 775 aa11.29□□□□□ -0.6
RAB5A-203ENST00000422242 BARX2Q9UMQ3 279 aaPredicted RBP11.29□□□□□ -0.6
RAB5A-203ENST00000422242 PTPRDP23468 1912 aa11.29□□□□□ -0.6
RAB5A-203ENST00000422242 SF3B1O75533 1304 aaKnown RBP eCLIP11.29□□□□□ -0.6
RAB5A-203ENST00000422242 A0A087WV62 115 aa11.28□□□□□ -0.6
RAB5A-203ENST00000422242 CYB561D2O14569 222 aa11.28□□□□□ -0.6
RAB5A-203ENST00000422242 SYN3O14994 580 aa11.28□□□□□ -0.6
RAB5A-203ENST00000422242 TADA2AO75478 443 aa11.28□□□□□ -0.6
RAB5A-203ENST00000422242 PAPLNO95428 1278 aa11.28□□□□□ -0.6
RAB5A-203ENST00000422242 SERPING1P05155 500 aa11.28□□□□□ -0.6
RAB5A-203ENST00000422242 PTMAP06454 111 aaKnown RBP11.28□□□□□ -0.6
RAB5A-203ENST00000422242 PAEPP09466 180 aa11.28□□□□□ -0.6
RAB5A-203ENST00000422242 SPINK2P20155 84 aa11.28□□□□□ -0.6
RAB5A-203ENST00000422242 WARSP23381 471 aaKnown RBP11.28□□□□□ -0.6
RAB5A-203ENST00000422242 ANXA13P27216 316 aa11.28□□□□□ -0.6
RAB5A-203ENST00000422242 ECHS1P30084 290 aa11.28□□□□□ -0.6
RAB5A-203ENST00000422242 LHX1P48742 406 aa11.28□□□□□ -0.6
RAB5A-203ENST00000422242 CNGA2Q16280 664 aa11.28□□□□□ -0.6
RAB5A-203ENST00000422242 ASIC2Q16515 512 aa11.28□□□□□ -0.6
RAB5A-203ENST00000422242 C9orf50Q5SZB4 431 aa11.28□□□□□ -0.6
RAB5A-203ENST00000422242 HIBCHQ6NVY1 386 aaPredicted RBP11.28□□□□□ -0.6
RAB5A-203ENST00000422242 DSTYKQ6XUX3 929 aa11.28□□□□□ -0.6
RAB5A-203ENST00000422242 IRF2BP2Q7Z5L9 587 aa11.28□□□□□ -0.6
RAB5A-203ENST00000422242 TMCO2Q7Z6W1 182 aaPredicted RBP11.28□□□□□ -0.6
RAB5A-203ENST00000422242 CCHCR1Q8TD31 782 aa11.28□□□□□ -0.6
RAB5A-203ENST00000422242 ZNF558Q96NG5 402 aa11.28□□□□□ -0.6
RAB5A-203ENST00000422242 TMEM209Q96SK2 561 aa11.28□□□□□ -0.6
RAB5A-203ENST00000422242 SDCBP2Q9H190 292 aa11.28□□□□□ -0.6
RAB5A-203ENST00000422242 SMYD3Q9H7B4 428 aa11.28□□□□□ -0.6
RAB5A-203ENST00000422242 PNPLA8Q9NP80 782 aa11.28□□□□□ -0.6
RAB5A-203ENST00000422242 SAE1Q9UBE0 346 aaPredicted RBP11.28□□□□□ -0.6
RAB5A-203ENST00000422242 CEP290O15078 2479 aa11.28□□□□□ -0.6
RAB5A-203ENST00000422242 TNRC18O15417 2968 aaPredicted RBP11.28□□□□□ -0.6
RAB5A-203ENST00000422242 MYH10P35580 1976 aa11.28□□□□□ -0.6
RAB5A-203ENST00000422242 OR14I1A6ND48 311 aa11.27□□□□□ -0.6
RAB5A-203ENST00000422242 MYO1FO00160 1098 aa11.27□□□□□ -0.6
RAB5A-203ENST00000422242 ITGB1P05556 798 aa11.27□□□□□ -0.6
RAB5A-203ENST00000422242 LTA4HP09960 611 aaKnown RBP11.27□□□□□ -0.6
RAB5A-203ENST00000422242 WEE2P0C1S8 567 aa11.27□□□□□ -0.6
RAB5A-203ENST00000422242 LINC00271P0C7V0 271 aa11.27□□□□□ -0.6
RAB5A-203ENST00000422242 HNRNPLP14866 589 aaKnown RBP eCLIP11.27□□□□□ -0.6
RAB5A-203ENST00000422242 BRAFP15056 766 aa11.27□□□□□ -0.6
RAB5A-203ENST00000422242 SSTR4P31391 388 aa11.27□□□□□ -0.6
RAB5A-203ENST00000422242 GRK6P43250 576 aa11.27□□□□□ -0.6
RAB5A-203ENST00000422242 SHHQ15465 462 aa11.27□□□□□ -0.6
RAB5A-203ENST00000422242 HS1BP3Q53T59 392 aa11.27□□□□□ -0.6
RAB5A-203ENST00000422242 CCDC70Q6NSX1 233 aa11.27□□□□□ -0.6
RAB5A-203ENST00000422242 WDR59Q6PJI9 974 aa11.27□□□□□ -0.6
RAB5A-203ENST00000422242 TMEM270Q6UE05 265 aa11.27□□□□□ -0.6
RAB5A-203ENST00000422242 SCARA5Q6ZMJ2 495 aa11.27□□□□□ -0.6
RAB5A-203ENST00000422242 CXXC5Q7LFL8 322 aaKnown RBP11.27□□□□□ -0.6
RAB5A-203ENST00000422242 METTL23Q86XA0 190 aa11.27□□□□□ -0.6
RAB5A-203ENST00000422242 ZNF677Q86XU0 584 aa11.27□□□□□ -0.6
RAB5A-203ENST00000422242 TMTC1Q8IUR5 882 aa11.27□□□□□ -0.6
RAB5A-203ENST00000422242 RNF168Q8IYW5 571 aaPredicted RBP11.27□□□□□ -0.6
RAB5A-203ENST00000422242 ADGRF2Q8IZF7 708 aa11.27□□□□□ -0.6
RAB5A-203ENST00000422242 BCL6BQ8N143 479 aaPredicted RBP11.27□□□□□ -0.6
RAB5A-203ENST00000422242 SLC39A11Q8N1S5 342 aa11.27□□□□□ -0.6
RAB5A-203ENST00000422242 PDCL2Q8N4E4 241 aa11.27□□□□□ -0.6
RAB5A-203ENST00000422242 CELF5Q8N6W0 485 aaKnown RBP11.27□□□□□ -0.6
RAB5A-203ENST00000422242 ZSCAN18Q8TBC5 510 aaPredicted RBP11.27□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms