RNA–Protein interactions for RNA: ENST00000421712.1

BRAT1-202, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 3

Gene BRAT1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-202ENST00000421712 MFSD11O43934 449 aa16.02■□□□□ 0.16
BRAT1-202ENST00000421712 GFRA3O60609 400 aa16.02■□□□□ 0.16
BRAT1-202ENST00000421712 ZNF821O75541 412 aaPredicted RBP16.02■□□□□ 0.16
BRAT1-202ENST00000421712 MAP3K6O95382 1288 aa16.02■□□□□ 0.16
BRAT1-202ENST00000421712 IGSF6O95976 241 aa16.02■□□□□ 0.16
BRAT1-202ENST00000421712 ZFXP17010 805 aaPredicted RBP16.02■□□□□ 0.16
BRAT1-202ENST00000421712 PLA2G5P39877 138 aa16.02■□□□□ 0.16
BRAT1-202ENST00000421712 CCNHP51946 323 aaPredicted RBP16.02■□□□□ 0.16
BRAT1-202ENST00000421712 DYNLT1P63172 113 aa16.02■□□□□ 0.16
BRAT1-202ENST00000421712 RAD51Q06609 339 aa16.02■□□□□ 0.16
BRAT1-202ENST00000421712 PAFAH1B3Q15102 231 aaKnown RBP16.02■□□□□ 0.16
BRAT1-202ENST00000421712 CYTH1Q15438 398 aa16.02■□□□□ 0.16
BRAT1-202ENST00000421712 LAIR1Q6GTX8 287 aa16.02■□□□□ 0.16
BRAT1-202ENST00000421712 MFSD7Q6UXD7 560 aa16.02■□□□□ 0.16
BRAT1-202ENST00000421712 SPOCD1Q6ZMY3 1216 aa16.02■□□□□ 0.16
BRAT1-202ENST00000421712 ARMCX6Q7L4S7 300 aa16.02■□□□□ 0.16
BRAT1-202ENST00000421712 ASCL5Q7RTU5 278 aa16.02■□□□□ 0.16
BRAT1-202ENST00000421712 KATNAL2Q8IYT4 538 aa16.02■□□□□ 0.16
BRAT1-202ENST00000421712 PQLC3Q8N755 202 aa16.02■□□□□ 0.16
BRAT1-202ENST00000421712 OR2AP1Q8NGE2 309 aa16.02■□□□□ 0.16
BRAT1-202ENST00000421712 OR6K2Q8NGY2 324 aa16.02■□□□□ 0.16
BRAT1-202ENST00000421712 RBM41Q96IZ5 413 aaKnown RBP16.02■□□□□ 0.16
BRAT1-202ENST00000421712 ZC3H10Q96K80 434 aaKnown RBP16.02■□□□□ 0.16
BRAT1-202ENST00000421712 GDAP1L1Q96MZ0 367 aa16.02■□□□□ 0.16
BRAT1-202ENST00000421712 GPR174Q9BXC1 333 aa16.02■□□□□ 0.16
BRAT1-202ENST00000421712 BTBD1Q9H0C5 482 aa16.02■□□□□ 0.16
BRAT1-202ENST00000421712 PDFQ9HBH1 243 aa16.02■□□□□ 0.16
BRAT1-202ENST00000421712 WSB2Q9NYS7 404 aaPredicted RBP16.02■□□□□ 0.16
BRAT1-202ENST00000421712 SARDHQ9UL12 918 aa16.02■□□□□ 0.16
BRAT1-202ENST00000421712 PPM1HQ9ULR3 514 aa16.02■□□□□ 0.16
BRAT1-202ENST00000421712 PCDHA3Q9Y5H8 950 aa16.02■□□□□ 0.16
BRAT1-202ENST00000421712 HEY1Q9Y5J3 304 aa16.02■□□□□ 0.16
BRAT1-202ENST00000421712 SPAG17Q6Q759 2223 aa16.01■□□□□ 0.15
BRAT1-202ENST00000421712 PRR23AA6NEV1 266 aa16.01■□□□□ 0.15
BRAT1-202ENST00000421712 ZNF487B1APH4 448 aa16.01■□□□□ 0.15
BRAT1-202ENST00000421712 LEFTY1O75610 366 aa16.01■□□□□ 0.15
BRAT1-202ENST00000421712 POP4O95707 220 aaKnown RBP16.01■□□□□ 0.15
BRAT1-202ENST00000421712 FTCDO95954 541 aa16.01■□□□□ 0.15
BRAT1-202ENST00000421712 GSRP00390 522 aa16.01■□□□□ 0.15
BRAT1-202ENST00000421712 KRT10P13645 584 aa16.01■□□□□ 0.15
BRAT1-202ENST00000421712 MX2P20592 715 aa16.01■□□□□ 0.15
BRAT1-202ENST00000421712 CTNNA1P35221 906 aaKnown RBP16.01■□□□□ 0.15
BRAT1-202ENST00000421712 CETN2P41208 172 aa16.01■□□□□ 0.15
BRAT1-202ENST00000421712 MARCKSL1P49006 195 aa16.01■□□□□ 0.15
BRAT1-202ENST00000421712 RWDD2BP57060 319 aa16.01■□□□□ 0.15
BRAT1-202ENST00000421712 GBE1Q04446 702 aa16.01■□□□□ 0.15
BRAT1-202ENST00000421712 TFDP2Q14188 446 aa16.01■□□□□ 0.15
BRAT1-202ENST00000421712 RFTN1Q14699 578 aaPredicted RBP16.01■□□□□ 0.15
BRAT1-202ENST00000421712 MYLK3Q32MK0 819 aa16.01■□□□□ 0.15
BRAT1-202ENST00000421712 PMS2CLQ68D20 193 aa16.01■□□□□ 0.15
BRAT1-202ENST00000421712 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP16.01■□□□□ 0.15
BRAT1-202ENST00000421712 USP30Q70CQ3 517 aa16.01■□□□□ 0.15
BRAT1-202ENST00000421712 VSIG1Q86XK7 387 aa16.01■□□□□ 0.15
BRAT1-202ENST00000421712 LRRC49Q8IUZ0 686 aa16.01■□□□□ 0.15
BRAT1-202ENST00000421712 BBS5Q8N3I7 341 aa16.01■□□□□ 0.15
BRAT1-202ENST00000421712 UBL4BQ8N7F7 174 aa16.01■□□□□ 0.15
BRAT1-202ENST00000421712 LRRC57Q8N9N7 239 aa16.01■□□□□ 0.15
BRAT1-202ENST00000421712 CCNYQ8ND76 341 aa16.01■□□□□ 0.15
BRAT1-202ENST00000421712 TMIEQ8NEW7 156 aa16.01■□□□□ 0.15
BRAT1-202ENST00000421712 EXD1Q8NHP7 514 aa16.01■□□□□ 0.15
BRAT1-202ENST00000421712 EXOC2Q96KP1 924 aa16.01■□□□□ 0.15
BRAT1-202ENST00000421712 NEUROG2Q9H2A3 272 aa16.01■□□□□ 0.15
BRAT1-202ENST00000421712 EVLQ9UI08 416 aaPredicted RBP16.01■□□□□ 0.15
BRAT1-202ENST00000421712 NYNRINQ9P2P1 1898 aaKnown RBP16■□□□□ 0.15
BRAT1-202ENST00000421712 CCDC66A2RUB6 948 aa16■□□□□ 0.15
BRAT1-202ENST00000421712 PLK4O00444 970 aa16■□□□□ 0.15
BRAT1-202ENST00000421712 MAFKO60675 156 aa16■□□□□ 0.15
BRAT1-202ENST00000421712 NEBLO76041 1014 aa16■□□□□ 0.15
BRAT1-202ENST00000421712 CTSLP07711 333 aa16■□□□□ 0.15
BRAT1-202ENST00000421712 CTNNA2P26232 953 aa16■□□□□ 0.15
BRAT1-202ENST00000421712 GKP32189 559 aa16■□□□□ 0.15
BRAT1-202ENST00000421712 ACSL1P33121 698 aa16■□□□□ 0.15
BRAT1-202ENST00000421712 GARSP41250 739 aaKnown RBP16■□□□□ 0.15
BRAT1-202ENST00000421712 CDKN2BP42772 138 aa16■□□□□ 0.15
BRAT1-202ENST00000421712 METAP1P53582 386 aa16■□□□□ 0.15
BRAT1-202ENST00000421712 CREB5Q02930 508 aa16■□□□□ 0.15
BRAT1-202ENST00000421712 CCDC15Q0P6D6 951 aa16■□□□□ 0.15
BRAT1-202ENST00000421712 GALNT2Q10471 571 aa16■□□□□ 0.15
BRAT1-202ENST00000421712 ZNF235Q14590 738 aa16■□□□□ 0.15
BRAT1-202ENST00000421712 LBRQ14739 615 aaKnown RBP16■□□□□ 0.15
BRAT1-202ENST00000421712 TFDP3Q5H9I0 405 aa16■□□□□ 0.15
BRAT1-202ENST00000421712 TMCO4Q5TGY1 634 aa16■□□□□ 0.15
BRAT1-202ENST00000421712 CCDC181Q5TID7 509 aa16■□□□□ 0.15
BRAT1-202ENST00000421712 TIGD7Q6NT04 549 aaPredicted RBP16■□□□□ 0.15
BRAT1-202ENST00000421712 NT5DC3Q86UY8 548 aa16■□□□□ 0.15
BRAT1-202ENST00000421712 PLPP6Q8IY26 295 aa16■□□□□ 0.15
BRAT1-202ENST00000421712 RGL4Q8IZJ4 473 aa16■□□□□ 0.15
BRAT1-202ENST00000421712 AADATQ8N5Z0 425 aa16■□□□□ 0.15
BRAT1-202ENST00000421712 PAF1Q8N7H5 531 aa16■□□□□ 0.15
BRAT1-202ENST00000421712 OR14C36Q8NHC7 312 aa16■□□□□ 0.15
BRAT1-202ENST00000421712 PPP1R16AQ96I34 528 aa16■□□□□ 0.15
BRAT1-202ENST00000421712 LOXL4Q96JB6 756 aa16■□□□□ 0.15
BRAT1-202ENST00000421712 ZNF599Q96NL3 588 aa16■□□□□ 0.15
BRAT1-202ENST00000421712 SGK2Q9HBY8 427 aa16■□□□□ 0.15
BRAT1-202ENST00000421712 SERGEFQ9UGK8 458 aa16■□□□□ 0.15
BRAT1-202ENST00000421712 SEPT3Q9UH03 358 aa16■□□□□ 0.15
BRAT1-202ENST00000421712 PPP2R2CQ9Y2T4 447 aa16■□□□□ 0.15
BRAT1-202ENST00000421712 CAPN6Q9Y6Q1 641 aa16■□□□□ 0.15
BRAT1-202ENST00000421712 VPS13AQ96RL7 3174 aa15.99■□□□□ 0.15
BRAT1-202ENST00000421712 SHROOM3Q8TF72 1996 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms