RNA–Protein interactions for RNA: ENST00000421670.3

DDX55-203, Transcript of DEAD-box helicase 55, humanhuman

TSL 1 (best) BASIC

Gene DDX55, Length 1,574 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-203ENST00000421670 ALADP13716 330 aa15.96■□□□□ 0.15
DDX55-203ENST00000421670 NTSR1P30989 418 aa15.96■□□□□ 0.15
DDX55-203ENST00000421670 COILP38432 576 aaPredicted RBP15.96■□□□□ 0.15
DDX55-203ENST00000421670 MRPS21P82921 87 aaKnown RBP15.96■□□□□ 0.15
DDX55-203ENST00000421670 TUBB2AQ13885 445 aa15.96■□□□□ 0.15
DDX55-203ENST00000421670 ATXN7L2Q5T6C5 722 aaPredicted RBP15.96■□□□□ 0.15
DDX55-203ENST00000421670 PRUNE1Q86TP1 453 aa15.96■□□□□ 0.15
DDX55-203ENST00000421670 ZNF567Q8N184 647 aa15.96■□□□□ 0.15
DDX55-203ENST00000421670 CNTD1Q8N815 330 aa15.96■□□□□ 0.15
DDX55-203ENST00000421670 KDM1BQ8NB78 822 aa15.96■□□□□ 0.15
DDX55-203ENST00000421670 GLIS1Q8NBF1 620 aa15.96■□□□□ 0.15
DDX55-203ENST00000421670 OR6K2Q8NGY2 324 aa15.96■□□□□ 0.15
DDX55-203ENST00000421670 CASKIN2Q8WXE0 1202 aa15.96■□□□□ 0.15
DDX55-203ENST00000421670 PSKH2Q96QS6 385 aa15.96■□□□□ 0.15
DDX55-203ENST00000421670 NELL2Q99435 816 aa15.96■□□□□ 0.15
DDX55-203ENST00000421670 TUBB2BQ9BVA1 445 aa15.96■□□□□ 0.15
DDX55-203ENST00000421670 POLR3BQ9NW08 1133 aaPredicted RBP15.96■□□□□ 0.15
DDX55-203ENST00000421670 SEPT3Q9UH03 358 aa15.96■□□□□ 0.15
DDX55-203ENST00000421670 ZDBF2Q9HCK1 2354 aa15.96■□□□□ 0.15
DDX55-203ENST00000421670 TTC24A2A3L6 582 aaPredicted RBP15.96■□□□□ 0.14
DDX55-203ENST00000421670 CFAP69A5D8W1 941 aa15.96■□□□□ 0.14
DDX55-203ENST00000421670 F5H423 210 aaPredicted RBP15.96■□□□□ 0.14
DDX55-203ENST00000421670 MTSS1O43312 755 aa15.96■□□□□ 0.14
DDX55-203ENST00000421670 IFNB1P01574 187 aa15.96■□□□□ 0.14
DDX55-203ENST00000421670 DCNP07585 359 aaKnown RBP15.96■□□□□ 0.14
DDX55-203ENST00000421670 ETS1P14921 441 aa15.96■□□□□ 0.14
DDX55-203ENST00000421670 CHRNA3P32297 505 aa15.96■□□□□ 0.14
DDX55-203ENST00000421670 FNTAP49354 379 aa15.96■□□□□ 0.14
DDX55-203ENST00000421670 VASPP50552 380 aaPredicted RBP15.96■□□□□ 0.14
DDX55-203ENST00000421670 ENPP2Q13822 863 aa15.96■□□□□ 0.14
DDX55-203ENST00000421670 GAS6Q14393 721 aa15.96■□□□□ 0.14
DDX55-203ENST00000421670 HNRNPA1L2Q32P51 320 aaKnown RBP15.96■□□□□ 0.14
DDX55-203ENST00000421670 GSTA5Q7RTV2 222 aa15.96■□□□□ 0.14
DDX55-203ENST00000421670 ZNF572Q7Z3I7 529 aaPredicted RBP15.96■□□□□ 0.14
DDX55-203ENST00000421670 METTL3Q86U44 580 aaKnown RBP15.96■□□□□ 0.14
DDX55-203ENST00000421670 CCDC110Q8TBZ0 833 aa15.96■□□□□ 0.14
DDX55-203ENST00000421670 KCNV2Q8TDN2 545 aa15.96■□□□□ 0.14
DDX55-203ENST00000421670 PTPRN2Q92932 1015 aa15.96■□□□□ 0.14
DDX55-203ENST00000421670 FERMT1Q9BQL6 677 aa15.96■□□□□ 0.14
DDX55-203ENST00000421670 CEP44Q9C0F1 390 aa15.96■□□□□ 0.14
DDX55-203ENST00000421670 KLHL8Q9P2G9 620 aaPredicted RBP15.96■□□□□ 0.14
DDX55-203ENST00000421670 SLC8A2Q9UPR5 921 aa15.96■□□□□ 0.14
DDX55-203ENST00000421670 SIT1Q9Y3P8 196 aa15.96■□□□□ 0.14
DDX55-203ENST00000421670 CUL9Q8IWT3 2517 aa15.95■□□□□ 0.14
DDX55-203ENST00000421670 TMEM221A6NGB7 291 aa15.95■□□□□ 0.14
DDX55-203ENST00000421670 CCDC188H7C350 402 aa15.95■□□□□ 0.14
DDX55-203ENST00000421670 M0R296 226 aa15.95■□□□□ 0.14
DDX55-203ENST00000421670 NPC1O15118 1278 aa15.95■□□□□ 0.14
DDX55-203ENST00000421670 ZBTB24O43167 697 aaPredicted RBP15.95■□□□□ 0.14
DDX55-203ENST00000421670 SIN3BO75182 1162 aa15.95■□□□□ 0.14
DDX55-203ENST00000421670 HOXB2P14652 356 aa15.95■□□□□ 0.14
DDX55-203ENST00000421670 ITKQ08881 620 aa15.95■□□□□ 0.14
DDX55-203ENST00000421670 TEX44Q53QW1 395 aa15.95■□□□□ 0.14
DDX55-203ENST00000421670 TRMT11Q7Z4G4 463 aaKnown RBP15.95■□□□□ 0.14
DDX55-203ENST00000421670 BBS5Q8N3I7 341 aa15.95■□□□□ 0.14
DDX55-203ENST00000421670 SYNPOQ8N3V7 929 aa15.95■□□□□ 0.14
DDX55-203ENST00000421670 PCDH20Q8N6Y1 951 aaKnown RBP15.95■□□□□ 0.14
DDX55-203ENST00000421670 ISG20Q96AZ6 181 aaKnown RBP15.95■□□□□ 0.14
DDX55-203ENST00000421670 KRT12Q99456 494 aa15.95■□□□□ 0.14
DDX55-203ENST00000421670 GABRG3Q99928 467 aa15.95■□□□□ 0.14
DDX55-203ENST00000421670 MGME1Q9BQP7 344 aa15.95■□□□□ 0.14
DDX55-203ENST00000421670 DRG1Q9Y295 367 aaKnown RBP15.95■□□□□ 0.14
DDX55-203ENST00000421670 USP34Q70CQ2 3546 aa15.95■□□□□ 0.14
DDX55-203ENST00000421670 EDDM13A0A1B0GTR0 161 aa15.94■□□□□ 0.14
DDX55-203ENST00000421670 STK10O94804 968 aaKnown RBP15.94■□□□□ 0.14
DDX55-203ENST00000421670 IGSF6O95976 241 aa15.94■□□□□ 0.14
DDX55-203ENST00000421670 ZSCAN5DPP0CG00 497 aa15.94■□□□□ 0.14
DDX55-203ENST00000421670 NFKB1P19838 968 aa15.94■□□□□ 0.14
DDX55-203ENST00000421670 COL9A1P20849 921 aa15.94■□□□□ 0.14
DDX55-203ENST00000421670 GKP32189 559 aa15.94■□□□□ 0.14
DDX55-203ENST00000421670 CD68P34810 354 aaPredicted RBP15.94■□□□□ 0.14
DDX55-203ENST00000421670 CCNHP51946 323 aaPredicted RBP15.94■□□□□ 0.14
DDX55-203ENST00000421670 E2F5Q15329 346 aa15.94■□□□□ 0.14
DDX55-203ENST00000421670 ANKRD20A2Q5SQ80 823 aa15.94■□□□□ 0.14
DDX55-203ENST00000421670 C9orf64Q5T6V5 341 aa15.94■□□□□ 0.14
DDX55-203ENST00000421670 ANKRD20A1Q5TYW2 823 aa15.94■□□□□ 0.14
DDX55-203ENST00000421670 ANKRD20A3Q5VUR7 823 aa15.94■□□□□ 0.14
DDX55-203ENST00000421670 SDE2Q6IQ49 451 aa15.94■□□□□ 0.14
DDX55-203ENST00000421670 KIAA1211LQ6NV74 962 aa15.94■□□□□ 0.14
DDX55-203ENST00000421670 DPY19L3Q6ZPD9 716 aa15.94■□□□□ 0.14
DDX55-203ENST00000421670 RYBPQ8N488 228 aaPredicted RBP15.94■□□□□ 0.14
DDX55-203ENST00000421670 TAB3Q8N5C8 712 aaPredicted RBP15.94■□□□□ 0.14
DDX55-203ENST00000421670 CCDC89Q8N998 374 aa15.94■□□□□ 0.14
DDX55-203ENST00000421670 OR2AP1Q8NGE2 309 aa15.94■□□□□ 0.14
DDX55-203ENST00000421670 OR2A12Q8NGT7 310 aa15.94■□□□□ 0.14
DDX55-203ENST00000421670 ATL2Q8NHH9 583 aa15.94■□□□□ 0.14
DDX55-203ENST00000421670 CCDC26Q8TAB7 109 aa15.94■□□□□ 0.14
DDX55-203ENST00000421670 RTP4Q96DX8 246 aa15.94■□□□□ 0.14
DDX55-203ENST00000421670 TEKT5Q96M29 485 aa15.94■□□□□ 0.14
DDX55-203ENST00000421670 GDAP1L1Q96MZ0 367 aa15.94■□□□□ 0.14
DDX55-203ENST00000421670 SPATA13Q96N96 652 aa15.94■□□□□ 0.14
DDX55-203ENST00000421670 OSBPL6Q9BZF3 934 aa15.94■□□□□ 0.14
DDX55-203ENST00000421670 POLR1EQ9GZS1 481 aaKnown RBP15.94■□□□□ 0.14
DDX55-203ENST00000421670 C2orf42Q9NWW7 574 aa15.94■□□□□ 0.14
DDX55-203ENST00000421670 AMACRQ9UHK6 382 aa15.94■□□□□ 0.14
DDX55-203ENST00000421670 MMP17Q9ULZ9 603 aa15.94■□□□□ 0.14
DDX55-203ENST00000421670 ATP8A1Q9Y2Q0 1164 aa15.94■□□□□ 0.14
DDX55-203ENST00000421670 C5orf60A6NFR6 353 aa15.93■□□□□ 0.14
DDX55-203ENST00000421670 INSIG1O15503 277 aa15.93■□□□□ 0.14
DDX55-203ENST00000421670 PI15O43692 258 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms