RNA–Protein interactions for RNA: ENST00000420996.2

UPF3AP3-201, Transcript of UPF3A pseudogene 3, humanhuman

BASIC

Gene UPF3AP3, Length 769 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3AP3-201ENST00000420996 MAPK8IP2Q13387 824 aaPredicted RBP17.21■□□□□ 0.35
UPF3AP3-201ENST00000420996 FZD2Q14332 565 aa17.21■□□□□ 0.35
UPF3AP3-201ENST00000420996 ZNF542PQ5EBM4 170 aa17.21■□□□□ 0.35
UPF3AP3-201ENST00000420996 RETSATQ6NUM9 610 aa17.21■□□□□ 0.35
UPF3AP3-201ENST00000420996 KYAT3Q6YP21 454 aaKnown RBP17.21■□□□□ 0.35
UPF3AP3-201ENST00000420996 ZNF783Q6ZMS7 281 aa17.21■□□□□ 0.35
UPF3AP3-201ENST00000420996 PTAR1Q7Z6K3 402 aaPredicted RBP17.21■□□□□ 0.35
UPF3AP3-201ENST00000420996 TFAP2DQ7Z6R9 452 aa17.21■□□□□ 0.35
UPF3AP3-201ENST00000420996 CREBRFQ8IUR6 639 aa17.21■□□□□ 0.35
UPF3AP3-201ENST00000420996 WBP1Q96G27 269 aa17.21■□□□□ 0.35
UPF3AP3-201ENST00000420996 CEP44Q9C0F1 390 aa17.21■□□□□ 0.35
UPF3AP3-201ENST00000420996 OSBPL2Q9H1P3 480 aa17.21■□□□□ 0.35
UPF3AP3-201ENST00000420996 SNX10Q9Y5X0 201 aa17.21■□□□□ 0.35
UPF3AP3-201ENST00000420996 CSNK1G3Q9Y6M4 447 aa17.21■□□□□ 0.35
UPF3AP3-201ENST00000420996 KALRNO60229 2985 aa17.21■□□□□ 0.35
UPF3AP3-201ENST00000420996 SPTY2D1-AS1A0A0U1RR47 76 aa17.2■□□□□ 0.34
UPF3AP3-201ENST00000420996 ILVBLA1L0T0 632 aa17.2■□□□□ 0.34
UPF3AP3-201ENST00000420996 FOXN3O00409 490 aaPredicted RBP17.2■□□□□ 0.34
UPF3AP3-201ENST00000420996 RIOK3O14730 519 aaKnown RBP17.2■□□□□ 0.34
UPF3AP3-201ENST00000420996 AP1G1O43747 822 aa17.2■□□□□ 0.34
UPF3AP3-201ENST00000420996 NEBLO76041 1014 aa17.2■□□□□ 0.34
UPF3AP3-201ENST00000420996 ENDOD1O94919 500 aa17.2■□□□□ 0.34
UPF3AP3-201ENST00000420996 PAK4O96013 591 aaPredicted RBP17.2■□□□□ 0.34
UPF3AP3-201ENST00000420996 CSF2P04141 144 aa17.2■□□□□ 0.34
UPF3AP3-201ENST00000420996 ADRB3P13945 408 aa17.2■□□□□ 0.34
UPF3AP3-201ENST00000420996 ITGB7P26010 798 aa17.2■□□□□ 0.34
UPF3AP3-201ENST00000420996 L1CAMP32004 1257 aa17.2■□□□□ 0.34
UPF3AP3-201ENST00000420996 RHDQ02161 417 aa17.2■□□□□ 0.34
UPF3AP3-201ENST00000420996 FGL2Q14314 439 aa17.2■□□□□ 0.34
UPF3AP3-201ENST00000420996 SLC25A52Q3SY17 297 aa17.2■□□□□ 0.34
UPF3AP3-201ENST00000420996 ZCCHC8Q6NZY4 707 aaKnown RBP17.2■□□□□ 0.34
UPF3AP3-201ENST00000420996 SLC47A2Q86VL8 602 aa17.2■□□□□ 0.34
UPF3AP3-201ENST00000420996 ZSCAN30Q86W11 494 aa17.2■□□□□ 0.34
UPF3AP3-201ENST00000420996 PCDH20Q8N6Y1 951 aaKnown RBP17.2■□□□□ 0.34
UPF3AP3-201ENST00000420996 OR7D4Q8NG98 312 aa17.2■□□□□ 0.34
UPF3AP3-201ENST00000420996 IFI44Q8TCB0 444 aa17.2■□□□□ 0.34
UPF3AP3-201ENST00000420996 MAPK15Q8TD08 544 aa17.2■□□□□ 0.34
UPF3AP3-201ENST00000420996 HEPHQ9BQS7 1158 aa17.2■□□□□ 0.34
UPF3AP3-201ENST00000420996 SPON2Q9BUD6 331 aa17.2■□□□□ 0.34
UPF3AP3-201ENST00000420996 DPH1Q9BZG8 443 aa17.2■□□□□ 0.34
UPF3AP3-201ENST00000420996 ASCL3Q9NQ33 180 aa17.2■□□□□ 0.34
UPF3AP3-201ENST00000420996 NCKIPSDQ9NZQ3 722 aa17.2■□□□□ 0.34
UPF3AP3-201ENST00000420996 RWDD2AQ9UIY3 292 aa17.2■□□□□ 0.34
UPF3AP3-201ENST00000420996 FADS3Q9Y5Q0 445 aa17.2■□□□□ 0.34
UPF3AP3-201ENST00000420996 COL27A1Q8IZC6 1860 aaPredicted RBP17.19■□□□□ 0.34
UPF3AP3-201ENST00000420996 H3BM21 787 aa17.19■□□□□ 0.34
UPF3AP3-201ENST00000420996 RAD51BO15315 384 aa17.19■□□□□ 0.34
UPF3AP3-201ENST00000420996 ZMPSTE24O75844 475 aa17.19■□□□□ 0.34
UPF3AP3-201ENST00000420996 NME1P15531 152 aaKnown RBP17.19■□□□□ 0.34
UPF3AP3-201ENST00000420996 SCNN1AP37088 669 aa17.19■□□□□ 0.34
UPF3AP3-201ENST00000420996 RABIFP47224 123 aa17.19■□□□□ 0.34
UPF3AP3-201ENST00000420996 GABRB2P47870 512 aa17.19■□□□□ 0.34
UPF3AP3-201ENST00000420996 SERPINH1P50454 418 aaKnown RBP17.19■□□□□ 0.34
UPF3AP3-201ENST00000420996 BPIFB4P59827 614 aa17.19■□□□□ 0.34
UPF3AP3-201ENST00000420996 ISXQ2M1V0 245 aa17.19■□□□□ 0.34
UPF3AP3-201ENST00000420996 TAF1BQ53T94 588 aaPredicted RBP17.19■□□□□ 0.34
UPF3AP3-201ENST00000420996 ARTNQ5T4W7 220 aa17.19■□□□□ 0.34
UPF3AP3-201ENST00000420996 PARGQ86W56 976 aa17.19■□□□□ 0.34
UPF3AP3-201ENST00000420996 TMEM35BQ8NCS4 154 aa17.19■□□□□ 0.34
UPF3AP3-201ENST00000420996 ZNF548Q8NEK5 533 aaPredicted RBP17.19■□□□□ 0.34
UPF3AP3-201ENST00000420996 KCNE4Q8WWG9 221 aa17.19■□□□□ 0.34
UPF3AP3-201ENST00000420996 GRAMD1AQ96CP6 724 aa17.19■□□□□ 0.34
UPF3AP3-201ENST00000420996 LENG8Q96PV6 779 aaPredicted RBP17.19■□□□□ 0.34
UPF3AP3-201ENST00000420996 HAPLN3Q96S86 360 aa17.19■□□□□ 0.34
UPF3AP3-201ENST00000420996 TBCBQ99426 244 aa17.19■□□□□ 0.34
UPF3AP3-201ENST00000420996 CPNE5Q9HCH3 593 aa17.19■□□□□ 0.34
UPF3AP3-201ENST00000420996 SIX2Q9NPC8 291 aa17.19■□□□□ 0.34
UPF3AP3-201ENST00000420996 PLCB1Q9NQ66 1216 aa17.19■□□□□ 0.34
UPF3AP3-201ENST00000420996 TMPRSS4Q9NRS4 437 aa17.19■□□□□ 0.34
UPF3AP3-201ENST00000420996 THSD1Q9NS62 852 aa17.19■□□□□ 0.34
UPF3AP3-201ENST00000420996 ZNF212Q9UDV6 495 aa17.19■□□□□ 0.34
UPF3AP3-201ENST00000420996 SALL4Q9UJQ4 1053 aa17.19■□□□□ 0.34
UPF3AP3-201ENST00000420996 DNAJC12Q9UKB3 198 aa17.19■□□□□ 0.34
UPF3AP3-201ENST00000420996 AJAP1Q9UKB5 411 aaPredicted RBP17.19■□□□□ 0.34
UPF3AP3-201ENST00000420996 SRGAP2O75044 1071 aa17.18■□□□□ 0.34
UPF3AP3-201ENST00000420996 CDH5P33151 784 aaPredicted RBP17.18■□□□□ 0.34
UPF3AP3-201ENST00000420996 DNA2P51530 1060 aa17.18■□□□□ 0.34
UPF3AP3-201ENST00000420996 CCNHP51946 323 aaPredicted RBP17.18■□□□□ 0.34
UPF3AP3-201ENST00000420996 SGCGQ13326 291 aa17.18■□□□□ 0.34
UPF3AP3-201ENST00000420996 CARD16Q5EG05 197 aa17.18■□□□□ 0.34
UPF3AP3-201ENST00000420996 ARHGAP40Q5TG30 622 aa17.18■□□□□ 0.34
UPF3AP3-201ENST00000420996 IGF2-ASQ6U949 168 aa17.18■□□□□ 0.34
UPF3AP3-201ENST00000420996 IRF2BP1Q8IU81 584 aa17.18■□□□□ 0.34
UPF3AP3-201ENST00000420996 PLPP6Q8IY26 295 aa17.18■□□□□ 0.34
UPF3AP3-201ENST00000420996 FAM71AQ8IYT1 594 aa17.18■□□□□ 0.34
UPF3AP3-201ENST00000420996 C18orf8Q96DM3 657 aa17.18■□□□□ 0.34
UPF3AP3-201ENST00000420996 KLF6Q99612 283 aaPredicted RBP17.18■□□□□ 0.34
UPF3AP3-201ENST00000420996 C1QTNF2Q9BXJ5 285 aa17.18■□□□□ 0.34
UPF3AP3-201ENST00000420996 ATP13A1Q9HD20 1204 aa17.18■□□□□ 0.34
UPF3AP3-201ENST00000420996 IPO11Q9UI26 975 aaKnown RBP17.18■□□□□ 0.34
UPF3AP3-201ENST00000420996 KLF15Q9UIH9 416 aa17.18■□□□□ 0.34
UPF3AP3-201ENST00000420996 MGAQ8IWI9 3026 aa17.18■□□□□ 0.34
UPF3AP3-201ENST00000420996 CPED1A4D0V7 1026 aa17.17■□□□□ 0.34
UPF3AP3-201ENST00000420996 FPGTO14772 594 aa17.17■□□□□ 0.34
UPF3AP3-201ENST00000420996 KLK10O43240 276 aa17.17■□□□□ 0.34
UPF3AP3-201ENST00000420996 AQP9O43315 295 aa17.17■□□□□ 0.34
UPF3AP3-201ENST00000420996 TGM2P21980 687 aa17.17■□□□□ 0.34
UPF3AP3-201ENST00000420996 ARF5P84085 180 aa17.17■□□□□ 0.34
UPF3AP3-201ENST00000420996 GNA12Q03113 381 aa17.17■□□□□ 0.34
UPF3AP3-201ENST00000420996 CDKN3Q16667 212 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms