RNA–Protein interactions for RNA: ENST00000420746.1

TRIM39-206, Transcript of tripartite motif containing 39, humanhuman

TSL 3

Gene TRIM39, Length 708 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-206ENST00000420746 PPP1R9BQ96SB3 815 aa9.22□□□□□ -0.93
TRIM39-206ENST00000420746 KLF6Q99612 283 aaPredicted RBP9.22□□□□□ -0.93
TRIM39-206ENST00000420746 CYP3A43Q9HB55 503 aa9.22□□□□□ -0.93
TRIM39-206ENST00000420746 CYP4F12Q9HCS2 524 aa9.22□□□□□ -0.93
TRIM39-206ENST00000420746 DYRK4Q9NR20 520 aa9.22□□□□□ -0.93
TRIM39-206ENST00000420746 PILRAQ9UKJ1 303 aa9.22□□□□□ -0.93
TRIM39-206ENST00000420746 FARP1Q9Y4F1 1045 aaPredicted RBP9.22□□□□□ -0.93
TRIM39-206ENST00000420746 SHANK1Q9Y566 2161 aa9.22□□□□□ -0.93
TRIM39-206ENST00000420746 AP1G1O43747 822 aa9.21□□□□□ -0.94
TRIM39-206ENST00000420746 VNN1O95497 513 aa9.21□□□□□ -0.94
TRIM39-206ENST00000420746 CPNE6O95741 557 aa9.21□□□□□ -0.94
TRIM39-206ENST00000420746 ASS1P00966 412 aaKnown RBP9.21□□□□□ -0.94
TRIM39-206ENST00000420746 PRNPP04156 253 aa9.21□□□□□ -0.94
TRIM39-206ENST00000420746 CTSLP07711 333 aa9.21□□□□□ -0.94
TRIM39-206ENST00000420746 TCN2P20062 427 aa9.21□□□□□ -0.94
TRIM39-206ENST00000420746 THOP1P52888 689 aa9.21□□□□□ -0.94
TRIM39-206ENST00000420746 SLC8A3P57103 927 aa9.21□□□□□ -0.94
TRIM39-206ENST00000420746 RAB15P59190 212 aa9.21□□□□□ -0.94
TRIM39-206ENST00000420746 ABHD18Q0P651 414 aa9.21□□□□□ -0.94
TRIM39-206ENST00000420746 MRPL49Q13405 166 aaKnown RBP9.21□□□□□ -0.94
TRIM39-206ENST00000420746 TRA2AQ13595 282 aaKnown RBP eCLIP9.21□□□□□ -0.94
TRIM39-206ENST00000420746 TESK1Q15569 626 aa9.21□□□□□ -0.94
TRIM39-206ENST00000420746 DLG2Q15700 870 aa9.21□□□□□ -0.94
TRIM39-206ENST00000420746 MAP9Q49MG5 647 aa9.21□□□□□ -0.94
TRIM39-206ENST00000420746 BSPRYQ5W0U4 402 aa9.21□□□□□ -0.94
TRIM39-206ENST00000420746 Q6ZVU0 165 aa9.21□□□□□ -0.94
TRIM39-206ENST00000420746 GKN2Q86XP6 184 aa9.21□□□□□ -0.94
TRIM39-206ENST00000420746 NLGN4XQ8N0W4 816 aa9.21□□□□□ -0.94
TRIM39-206ENST00000420746 SCML4Q8N228 414 aa9.21□□□□□ -0.94
TRIM39-206ENST00000420746 FAM184AQ8NB25 1140 aa9.21□□□□□ -0.94
TRIM39-206ENST00000420746 NLGN4YQ8NFZ3 816 aaPredicted RBP9.21□□□□□ -0.94
TRIM39-206ENST00000420746 PDCD6IPQ8WUM4 868 aaKnown RBP9.21□□□□□ -0.94
TRIM39-206ENST00000420746 RNF34Q969K3 372 aa9.21□□□□□ -0.94
TRIM39-206ENST00000420746 MYEOVQ96EZ4 313 aa9.21□□□□□ -0.94
TRIM39-206ENST00000420746 PPP1R16AQ96I34 528 aa9.21□□□□□ -0.94
TRIM39-206ENST00000420746 TEFMQ96QE5 360 aaKnown RBP9.21□□□□□ -0.94
TRIM39-206ENST00000420746 C1QTNF2Q9BXJ5 285 aa9.21□□□□□ -0.94
TRIM39-206ENST00000420746 ULBP1Q9BZM6 244 aa9.21□□□□□ -0.94
TRIM39-206ENST00000420746 UNKQ9C0B0 810 aaKnown RBP9.21□□□□□ -0.94
TRIM39-206ENST00000420746 SEMA6CQ9H3T2 930 aa9.21□□□□□ -0.94
TRIM39-206ENST00000420746 AGPAT3Q9NRZ7 376 aa9.21□□□□□ -0.94
TRIM39-206ENST00000420746 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.21□□□□□ -0.94
TRIM39-206ENST00000420746 SIRPGQ9P1W8 387 aa9.21□□□□□ -0.94
TRIM39-206ENST00000420746 SLC25A13Q9UJS0 675 aa9.21□□□□□ -0.94
TRIM39-206ENST00000420746 PNMA8BQ9ULN7 279 aaPredicted RBP9.21□□□□□ -0.94
TRIM39-206ENST00000420746 GPR34Q9UPC5 381 aa9.21□□□□□ -0.94
TRIM39-206ENST00000420746 B3GALT1Q9Y5Z6 326 aa9.21□□□□□ -0.94
TRIM39-206ENST00000420746 MED13LQ71F56 2210 aa9.21□□□□□ -0.94
TRIM39-206ENST00000420746 ZNF106Q9H2Y7 1883 aaKnown RBP9.21□□□□□ -0.94
TRIM39-206ENST00000420746 TACC2O95359 2948 aa9.2□□□□□ -0.94
TRIM39-206ENST00000420746 CCDC168Q8NDH2 2452 aa9.2□□□□□ -0.94
TRIM39-206ENST00000420746 ARHGAP10A1A4S6 786 aa9.2□□□□□ -0.94
TRIM39-206ENST00000420746 B4E171 279 aa9.2□□□□□ -0.94
TRIM39-206ENST00000420746 KPNA3O00505 521 aaPredicted RBP9.2□□□□□ -0.94
TRIM39-206ENST00000420746 TGFB1I1O43294 461 aa9.2□□□□□ -0.94
TRIM39-206ENST00000420746 NUDT21O43809 227 aaKnown RBP9.2□□□□□ -0.94
TRIM39-206ENST00000420746 CHRNA3P32297 505 aa9.2□□□□□ -0.94
TRIM39-206ENST00000420746 TSPAN7P41732 249 aa9.2□□□□□ -0.94
TRIM39-206ENST00000420746 PMS2P54278 862 aa9.2□□□□□ -0.94
TRIM39-206ENST00000420746 PPARDQ03181 441 aa9.2□□□□□ -0.94
TRIM39-206ENST00000420746 NNTQ13423 1086 aa9.2□□□□□ -0.94
TRIM39-206ENST00000420746 ARHGAP44Q17R89 818 aa9.2□□□□□ -0.94
TRIM39-206ENST00000420746 ACCSLQ4AC99 568 aa9.2□□□□□ -0.94
TRIM39-206ENST00000420746 ZRANB3Q5FWF4 1079 aa9.2□□□□□ -0.94
TRIM39-206ENST00000420746 FAXCQ5TGI0 409 aa9.2□□□□□ -0.94
TRIM39-206ENST00000420746 SV2BQ7L1I2 683 aa9.2□□□□□ -0.94
TRIM39-206ENST00000420746 PIM3Q86V86 326 aa9.2□□□□□ -0.94
TRIM39-206ENST00000420746 SKAP1Q86WV1 359 aa9.2□□□□□ -0.94
TRIM39-206ENST00000420746 C12orf56Q8IXR9 622 aa9.2□□□□□ -0.94
TRIM39-206ENST00000420746 EDEM1Q92611 657 aa9.2□□□□□ -0.94
TRIM39-206ENST00000420746 PMEPA1Q969W9 287 aa9.2□□□□□ -0.94
TRIM39-206ENST00000420746 EDEM3Q9BZQ6 932 aa9.2□□□□□ -0.94
TRIM39-206ENST00000420746 SPRY4Q9C004 299 aa9.2□□□□□ -0.94
TRIM39-206ENST00000420746 NUCKS1Q9H1E3 243 aaKnown RBP9.2□□□□□ -0.94
TRIM39-206ENST00000420746 TRIT1Q9H3H1 467 aaKnown RBP9.2□□□□□ -0.94
TRIM39-206ENST00000420746 PANK4Q9NVE7 773 aa9.2□□□□□ -0.94
TRIM39-206ENST00000420746 PCSK5Q92824 1860 aa9.19□□□□□ -0.94
TRIM39-206ENST00000420746 ANKHD1Q8IWZ3 2542 aaKnown RBP9.19□□□□□ -0.94
TRIM39-206ENST00000420746 LOC101059948A0A1B0GTJ6 334 aa9.19□□□□□ -0.94
TRIM39-206ENST00000420746 BMP15O95972 392 aa9.19□□□□□ -0.94
TRIM39-206ENST00000420746 CELA2BP08218 269 aaPredicted RBP9.19□□□□□ -0.94
TRIM39-206ENST00000420746 PDGFRAP16234 1089 aa9.19□□□□□ -0.94
TRIM39-206ENST00000420746 HOXB4P17483 251 aaPredicted RBP9.19□□□□□ -0.94
TRIM39-206ENST00000420746 PDCP20941 246 aa9.19□□□□□ -0.94
TRIM39-206ENST00000420746 HOXD13P35453 343 aa9.19□□□□□ -0.94
TRIM39-206ENST00000420746 NEK3P51956 506 aa9.19□□□□□ -0.94
TRIM39-206ENST00000420746 HK3P52790 923 aa9.19□□□□□ -0.94
TRIM39-206ENST00000420746 TBX4P57082 545 aa9.19□□□□□ -0.94
TRIM39-206ENST00000420746 SGCGQ13326 291 aa9.19□□□□□ -0.94
TRIM39-206ENST00000420746 INPP5JQ15735 1006 aaPredicted RBP9.19□□□□□ -0.94
TRIM39-206ENST00000420746 ZACNQ401N2 412 aa9.19□□□□□ -0.94
TRIM39-206ENST00000420746 DCAF12Q5T6F0 453 aa9.19□□□□□ -0.94
TRIM39-206ENST00000420746 CEP135Q66GS9 1140 aa9.19□□□□□ -0.94
TRIM39-206ENST00000420746 ARHGAP17Q68EM7 881 aa9.19□□□□□ -0.94
TRIM39-206ENST00000420746 OGFOD3Q6PK18 319 aa9.19□□□□□ -0.94
TRIM39-206ENST00000420746 APLFQ8IW19 511 aaPredicted RBP9.19□□□□□ -0.94
TRIM39-206ENST00000420746 TP53INP2Q8IXH6 220 aa9.19□□□□□ -0.94
TRIM39-206ENST00000420746 CFAP52Q8N1V2 620 aa9.19□□□□□ -0.94
TRIM39-206ENST00000420746 SH2D3CQ8N5H7 860 aa9.19□□□□□ -0.94
TRIM39-206ENST00000420746 Q8N9G6 341 aaPredicted RBP9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms