RNA–Protein interactions for RNA: ENST00000419629.1

SDCBPP3-201, Transcript of syndecan binding protein pseudogene 3, humanhuman

BASIC

Gene SDCBPP3, Length 891 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPP3-201ENST00000419629 HMX3A6NHT5 357 aa3.62□□□□□ -1.83
SDCBPP3-201ENST00000419629 M0QYT0 321 aa3.62□□□□□ -1.83
SDCBPP3-201ENST00000419629 CHUKO15111 745 aa3.62□□□□□ -1.83
SDCBPP3-201ENST00000419629 POLR3GO15318 223 aaPredicted RBP3.62□□□□□ -1.83
SDCBPP3-201ENST00000419629 UGDHO60701 494 aa3.62□□□□□ -1.83
SDCBPP3-201ENST00000419629 ZC3H11AO75152 810 aaKnown RBP eCLIP3.62□□□□□ -1.83
SDCBPP3-201ENST00000419629 ERLIN2O94905 339 aa3.62□□□□□ -1.83
SDCBPP3-201ENST00000419629 NFATC1O95644 943 aa3.62□□□□□ -1.83
SDCBPP3-201ENST00000419629 LDHAP00338 332 aaKnown RBP3.62□□□□□ -1.83
SDCBPP3-201ENST00000419629 ALDOCP09972 364 aaKnown RBP3.62□□□□□ -1.83
SDCBPP3-201ENST00000419629 RFPL3SP0C7P2 107 aa3.62□□□□□ -1.83
SDCBPP3-201ENST00000419629 CCDC192P0DO97 292 aa3.62□□□□□ -1.83
SDCBPP3-201ENST00000419629 TNFRSF1BP20333 461 aa3.62□□□□□ -1.83
SDCBPP3-201ENST00000419629 CASTP20810 708 aaKnown RBP3.62□□□□□ -1.83
SDCBPP3-201ENST00000419629 SERPINA4P29622 427 aa3.62□□□□□ -1.83
SDCBPP3-201ENST00000419629 CIITAP33076 1130 aa3.62□□□□□ -1.83
SDCBPP3-201ENST00000419629 MAGEA8P43361 318 aa3.62□□□□□ -1.83
SDCBPP3-201ENST00000419629 OAZ1P54368 228 aa3.62□□□□□ -1.83
SDCBPP3-201ENST00000419629 TUBB4BP68371 445 aa3.62□□□□□ -1.83
SDCBPP3-201ENST00000419629 DDR1Q08345 913 aa3.62□□□□□ -1.83
SDCBPP3-201ENST00000419629 GALNT1Q10472 559 aaPredicted RBP3.62□□□□□ -1.83
SDCBPP3-201ENST00000419629 MTX1Q13505 466 aa3.62□□□□□ -1.83
SDCBPP3-201ENST00000419629 SMC1AQ14683 1233 aaKnown RBP3.62□□□□□ -1.83
SDCBPP3-201ENST00000419629 MVPQ14764 893 aaKnown RBP3.62□□□□□ -1.83
SDCBPP3-201ENST00000419629 CCDC96Q2M329 555 aa3.62□□□□□ -1.83
SDCBPP3-201ENST00000419629 ZNF628Q5EBL2 1059 aa3.62□□□□□ -1.83
SDCBPP3-201ENST00000419629 TANGO2Q6ICL3 276 aa3.62□□□□□ -1.83
SDCBPP3-201ENST00000419629 CCDC50Q8IVM0 306 aa3.62□□□□□ -1.83
SDCBPP3-201ENST00000419629 CEP112Q8N8E3 955 aa3.62□□□□□ -1.83
SDCBPP3-201ENST00000419629 ENDOVQ8N8Q3 282 aaKnown RBP3.62□□□□□ -1.83
SDCBPP3-201ENST00000419629 CCDC26Q8TAB7 109 aa3.62□□□□□ -1.83
SDCBPP3-201ENST00000419629 BICD2Q8TD16 824 aa3.62□□□□□ -1.83
SDCBPP3-201ENST00000419629 TRAPPC12Q8WVT3 735 aa3.62□□□□□ -1.83
SDCBPP3-201ENST00000419629 TCP11Q8WWU5 503 aa3.62□□□□□ -1.83
SDCBPP3-201ENST00000419629 CENPIQ92674 756 aaPredicted RBP3.62□□□□□ -1.83
SDCBPP3-201ENST00000419629 TRIM63Q969Q1 353 aa3.62□□□□□ -1.83
SDCBPP3-201ENST00000419629 MCRS1Q96EZ8 462 aa3.62□□□□□ -1.83
SDCBPP3-201ENST00000419629 TRAPPC9Q96Q05 1148 aa3.62□□□□□ -1.83
SDCBPP3-201ENST00000419629 TSPAN18Q96SJ8 248 aa3.62□□□□□ -1.83
SDCBPP3-201ENST00000419629 THUMPD2Q9BTF0 503 aaKnown RBP3.62□□□□□ -1.83
SDCBPP3-201ENST00000419629 GATA5Q9BWX5 397 aaPredicted RBP3.62□□□□□ -1.83
SDCBPP3-201ENST00000419629 PABPC3Q9H361 631 aaKnown RBP3.62□□□□□ -1.83
SDCBPP3-201ENST00000419629 SAYSD1Q9NPB0 183 aa3.62□□□□□ -1.83
SDCBPP3-201ENST00000419629 CHCHD3Q9NX63 227 aaKnown RBP3.62□□□□□ -1.83
SDCBPP3-201ENST00000419629 LCMT1Q9UIC8 334 aa3.62□□□□□ -1.83
SDCBPP3-201ENST00000419629 MYO6Q9UM54 1294 aa3.62□□□□□ -1.83
SDCBPP3-201ENST00000419629 DDX19BQ9UMR2 479 aa3.62□□□□□ -1.83
SDCBPP3-201ENST00000419629 DAPP1Q9UN19 280 aa3.62□□□□□ -1.83
SDCBPP3-201ENST00000419629 ATP6V1DQ9Y5K8 247 aa3.62□□□□□ -1.83
SDCBPP3-201ENST00000419629 COPG1Q9Y678 874 aaKnown RBP3.62□□□□□ -1.83
SDCBPP3-201ENST00000419629 ATXN2Q99700 1313 aaKnown RBP3.62□□□□□ -1.83
SDCBPP3-201ENST00000419629 ANKRD50Q9ULJ7 1429 aa3.61□□□□□ -1.83
SDCBPP3-201ENST00000419629 KIR2DS5A0A0G2JLQ3 304 aa3.61□□□□□ -1.83
SDCBPP3-201ENST00000419629 FAM90A18PA6NE21 464 aa3.61□□□□□ -1.83
SDCBPP3-201ENST00000419629 FAM90A16PA6NEW6 464 aa3.61□□□□□ -1.83
SDCBPP3-201ENST00000419629 FAM90A9PA6NNJ1 464 aa3.61□□□□□ -1.83
SDCBPP3-201ENST00000419629 C4orf47A7E2U8 309 aa3.61□□□□□ -1.83
SDCBPP3-201ENST00000419629 FAM90A5PA8MXJ8 464 aa3.61□□□□□ -1.83
SDCBPP3-201ENST00000419629 MCIDASD6RGH6 385 aa3.61□□□□□ -1.83
SDCBPP3-201ENST00000419629 KIR2DS3K7RE56 304 aa3.61□□□□□ -1.83
SDCBPP3-201ENST00000419629 SEPT4O43236 478 aa3.61□□□□□ -1.83
SDCBPP3-201ENST00000419629 KINO60870 393 aaKnown RBP3.61□□□□□ -1.83
SDCBPP3-201ENST00000419629 LCKP06239 509 aa3.61□□□□□ -1.83
SDCBPP3-201ENST00000419629 TUBBP07437 444 aa3.61□□□□□ -1.83
SDCBPP3-201ENST00000419629 FGF2P09038 288 aa3.61□□□□□ -1.83
SDCBPP3-201ENST00000419629 FAM90A15PP0C7V4 464 aa3.61□□□□□ -1.83
SDCBPP3-201ENST00000419629 FAM90A14PP0C7W9 464 aa3.61□□□□□ -1.83
SDCBPP3-201ENST00000419629 GYS1P13807 737 aa3.61□□□□□ -1.83
SDCBPP3-201ENST00000419629 PAX7P23759 505 aa3.61□□□□□ -1.83
SDCBPP3-201ENST00000419629 ABCD1P33897 745 aa3.61□□□□□ -1.83
SDCBPP3-201ENST00000419629 CHKAP35790 457 aa3.61□□□□□ -1.83
SDCBPP3-201ENST00000419629 CD151P48509 253 aa3.61□□□□□ -1.83
SDCBPP3-201ENST00000419629 MRPL12P52815 198 aaKnown RBP3.61□□□□□ -1.83
SDCBPP3-201ENST00000419629 RCAN1P53805 252 aa3.61□□□□□ -1.83
SDCBPP3-201ENST00000419629 GSDMDP57764 484 aa3.61□□□□□ -1.83
SDCBPP3-201ENST00000419629 FOXL2P58012 376 aa3.61□□□□□ -1.83
SDCBPP3-201ENST00000419629 UBE2HP62256 183 aa3.61□□□□□ -1.83
SDCBPP3-201ENST00000419629 SHC2P98077 582 aa3.61□□□□□ -1.83
SDCBPP3-201ENST00000419629 GRIK3Q13003 919 aa3.61□□□□□ -1.83
SDCBPP3-201ENST00000419629 PRKG1Q13976 671 aa3.61□□□□□ -1.83
SDCBPP3-201ENST00000419629 GALNT3Q14435 633 aa3.61□□□□□ -1.83
SDCBPP3-201ENST00000419629 ASIC2Q16515 512 aa3.61□□□□□ -1.83
SDCBPP3-201ENST00000419629 FILIP1LQ4L180 1135 aa3.61□□□□□ -1.83
SDCBPP3-201ENST00000419629 HSP90B2PQ58FF3 399 aa3.61□□□□□ -1.83
SDCBPP3-201ENST00000419629 TTC39AQ5SRH9 613 aa3.61□□□□□ -1.83
SDCBPP3-201ENST00000419629 C10orf62Q5T681 223 aaPredicted RBP3.61□□□□□ -1.83
SDCBPP3-201ENST00000419629 TTC22Q5TAA0 569 aa3.61□□□□□ -1.83
SDCBPP3-201ENST00000419629 DGAT2L7PQ6IED9 249 aa3.61□□□□□ -1.83
SDCBPP3-201ENST00000419629 SULT6B1Q6IMI4 303 aa3.61□□□□□ -1.83
SDCBPP3-201ENST00000419629 ZSCAN25Q6NSZ9 544 aa3.61□□□□□ -1.83
SDCBPP3-201ENST00000419629 CCDC174Q6PII3 467 aa3.61□□□□□ -1.83
SDCBPP3-201ENST00000419629 TRAPPC11Q7Z392 1133 aa3.61□□□□□ -1.83
SDCBPP3-201ENST00000419629 ANKS1BQ7Z6G8 1248 aa3.61□□□□□ -1.83
SDCBPP3-201ENST00000419629 WDR63Q8IWG1 891 aa3.61□□□□□ -1.83
SDCBPP3-201ENST00000419629 DCP1BQ8IZD4 617 aaKnown RBP3.61□□□□□ -1.83
SDCBPP3-201ENST00000419629 ADGRF3Q8IZF5 1079 aa3.61□□□□□ -1.83
SDCBPP3-201ENST00000419629 PAQR4Q8N4S7 273 aaPredicted RBP3.61□□□□□ -1.83
SDCBPP3-201ENST00000419629 OTUD7AQ8TE49 926 aaPredicted RBP3.61□□□□□ -1.83
SDCBPP3-201ENST00000419629 WIPF2Q8TF74 440 aaPredicted RBP3.61□□□□□ -1.83
SDCBPP3-201ENST00000419629 CCT6BQ92526 530 aa3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms