RNA–Protein interactions for RNA: ENST00000418660.1

LINC00404-201, long intergenic non-protein coding RNA 404, humanhuman

TSL 2 BASIC

Gene LINC00404, Length 428 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00404-201ENST00000418660 RNF8O76064 485 aa16.78■□□□□ 0.28
LINC00404-201ENST00000418660 CCNHP51946 323 aaPredicted RBP16.78■□□□□ 0.28
LINC00404-201ENST00000418660 FAM193AP78312 1265 aa16.78■□□□□ 0.28
LINC00404-201ENST00000418660 SUZ12Q15022 739 aaKnown RBP16.78■□□□□ 0.28
LINC00404-201ENST00000418660 TRIP6Q15654 476 aaKnown RBP16.78■□□□□ 0.28
LINC00404-201ENST00000418660 TDRD12Q587J7 1177 aaKnown RBP16.78■□□□□ 0.28
LINC00404-201ENST00000418660 SLC45A4Q5BKX6 768 aa16.78■□□□□ 0.28
LINC00404-201ENST00000418660 NAPEPLDQ6IQ20 393 aa16.78■□□□□ 0.28
LINC00404-201ENST00000418660 ERN2Q76MJ5 926 aaKnown RBP16.78■□□□□ 0.28
LINC00404-201ENST00000418660 ARFGAP1Q8N6T3 406 aa16.78■□□□□ 0.28
LINC00404-201ENST00000418660 GRIN3AQ8TCU5 1115 aa16.78■□□□□ 0.28
LINC00404-201ENST00000418660 CPLX3Q8WVH0 158 aa16.78■□□□□ 0.28
LINC00404-201ENST00000418660 EIF3CQ99613 913 aaKnown RBP16.78■□□□□ 0.28
LINC00404-201ENST00000418660 TRIM7Q9C029 511 aa16.78■□□□□ 0.28
LINC00404-201ENST00000418660 MRPL47Q9HD33 250 aaKnown RBP16.78■□□□□ 0.28
LINC00404-201ENST00000418660 PLXNA2O75051 1894 aa16.78■□□□□ 0.28
LINC00404-201ENST00000418660 H0Y8X5 98 aa16.77■□□□□ 0.28
LINC00404-201ENST00000418660 FLRT2O43155 660 aa16.77■□□□□ 0.28
LINC00404-201ENST00000418660 CBFA2T3O75081 653 aa16.77■□□□□ 0.28
LINC00404-201ENST00000418660 SERPING1P05155 500 aa16.77■□□□□ 0.28
LINC00404-201ENST00000418660 MAT2AP31153 395 aaKnown RBP16.77■□□□□ 0.28
LINC00404-201ENST00000418660 FOXC1Q12948 553 aa16.77■□□□□ 0.28
LINC00404-201ENST00000418660 PARP15Q460N3 678 aa16.77■□□□□ 0.28
LINC00404-201ENST00000418660 SETMARQ53H47 684 aaPredicted RBP16.77■□□□□ 0.28
LINC00404-201ENST00000418660 ERMARDQ5T6L9 678 aa16.77■□□□□ 0.28
LINC00404-201ENST00000418660 VPS36Q86VN1 386 aa16.77■□□□□ 0.28
LINC00404-201ENST00000418660 ZNF354CQ86Y25 554 aa16.77■□□□□ 0.28
LINC00404-201ENST00000418660 UMODL1-AS1Q8N2C9 162 aa16.77■□□□□ 0.28
LINC00404-201ENST00000418660 SETD7Q8WTS6 366 aaKnown RBP16.77■□□□□ 0.28
LINC00404-201ENST00000418660 CASKIN2Q8WXE0 1202 aa16.77■□□□□ 0.28
LINC00404-201ENST00000418660 NCAPGQ9BPX3 1015 aa16.77■□□□□ 0.28
LINC00404-201ENST00000418660 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.77■□□□□ 0.28
LINC00404-201ENST00000418660 TM6SF2Q9BZW4 377 aa16.77■□□□□ 0.28
LINC00404-201ENST00000418660 GPATCH2LQ9NWQ4 482 aa16.77■□□□□ 0.28
LINC00404-201ENST00000418660 DONSONQ9NYP3 566 aa16.77■□□□□ 0.28
LINC00404-201ENST00000418660 MYO1AQ9UBC5 1043 aa16.77■□□□□ 0.28
LINC00404-201ENST00000418660 PCOLCE2Q9UKZ9 415 aa16.77■□□□□ 0.28
LINC00404-201ENST00000418660 AP4E1Q9UPM8 1137 aa16.77■□□□□ 0.28
LINC00404-201ENST00000418660 WASF3Q9UPY6 502 aa16.77■□□□□ 0.28
LINC00404-201ENST00000418660 LUC7L2Q9Y383 392 aaKnown RBP16.77■□□□□ 0.28
LINC00404-201ENST00000418660 RASA4BC9J798 803 aa16.76■□□□□ 0.27
LINC00404-201ENST00000418660 RASA4O43374 803 aa16.76■□□□□ 0.27
LINC00404-201ENST00000418660 BUB1O43683 1085 aa16.76■□□□□ 0.27
LINC00404-201ENST00000418660 PCDHGA12O60330 932 aa16.76■□□□□ 0.27
LINC00404-201ENST00000418660 RNGTTO60942 597 aaKnown RBP16.76■□□□□ 0.27
LINC00404-201ENST00000418660 GSRP00390 522 aa16.76■□□□□ 0.27
LINC00404-201ENST00000418660 ITGB7P26010 798 aa16.76■□□□□ 0.27
LINC00404-201ENST00000418660 MIPP30301 263 aa16.76■□□□□ 0.27
LINC00404-201ENST00000418660 CCT8P50990 548 aa16.76■□□□□ 0.27
LINC00404-201ENST00000418660 NEK3P51956 506 aa16.76■□□□□ 0.27
LINC00404-201ENST00000418660 TPI1P60174 286 aa16.76■□□□□ 0.27
LINC00404-201ENST00000418660 SNRPD1P62314 119 aaKnown RBP16.76■□□□□ 0.27
LINC00404-201ENST00000418660 LEKR1Q6ZMV7 388 aa16.76■□□□□ 0.27
LINC00404-201ENST00000418660 PSTKQ8IV42 348 aaKnown RBP16.76■□□□□ 0.27
LINC00404-201ENST00000418660 MFSD2AQ8NA29 543 aa16.76■□□□□ 0.27
LINC00404-201ENST00000418660 OR2AP1Q8NGE2 309 aa16.76■□□□□ 0.27
LINC00404-201ENST00000418660 RHBDD1Q8TEB9 315 aa16.76■□□□□ 0.27
LINC00404-201ENST00000418660 LRIG1Q96JA1 1093 aa16.76■□□□□ 0.27
LINC00404-201ENST00000418660 SNRNP25Q9BV90 132 aaKnown RBP16.76■□□□□ 0.27
LINC00404-201ENST00000418660 DHX35Q9H5Z1 703 aaKnown RBP16.76■□□□□ 0.27
LINC00404-201ENST00000418660 ZDHHC6Q9H6R6 413 aa16.76■□□□□ 0.27
LINC00404-201ENST00000418660 PCSK1NQ9UHG2 260 aa16.76■□□□□ 0.27
LINC00404-201ENST00000418660 CHD5Q8TDI0 1954 aa16.75■□□□□ 0.27
LINC00404-201ENST00000418660 A0A1B0GTQ1 180 aa16.75■□□□□ 0.27
LINC00404-201ENST00000418660 A0A1W2PQU0 124 aa16.75■□□□□ 0.27
LINC00404-201ENST00000418660 PRAMEF26H0Y7S4 382 aa16.75■□□□□ 0.27
LINC00404-201ENST00000418660 TLR4O00206 839 aa16.75■□□□□ 0.27
LINC00404-201ENST00000418660 EEF2KO00418 725 aaKnown RBP16.75■□□□□ 0.27
LINC00404-201ENST00000418660 PRPSAP2O60256 369 aa16.75■□□□□ 0.27
LINC00404-201ENST00000418660 LRCH4O75427 683 aa16.75■□□□□ 0.27
LINC00404-201ENST00000418660 TRIM16O95361 564 aa16.75■□□□□ 0.27
LINC00404-201ENST00000418660 GYPCP04921 128 aa16.75■□□□□ 0.27
LINC00404-201ENST00000418660 TPM3P06753 285 aa16.75■□□□□ 0.27
LINC00404-201ENST00000418660 OVGP1Q12889 678 aa16.75■□□□□ 0.27
LINC00404-201ENST00000418660 SERINC3Q13530 473 aa16.75■□□□□ 0.27
LINC00404-201ENST00000418660 STAT4Q14765 748 aa16.75■□□□□ 0.27
LINC00404-201ENST00000418660 ACAP1Q15027 740 aa16.75■□□□□ 0.27
LINC00404-201ENST00000418660 CA9Q16790 459 aa16.75■□□□□ 0.27
LINC00404-201ENST00000418660 INO80DQ53TQ3 878 aaPredicted RBP16.75■□□□□ 0.27
LINC00404-201ENST00000418660 GLRX5Q86SX6 157 aa16.75■□□□□ 0.27
LINC00404-201ENST00000418660 IQCHQ86VS3 1027 aa16.75■□□□□ 0.27
LINC00404-201ENST00000418660 HORMAD1Q86X24 394 aa16.75■□□□□ 0.27
LINC00404-201ENST00000418660 RYBPQ8N488 228 aaPredicted RBP16.75■□□□□ 0.27
LINC00404-201ENST00000418660 HMCESQ96FZ2 354 aa16.75■□□□□ 0.27
LINC00404-201ENST00000418660 PEBP4Q96S96 227 aa16.75■□□□□ 0.27
LINC00404-201ENST00000418660 ELF4Q99607 663 aaPredicted RBP16.75■□□□□ 0.27
LINC00404-201ENST00000418660 XPO4Q9C0E2 1151 aaKnown RBP16.75■□□□□ 0.27
LINC00404-201ENST00000418660 KLC2Q9H0B6 622 aa16.75■□□□□ 0.27
LINC00404-201ENST00000418660 GDF3Q9NR23 364 aa16.75■□□□□ 0.27
LINC00404-201ENST00000418660 MAGEC1O60732 1142 aa16.74■□□□□ 0.27
LINC00404-201ENST00000418660 TMCC1O94876 653 aa16.74■□□□□ 0.27
LINC00404-201ENST00000418660 PCDH8O95206 1070 aa16.74■□□□□ 0.27
LINC00404-201ENST00000418660 POP4O95707 220 aaKnown RBP16.74■□□□□ 0.27
LINC00404-201ENST00000418660 ADRB3P13945 408 aa16.74■□□□□ 0.27
LINC00404-201ENST00000418660 ZNF135P52742 658 aaPredicted RBP16.74■□□□□ 0.27
LINC00404-201ENST00000418660 NDST2P52849 883 aa16.74■□□□□ 0.27
LINC00404-201ENST00000418660 NXPH1P58417 271 aa16.74■□□□□ 0.27
LINC00404-201ENST00000418660 ZNF284Q2VY69 593 aa16.74■□□□□ 0.27
LINC00404-201ENST00000418660 MYLK3Q32MK0 819 aa16.74■□□□□ 0.27
LINC00404-201ENST00000418660 FBXL19Q6PCT2 694 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms