RNA–Protein interactions for RNA: ENST00000418600.6

SYNGAP1-202, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 5,828 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-202ENST00000418600 CREB5Q02930 508 aa17.14■□□□□ 0.33
SYNGAP1-202ENST00000418600 SLC35C1Q96A29 364 aa17.14■□□□□ 0.33
SYNGAP1-202ENST00000418600 GRAMD1AQ96CP6 724 aa17.14■□□□□ 0.33
SYNGAP1-202ENST00000418600 PPIEQ9UNP9 301 aaKnown RBP17.14■□□□□ 0.33
SYNGAP1-202ENST00000418600 E9PAM4 449 aa17.14■□□□□ 0.33
SYNGAP1-202ENST00000418600 SKAP2O75563 359 aaPredicted RBP17.14■□□□□ 0.33
SYNGAP1-202ENST00000418600 NTSP30990 170 aa17.14■□□□□ 0.33
SYNGAP1-202ENST00000418600 CASP5P51878 434 aa17.14■□□□□ 0.33
SYNGAP1-202ENST00000418600 CSTF1Q05048 431 aaKnown RBP17.14■□□□□ 0.33
SYNGAP1-202ENST00000418600 CASP8Q14790 479 aa17.14■□□□□ 0.33
SYNGAP1-202ENST00000418600 LMX1AQ8TE12 382 aa17.14■□□□□ 0.33
SYNGAP1-202ENST00000418600 RRAGDQ9NQL2 400 aaPredicted RBP17.14■□□□□ 0.33
SYNGAP1-202ENST00000418600 NOP53Q9NZM5 478 aaKnown RBP17.14■□□□□ 0.33
SYNGAP1-202ENST00000418600 WNT6Q9Y6F9 365 aa17.14■□□□□ 0.33
SYNGAP1-202ENST00000418600 KATNA1O75449 491 aa17.14■□□□□ 0.33
SYNGAP1-202ENST00000418600 GSNP06396 782 aa17.14■□□□□ 0.33
SYNGAP1-202ENST00000418600 AGXTP21549 392 aa17.14■□□□□ 0.33
SYNGAP1-202ENST00000418600 CNSTQ6PJW8 725 aa17.14■□□□□ 0.33
SYNGAP1-202ENST00000418600 ST13P5Q8NFI4 369 aaPredicted RBP17.14■□□□□ 0.33
SYNGAP1-202ENST00000418600 DIS3LQ8TF46 1054 aaKnown RBP17.14■□□□□ 0.33
SYNGAP1-202ENST00000418600 HERC2P3Q9BVR0 1158 aa17.14■□□□□ 0.33
SYNGAP1-202ENST00000418600 IRF2BPLQ9H1B7 796 aa17.14■□□□□ 0.33
SYNGAP1-202ENST00000418600 ZNF556Q9HAH1 456 aa17.14■□□□□ 0.33
SYNGAP1-202ENST00000418600 NWD2Q9ULI1 1742 aa17.14■□□□□ 0.33
SYNGAP1-202ENST00000418600 SEC31AO94979 1220 aaKnown RBP17.13■□□□□ 0.33
SYNGAP1-202ENST00000418600 GGCXP38435 758 aa17.13■□□□□ 0.33
SYNGAP1-202ENST00000418600 ALDH6A1Q02252 535 aaKnown RBP17.13■□□□□ 0.33
SYNGAP1-202ENST00000418600 STX3Q13277 289 aa17.13■□□□□ 0.33
SYNGAP1-202ENST00000418600 HIBCHQ6NVY1 386 aaPredicted RBP17.13■□□□□ 0.33
SYNGAP1-202ENST00000418600 PRUNE1Q86TP1 453 aa17.13■□□□□ 0.33
SYNGAP1-202ENST00000418600 EFCAB3Q8N7B9 438 aa17.13■□□□□ 0.33
SYNGAP1-202ENST00000418600 TADA1Q96BN2 335 aa17.13■□□□□ 0.33
SYNGAP1-202ENST00000418600 C9orf72Q96LT7 481 aa17.13■□□□□ 0.33
SYNGAP1-202ENST00000418600 STXBP5LQ9Y2K9 1186 aa17.13■□□□□ 0.33
SYNGAP1-202ENST00000418600 RRP15Q9Y3B9 282 aaKnown RBP17.13■□□□□ 0.33
SYNGAP1-202ENST00000418600 DGKIO75912 1065 aa17.13■□□□□ 0.33
SYNGAP1-202ENST00000418600 CSTF2P33240 577 aaKnown RBP eCLIP17.13■□□□□ 0.33
SYNGAP1-202ENST00000418600 INPP5AQ14642 412 aa17.13■□□□□ 0.33
SYNGAP1-202ENST00000418600 SERINC5Q86VE9 423 aa17.13■□□□□ 0.33
SYNGAP1-202ENST00000418600 MYCBPQ99417 103 aaPredicted RBP17.13■□□□□ 0.33
SYNGAP1-202ENST00000418600 INVSQ9Y283 1065 aa17.13■□□□□ 0.33
SYNGAP1-202ENST00000418600 RHOP08100 348 aa17.13■□□□□ 0.33
SYNGAP1-202ENST00000418600 MAGEA10P43363 369 aaPredicted RBP17.13■□□□□ 0.33
SYNGAP1-202ENST00000418600 FNTAP49354 379 aa17.13■□□□□ 0.33
SYNGAP1-202ENST00000418600 C16orf72Q14CZ0 275 aa17.13■□□□□ 0.33
SYNGAP1-202ENST00000418600 LPCAT2Q7L5N7 544 aa17.13■□□□□ 0.33
SYNGAP1-202ENST00000418600 COL26A1Q96A83 441 aa17.13■□□□□ 0.33
SYNGAP1-202ENST00000418600 ELAC2Q9BQ52 826 aaKnown RBP17.13■□□□□ 0.33
SYNGAP1-202ENST00000418600 MRPS33Q9Y291 106 aaKnown RBP17.13■□□□□ 0.33
SYNGAP1-202ENST00000418600 TBC1D30Q9Y2I9 924 aa17.13■□□□□ 0.33
SYNGAP1-202ENST00000418600 C9J4A7 227 aa17.13■□□□□ 0.33
SYNGAP1-202ENST00000418600 TPBGLP0DKB5 382 aa17.13■□□□□ 0.33
SYNGAP1-202ENST00000418600 GJA5P36382 358 aa17.13■□□□□ 0.33
SYNGAP1-202ENST00000418600 GNPDA1P46926 289 aa17.13■□□□□ 0.33
SYNGAP1-202ENST00000418600 CCR4P51679 360 aa17.13■□□□□ 0.33
SYNGAP1-202ENST00000418600 GHRHRQ02643 423 aa17.13■□□□□ 0.33
SYNGAP1-202ENST00000418600 SPANXN3Q5MJ09 141 aa17.13■□□□□ 0.33
SYNGAP1-202ENST00000418600 RABEPKQ7Z6M1 372 aa17.13■□□□□ 0.33
SYNGAP1-202ENST00000418600 KCNMB4Q86W47 210 aa17.13■□□□□ 0.33
SYNGAP1-202ENST00000418600 FAM129CQ86XR2 697 aa17.13■□□□□ 0.33
SYNGAP1-202ENST00000418600 SLC22A17Q8WUG5 538 aa17.13■□□□□ 0.33
SYNGAP1-202ENST00000418600 ATP6V1HQ9UI12 483 aa17.13■□□□□ 0.33
SYNGAP1-202ENST00000418600 HEBP2Q9Y5Z4 205 aa17.13■□□□□ 0.33
SYNGAP1-202ENST00000418600 RAD54BQ9Y620 910 aa17.13■□□□□ 0.33
SYNGAP1-202ENST00000418600 PGAM1P18669 254 aa17.13■□□□□ 0.33
SYNGAP1-202ENST00000418600 RBMS1P29558 406 aaKnown RBP17.13■□□□□ 0.33
SYNGAP1-202ENST00000418600 PIK3CGP48736 1102 aa17.13■□□□□ 0.33
SYNGAP1-202ENST00000418600 DPEP3Q9H4B8 488 aa17.13■□□□□ 0.33
SYNGAP1-202ENST00000418600 SNX12Q9UMY4 172 aa17.13■□□□□ 0.33
SYNGAP1-202ENST00000418600 PIPSLA2A3N6 862 aa17.12■□□□□ 0.33
SYNGAP1-202ENST00000418600 FAM107AO95990 144 aa17.12■□□□□ 0.33
SYNGAP1-202ENST00000418600 PDPK2PQ6A1A2 396 aa17.12■□□□□ 0.33
SYNGAP1-202ENST00000418600 TAPT1Q6NXT6 567 aa17.12■□□□□ 0.33
SYNGAP1-202ENST00000418600 ENPP7Q6UWV6 458 aa17.12■□□□□ 0.33
SYNGAP1-202ENST00000418600 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.12■□□□□ 0.33
SYNGAP1-202ENST00000418600 CDH19Q9H159 772 aa17.12■□□□□ 0.33
SYNGAP1-202ENST00000418600 GGA2Q9UJY4 613 aa17.12■□□□□ 0.33
SYNGAP1-202ENST00000418600 HEMK1Q9Y5R4 338 aaPredicted RBP17.12■□□□□ 0.33
SYNGAP1-202ENST00000418600 RPSAP08865 295 aaKnown RBP17.12■□□□□ 0.33
SYNGAP1-202ENST00000418600 PEX19P40855 299 aa17.12■□□□□ 0.33
SYNGAP1-202ENST00000418600 CASRP41180 1078 aa17.12■□□□□ 0.33
SYNGAP1-202ENST00000418600 GSTA3Q16772 222 aa17.12■□□□□ 0.33
SYNGAP1-202ENST00000418600 TBC1D25Q3MII6 688 aa17.12■□□□□ 0.33
SYNGAP1-202ENST00000418600 FAM151BQ6UXP7 276 aa17.12■□□□□ 0.33
SYNGAP1-202ENST00000418600 LINGO4Q6UY18 593 aa17.12■□□□□ 0.33
SYNGAP1-202ENST00000418600 C11orf74Q86VG3 221 aa17.12■□□□□ 0.33
SYNGAP1-202ENST00000418600 ATG4AQ8WYN0 398 aa17.12■□□□□ 0.33
SYNGAP1-202ENST00000418600 ADH1BP00325 375 aa17.12■□□□□ 0.33
SYNGAP1-202ENST00000418600 ATP4AP20648 1035 aa17.12■□□□□ 0.33
SYNGAP1-202ENST00000418600 SLC25A52Q3SY17 297 aa17.12■□□□□ 0.33
SYNGAP1-202ENST00000418600 ZNF571Q7Z3V5 609 aaPredicted RBP17.12■□□□□ 0.33
SYNGAP1-202ENST00000418600 FBXO36Q8NEA4 188 aa17.12■□□□□ 0.33
SYNGAP1-202ENST00000418600 CCDC90BQ9GZT6 254 aa17.12■□□□□ 0.33
SYNGAP1-202ENST00000418600 L1RE1Q9UN81 338 aa17.12■□□□□ 0.33
SYNGAP1-202ENST00000418600 TRPC5OSA6NMA1 111 aa17.12■□□□□ 0.33
SYNGAP1-202ENST00000418600 GJB6O95452 261 aa17.12■□□□□ 0.33
SYNGAP1-202ENST00000418600 KCNJ1P48048 391 aa17.12■□□□□ 0.33
SYNGAP1-202ENST00000418600 GJA8P48165 433 aa17.12■□□□□ 0.33
SYNGAP1-202ENST00000418600 SKOR1P84550 965 aa17.12■□□□□ 0.33
SYNGAP1-202ENST00000418600 DAB2IPQ5VWQ8 1189 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms