RNA–Protein interactions for RNA: ENST00000418258.5

PTCH1-205, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 7,815 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-205ENST00000418258 BATF3Q9NR55 127 aa11.34□□□□□ -0.59
PTCH1-205ENST00000418258 GULP1Q9UBP9 304 aa11.34□□□□□ -0.59
PTCH1-205ENST00000418258 PTGES3LE9PB15 166 aa11.34□□□□□ -0.59
PTCH1-205ENST00000418258 PRG2P13727 222 aa11.34□□□□□ -0.59
PTCH1-205ENST00000418258 OASLQ15646 514 aaKnown RBP11.34□□□□□ -0.59
PTCH1-205ENST00000418258 ZNF605Q86T29 641 aa11.34□□□□□ -0.59
PTCH1-205ENST00000418258 DHFR2Q86XF0 187 aa11.34□□□□□ -0.59
PTCH1-205ENST00000418258 ADGRG2Q8IZP9 1017 aa11.34□□□□□ -0.59
PTCH1-205ENST00000418258 WNT8BQ93098 351 aa11.34□□□□□ -0.59
PTCH1-205ENST00000418258 C18orf25Q96B23 403 aaPredicted RBP11.34□□□□□ -0.59
PTCH1-205ENST00000418258 ZNF304Q9HCX3 659 aa11.34□□□□□ -0.59
PTCH1-205ENST00000418258 SLC40A1Q9NP59 571 aa11.34□□□□□ -0.59
PTCH1-205ENST00000418258 NT5C1B-RDH14C9J2C7 533 aa11.34□□□□□ -0.59
PTCH1-205ENST00000418258 MCIDASD6RGH6 385 aa11.34□□□□□ -0.59
PTCH1-205ENST00000418258 UBA1P22314 1058 aaKnown RBP11.34□□□□□ -0.59
PTCH1-205ENST00000418258 NEK3P51956 506 aa11.34□□□□□ -0.59
PTCH1-205ENST00000418258 ZNF135P52742 658 aaPredicted RBP11.34□□□□□ -0.59
PTCH1-205ENST00000418258 MAP2K5Q13163 448 aa11.34□□□□□ -0.59
PTCH1-205ENST00000418258 CCDC185Q8N715 623 aa11.34□□□□□ -0.59
PTCH1-205ENST00000418258 KIAA0895Q8NCT3 520 aa11.34□□□□□ -0.59
PTCH1-205ENST00000418258 ATL1Q8WXF7 558 aa11.34□□□□□ -0.59
PTCH1-205ENST00000418258 ALG9Q9H6U8 611 aa11.34□□□□□ -0.59
PTCH1-205ENST00000418258 NAALADL1Q9UQQ1 740 aa11.34□□□□□ -0.59
PTCH1-205ENST00000418258 GMFGO60234 142 aa11.34□□□□□ -0.59
PTCH1-205ENST00000418258 SERPINE1P05121 402 aa11.34□□□□□ -0.59
PTCH1-205ENST00000418258 SLC35G4P0C7Q5 338 aa11.34□□□□□ -0.59
PTCH1-205ENST00000418258 RHAGQ02094 409 aa11.34□□□□□ -0.59
PTCH1-205ENST00000418258 IRF8Q02556 426 aa11.34□□□□□ -0.59
PTCH1-205ENST00000418258 XKR6Q5GH73 641 aa11.34□□□□□ -0.59
PTCH1-205ENST00000418258 ARMC4Q5T2S8 1044 aa11.34□□□□□ -0.59
PTCH1-205ENST00000418258 BHLHB9Q6PI77 547 aa11.34□□□□□ -0.59
PTCH1-205ENST00000418258 FBXO25Q8TCJ0 367 aa11.34□□□□□ -0.59
PTCH1-205ENST00000418258 VAT1Q99536 393 aa11.34□□□□□ -0.59
PTCH1-205ENST00000418258 REEP1Q9H902 201 aa11.34□□□□□ -0.59
PTCH1-205ENST00000418258 DNPEPQ9ULA0 475 aa11.34□□□□□ -0.59
PTCH1-205ENST00000418258 ST3GAL5Q9UNP4 418 aa11.34□□□□□ -0.59
PTCH1-205ENST00000418258 MAGEA13PA6NCF6 341 aa11.34□□□□□ -0.59
PTCH1-205ENST00000418258 CD3EAPO15446 510 aaKnown RBP11.34□□□□□ -0.59
PTCH1-205ENST00000418258 NQO1P15559 274 aaKnown RBP11.34□□□□□ -0.59
PTCH1-205ENST00000418258 RGMBQ6NW40 437 aa11.34□□□□□ -0.59
PTCH1-205ENST00000418258 SLC30A9Q6PML9 568 aa11.34□□□□□ -0.59
PTCH1-205ENST00000418258 CPA6Q8N4T0 437 aa11.34□□□□□ -0.59
PTCH1-205ENST00000418258 SVOPQ8N4V2 548 aa11.34□□□□□ -0.59
PTCH1-205ENST00000418258 ZFP28Q8NHY6 868 aa11.34□□□□□ -0.59
PTCH1-205ENST00000418258 DTNBP1Q96EV8 351 aa11.34□□□□□ -0.59
PTCH1-205ENST00000418258 INTS7Q9NVH2 962 aaKnown RBP11.34□□□□□ -0.59
PTCH1-205ENST00000418258 PTPRMP28827 1452 aa11.34□□□□□ -0.59
PTCH1-205ENST00000418258 RIC1Q4ADV7 1423 aa11.34□□□□□ -0.59
PTCH1-205ENST00000418258 PTPRUQ92729 1446 aa11.34□□□□□ -0.59
PTCH1-205ENST00000418258 CCL16O15467 120 aa11.33□□□□□ -0.6
PTCH1-205ENST00000418258 ETS1P14921 441 aa11.33□□□□□ -0.6
PTCH1-205ENST00000418258 WARSP23381 471 aaKnown RBP11.33□□□□□ -0.6
PTCH1-205ENST00000418258 MRPS35P82673 323 aaKnown RBP11.33□□□□□ -0.6
PTCH1-205ENST00000418258 PURAQ00577 322 aaKnown RBP11.33□□□□□ -0.6
PTCH1-205ENST00000418258 BNC1Q01954 994 aa11.33□□□□□ -0.6
PTCH1-205ENST00000418258 HYIQ5T013 277 aa11.33□□□□□ -0.6
PTCH1-205ENST00000418258 KIAA0408Q6ZU52 694 aa11.33□□□□□ -0.6
PTCH1-205ENST00000418258 PSTKQ8IV42 348 aaKnown RBP11.33□□□□□ -0.6
PTCH1-205ENST00000418258 GPR156Q8NFN8 814 aa11.33□□□□□ -0.6
PTCH1-205ENST00000418258 CEP44Q9C0F1 390 aa11.33□□□□□ -0.6
PTCH1-205ENST00000418258 RACGAP1Q9H0H5 632 aa11.33□□□□□ -0.6
PTCH1-205ENST00000418258 NEK6Q9HC98 313 aa11.33□□□□□ -0.6
PTCH1-205ENST00000418258 MYO5BQ9ULV0 1848 aa11.33□□□□□ -0.6
PTCH1-205ENST00000418258 DIP2CQ9Y2E4 1556 aa11.33□□□□□ -0.6
PTCH1-205ENST00000418258 SLC25A14O95258 325 aaPredicted RBP11.33□□□□□ -0.6
PTCH1-205ENST00000418258 GLUD1P00367 558 aa11.33□□□□□ -0.6
PTCH1-205ENST00000418258 TCP10LQ8TDR4 215 aa11.33□□□□□ -0.6
PTCH1-205ENST00000418258 MYLPFQ96A32 169 aa11.33□□□□□ -0.6
PTCH1-205ENST00000418258 SLC39A8Q9C0K1 460 aa11.33□□□□□ -0.6
PTCH1-205ENST00000418258 SLC28A3Q9HAS3 691 aa11.33□□□□□ -0.6
PTCH1-205ENST00000418258 RBM7Q9Y580 266 aaKnown RBP11.33□□□□□ -0.6
PTCH1-205ENST00000418258 MAPK8P45983 427 aa11.33□□□□□ -0.6
PTCH1-205ENST00000418258 FRG1Q14331 258 aaKnown RBP11.33□□□□□ -0.6
PTCH1-205ENST00000418258 TARBP2Q15633 366 aaKnown RBP11.33□□□□□ -0.6
PTCH1-205ENST00000418258 C15orf59Q2T9L4 293 aaPredicted RBP11.33□□□□□ -0.6
PTCH1-205ENST00000418258 DACT2Q5SW24 774 aa11.33□□□□□ -0.6
PTCH1-205ENST00000418258 RSBN1Q5VWQ0 802 aaPredicted RBP11.33□□□□□ -0.6
PTCH1-205ENST00000418258 METTL3Q86U44 580 aaKnown RBP11.33□□□□□ -0.6
PTCH1-205ENST00000418258 TMPRSS4Q9NRS4 437 aa11.33□□□□□ -0.6
PTCH1-205ENST00000418258 SLC12A4Q9UP95 1085 aa11.33□□□□□ -0.6
PTCH1-205ENST00000418258 CTPS1P17812 591 aa11.33□□□□□ -0.6
PTCH1-205ENST00000418258 IGFALSP35858 605 aa11.33□□□□□ -0.6
PTCH1-205ENST00000418258 PSMD5Q16401 504 aa11.33□□□□□ -0.6
PTCH1-205ENST00000418258 PLA2G4EQ3MJ16 856 aa11.33□□□□□ -0.6
PTCH1-205ENST00000418258 CATSPERGQ6ZRH7 1159 aa11.33□□□□□ -0.6
PTCH1-205ENST00000418258 STK32CQ86UX6 486 aa11.33□□□□□ -0.6
PTCH1-205ENST00000418258 REXO1L1PQ8IX06 675 aa11.33□□□□□ -0.6
PTCH1-205ENST00000418258 HJURPQ8NCD3 748 aaPredicted RBP11.33□□□□□ -0.6
PTCH1-205ENST00000418258 KLHL31Q9H511 634 aa11.33□□□□□ -0.6
PTCH1-205ENST00000418258 NRXN1Q9ULB1 1477 aa11.33□□□□□ -0.6
PTCH1-205ENST00000418258 TPP1O14773 563 aa11.33□□□□□ -0.6
PTCH1-205ENST00000418258 CCDC166P0CW27 439 aa11.33□□□□□ -0.6
PTCH1-205ENST00000418258 NR2F1P10589 423 aa11.33□□□□□ -0.6
PTCH1-205ENST00000418258 RPL9P32969 192 aaKnown RBP11.33□□□□□ -0.6
PTCH1-205ENST00000418258 PTENP60484 403 aa11.33□□□□□ -0.6
PTCH1-205ENST00000418258 STXBP5Q5T5C0 1151 aa11.33□□□□□ -0.6
PTCH1-205ENST00000418258 KDM7AQ6ZMT4 941 aa11.33□□□□□ -0.6
PTCH1-205ENST00000418258 ZDHHC13Q8IUH4 622 aa11.33□□□□□ -0.6
PTCH1-205ENST00000418258 TMBIM4Q9HC24 238 aa11.33□□□□□ -0.6
PTCH1-205ENST00000418258 ZFP14Q9HCL3 533 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms