RNA–Protein interactions for RNA: ENST00000417448.1

VCP-202, Transcript of valosin containing protein, humanhuman

TSL 3

Gene VCP, Length 722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-202ENST00000417448 ACSL4O60488 711 aa18.41■□□□□ 0.54
VCP-202ENST00000417448 RTN2O75298 545 aa18.41■□□□□ 0.54
VCP-202ENST00000417448 POLR2EP19388 210 aaKnown RBP18.41■□□□□ 0.54
VCP-202ENST00000417448 RPL7AP62424 266 aaKnown RBP18.41■□□□□ 0.54
VCP-202ENST00000417448 ZNF211Q13398 564 aaPredicted RBP18.41■□□□□ 0.54
VCP-202ENST00000417448 EIF4EBP2Q13542 120 aaPredicted RBP18.41■□□□□ 0.54
VCP-202ENST00000417448 TRIM14Q14142 442 aa18.41■□□□□ 0.54
VCP-202ENST00000417448 CDO1Q16878 200 aa18.41■□□□□ 0.54
VCP-202ENST00000417448 COLEC12Q5KU26 742 aa18.41■□□□□ 0.54
VCP-202ENST00000417448 C9orf64Q5T6V5 341 aa18.41■□□□□ 0.54
VCP-202ENST00000417448 DNAJC24Q6P3W2 148 aa18.41■□□□□ 0.54
VCP-202ENST00000417448 INO80CQ6PI98 192 aaPredicted RBP18.41■□□□□ 0.54
VCP-202ENST00000417448 LSMEM2Q8N112 164 aa18.41■□□□□ 0.54
VCP-202ENST00000417448 MFSD2AQ8NA29 543 aa18.41■□□□□ 0.54
VCP-202ENST00000417448 DNAJC7Q99615 494 aa18.41■□□□□ 0.54
VCP-202ENST00000417448 TRIM62Q9BVG3 475 aa18.41■□□□□ 0.54
VCP-202ENST00000417448 SELENOOQ9BVL4 669 aa18.41■□□□□ 0.54
VCP-202ENST00000417448 TRIM7Q9C029 511 aa18.41■□□□□ 0.54
VCP-202ENST00000417448 POLR1BQ9H9Y6 1135 aa18.41■□□□□ 0.54
VCP-202ENST00000417448 ABHD10Q9NUJ1 306 aa18.41■□□□□ 0.54
VCP-202ENST00000417448 A0A1W2PNU3 283 aaPredicted RBP18.4■□□□□ 0.54
VCP-202ENST00000417448 OPA1O60313 960 aa18.4■□□□□ 0.54
VCP-202ENST00000417448 CSO75390 466 aaKnown RBP18.4■□□□□ 0.54
VCP-202ENST00000417448 ADCY5O95622 1261 aa18.4■□□□□ 0.54
VCP-202ENST00000417448 TPM1P09493 284 aa18.4■□□□□ 0.54
VCP-202ENST00000417448 KRT3P12035 628 aa18.4■□□□□ 0.54
VCP-202ENST00000417448 PDGFRAP16234 1089 aa18.4■□□□□ 0.54
VCP-202ENST00000417448 HNRNPH3P31942 346 aaKnown RBP18.4■□□□□ 0.54
VCP-202ENST00000417448 SLC8A1P32418 973 aa18.4■□□□□ 0.54
VCP-202ENST00000417448 DEUP1Q05D60 604 aa18.4■□□□□ 0.54
VCP-202ENST00000417448 CCDC14Q49A88 953 aa18.4■□□□□ 0.54
VCP-202ENST00000417448 SLC45A4Q5BKX6 768 aa18.4■□□□□ 0.54
VCP-202ENST00000417448 FAM133BQ5BKY9 247 aaKnown RBP18.4■□□□□ 0.54
VCP-202ENST00000417448 ADGRF1Q5T601 910 aa18.4■□□□□ 0.54
VCP-202ENST00000417448 RAP1GAP2Q684P5 730 aa18.4■□□□□ 0.54
VCP-202ENST00000417448 NAPEPLDQ6IQ20 393 aa18.4■□□□□ 0.54
VCP-202ENST00000417448 OR14C36Q8NHC7 312 aa18.4■□□□□ 0.54
VCP-202ENST00000417448 MRFAP1L1Q96HT8 127 aa18.4■□□□□ 0.54
VCP-202ENST00000417448 MCEEQ96PE7 176 aa18.4■□□□□ 0.54
VCP-202ENST00000417448 MAGEB5Q9BZ81 275 aa18.4■□□□□ 0.54
VCP-202ENST00000417448 INTS6Q9UL03 887 aaKnown RBP18.4■□□□□ 0.54
VCP-202ENST00000417448 BZW2Q9Y6E2 419 aaKnown RBP18.4■□□□□ 0.54
VCP-202ENST00000417448 AHCTF1Q8WYP5 2266 aa18.4■□□□□ 0.54
VCP-202ENST00000417448 A0A1B0GVM2 712 aa18.39■□□□□ 0.53
VCP-202ENST00000417448 C2CD4BA6NLJ0 364 aa18.39■□□□□ 0.53
VCP-202ENST00000417448 SIGLEC16A6NMB1 481 aa18.39■□□□□ 0.53
VCP-202ENST00000417448 I6L893 689 aaPredicted RBP18.39■□□□□ 0.53
VCP-202ENST00000417448 TERTO14746 1132 aaKnown RBP18.39■□□□□ 0.53
VCP-202ENST00000417448 RNASEH1O60930 286 aaKnown RBP18.39■□□□□ 0.53
VCP-202ENST00000417448 GIMD1P0DJR0 217 aa18.39■□□□□ 0.53
VCP-202ENST00000417448 SCNN1AP37088 669 aa18.39■□□□□ 0.53
VCP-202ENST00000417448 PSMD8P48556 350 aa18.39■□□□□ 0.53
VCP-202ENST00000417448 SKOR1P84550 965 aa18.39■□□□□ 0.53
VCP-202ENST00000417448 DAB2P98082 770 aa18.39■□□□□ 0.53
VCP-202ENST00000417448 OGDHQ02218 1023 aa18.39■□□□□ 0.53
VCP-202ENST00000417448 SLC25A52Q3SY17 297 aa18.39■□□□□ 0.53
VCP-202ENST00000417448 CCDC122Q5T0U0 273 aa18.39■□□□□ 0.53
VCP-202ENST00000417448 NUGGCQ68CJ6 796 aa18.39■□□□□ 0.53
VCP-202ENST00000417448 UNC45BQ8IWX7 931 aa18.39■□□□□ 0.53
VCP-202ENST00000417448 DRC7Q8IY82 874 aa18.39■□□□□ 0.53
VCP-202ENST00000417448 CFAP52Q8N1V2 620 aa18.39■□□□□ 0.53
VCP-202ENST00000417448 TC2NQ8N9U0 490 aa18.39■□□□□ 0.53
VCP-202ENST00000417448 SPC24Q8NBT2 197 aa18.39■□□□□ 0.53
VCP-202ENST00000417448 C3orf20Q8ND61 904 aa18.39■□□□□ 0.53
VCP-202ENST00000417448 NT5C3BQ969T7 300 aa18.39■□□□□ 0.53
VCP-202ENST00000417448 TTC17Q96AE7 1141 aa18.39■□□□□ 0.53
VCP-202ENST00000417448 ZNF653Q96CK0 615 aa18.39■□□□□ 0.53
VCP-202ENST00000417448 DEPDC7Q96QD5 511 aa18.39■□□□□ 0.53
VCP-202ENST00000417448 FAM129BQ96TA1 746 aa18.39■□□□□ 0.53
VCP-202ENST00000417448 ANP32EQ9BTT0 268 aa18.39■□□□□ 0.53
VCP-202ENST00000417448 UCKL1Q9NWZ5 548 aa18.39■□□□□ 0.53
VCP-202ENST00000417448 STIM2Q9P246 746 aa18.39■□□□□ 0.53
VCP-202ENST00000417448 CNOT8Q9UFF9 292 aaKnown RBP18.39■□□□□ 0.53
VCP-202ENST00000417448 DOCK4Q8N1I0 1966 aa18.39■□□□□ 0.53
VCP-202ENST00000417448 LRRK2Q5S007 2527 aa18.38■□□□□ 0.53
VCP-202ENST00000417448 TTC34A8MYJ7 566 aa18.38■□□□□ 0.53
VCP-202ENST00000417448 KCNU1A8MYU2 1149 aa18.38■□□□□ 0.53
VCP-202ENST00000417448 TBL1XO60907 577 aa18.38■□□□□ 0.53
VCP-202ENST00000417448 APOEP02649 317 aa18.38■□□□□ 0.53
VCP-202ENST00000417448 GZMAP12544 262 aa18.38■□□□□ 0.53
VCP-202ENST00000417448 MYF5P13349 255 aa18.38■□□□□ 0.53
VCP-202ENST00000417448 CSKP41240 450 aa18.38■□□□□ 0.53
VCP-202ENST00000417448 SLC11A2P49281 568 aa18.38■□□□□ 0.53
VCP-202ENST00000417448 NUMBP49757 651 aa18.38■□□□□ 0.53
VCP-202ENST00000417448 RPS24P62847 133 aaKnown RBP18.38■□□□□ 0.53
VCP-202ENST00000417448 NFATC3Q12968 1075 aa18.38■□□□□ 0.53
VCP-202ENST00000417448 ARID5BQ14865 1188 aa18.38■□□□□ 0.53
VCP-202ENST00000417448 TSR1Q2NL82 804 aaKnown RBP18.38■□□□□ 0.53
VCP-202ENST00000417448 PPP1R15BQ5SWA1 713 aa18.38■□□□□ 0.53
VCP-202ENST00000417448 PIK3R6Q5UE93 754 aa18.38■□□□□ 0.53
VCP-202ENST00000417448 SND1Q7KZF4 910 aaKnown RBP eCLIP18.38■□□□□ 0.534e-7■■□□□ 11.6
VCP-202ENST00000417448 C14orf80Q86SX3 495 aa18.38■□□□□ 0.53
VCP-202ENST00000417448 FAM131BQ86XD5 332 aa18.38■□□□□ 0.53
VCP-202ENST00000417448 LGI2Q8N0V4 545 aa18.38■□□□□ 0.53
VCP-202ENST00000417448 EXD3Q8N9H8 876 aa18.38■□□□□ 0.53
VCP-202ENST00000417448 OR4C6Q8NH72 309 aa18.38■□□□□ 0.53
VCP-202ENST00000417448 PACSIN1Q9BY11 444 aa18.38■□□□□ 0.53
VCP-202ENST00000417448 SIK2Q9H0K1 926 aa18.38■□□□□ 0.53
VCP-202ENST00000417448 ISCUQ9H1K1 167 aa18.38■□□□□ 0.53
VCP-202ENST00000417448 THSD1Q9NS62 852 aa18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms