RNA–Protein interactions for RNA: ENST00000417344.2

CCNT1-202, Transcript of cyclin T1, humanhuman

TSL 2

Gene CCNT1, Length 2,017 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNT1-202ENST00000417344 BCAS1O75363 584 aaPredicted RBP6.48□□□□□ -1.37
CCNT1-202ENST00000417344 TADA2AO75478 443 aa6.48□□□□□ -1.37
CCNT1-202ENST00000417344 CCNKO75909 580 aa6.48□□□□□ -1.37
CCNT1-202ENST00000417344 TOMM70O94826 608 aa6.48□□□□□ -1.37
CCNT1-202ENST00000417344 FAM13AO94988 1023 aa6.48□□□□□ -1.37
CCNT1-202ENST00000417344 TOP3BO95985 862 aaKnown RBP6.48□□□□□ -1.37
CCNT1-202ENST00000417344 IL2RAP01589 272 aa6.48□□□□□ -1.37
CCNT1-202ENST00000417344 GSNP06396 782 aa6.48□□□□□ -1.37
CCNT1-202ENST00000417344 SPATA31C1P0DKV0 1188 aa6.48□□□□□ -1.37
CCNT1-202ENST00000417344 BMP2P12643 396 aa6.48□□□□□ -1.37
CCNT1-202ENST00000417344 CCND2P30279 289 aa6.48□□□□□ -1.37
CCNT1-202ENST00000417344 RRM2P31350 389 aa6.48□□□□□ -1.37
CCNT1-202ENST00000417344 RPL22P35268 128 aaKnown RBP6.48□□□□□ -1.37
CCNT1-202ENST00000417344 NUDT1P36639 197 aa6.48□□□□□ -1.37
CCNT1-202ENST00000417344 POLR2IP36954 125 aaKnown RBP6.48□□□□□ -1.37
CCNT1-202ENST00000417344 ECE1P42892 770 aa6.48□□□□□ -1.37
CCNT1-202ENST00000417344 NUMBP49757 651 aa6.48□□□□□ -1.37
CCNT1-202ENST00000417344 VAMP7P51809 220 aa6.48□□□□□ -1.37
CCNT1-202ENST00000417344 ABCE1P61221 599 aaKnown RBP6.48□□□□□ -1.37
CCNT1-202ENST00000417344 RACK1P63244 317 aaKnown RBP6.48□□□□□ -1.37
CCNT1-202ENST00000417344 AQP6Q13520 282 aa6.48□□□□□ -1.37
CCNT1-202ENST00000417344 TRIM25Q14258 630 aaKnown RBP6.48□□□□□ -1.37
CCNT1-202ENST00000417344 RFTN1Q14699 578 aaPredicted RBP6.48□□□□□ -1.37
CCNT1-202ENST00000417344 POU6F1Q14863 301 aa6.48□□□□□ -1.37
CCNT1-202ENST00000417344 SNX17Q15036 470 aa6.48□□□□□ -1.37
CCNT1-202ENST00000417344 ATP13A4Q4VNC1 1196 aa6.48□□□□□ -1.37
CCNT1-202ENST00000417344 SLC9B1Q4ZJI4 515 aa6.48□□□□□ -1.37
CCNT1-202ENST00000417344 STXBP5Q5T5C0 1151 aa6.48□□□□□ -1.37
CCNT1-202ENST00000417344 SLFN13Q68D06 897 aa6.48□□□□□ -1.37
CCNT1-202ENST00000417344 KRT39Q6A163 491 aa6.48□□□□□ -1.37
CCNT1-202ENST00000417344 GTF2IRD2BQ6EKJ0 949 aa6.48□□□□□ -1.37
CCNT1-202ENST00000417344 TATDN1Q6P1N9 297 aa6.48□□□□□ -1.37
CCNT1-202ENST00000417344 ZNF773Q6PK81 442 aa6.48□□□□□ -1.37
CCNT1-202ENST00000417344 SPOCD1Q6ZMY3 1216 aa6.48□□□□□ -1.37
CCNT1-202ENST00000417344 PRR23CQ6ZRP0 262 aa6.48□□□□□ -1.37
CCNT1-202ENST00000417344 ADAMTSL2Q86TH1 951 aa6.48□□□□□ -1.37
CCNT1-202ENST00000417344 GTF2IRD2Q86UP8 949 aa6.48□□□□□ -1.37
CCNT1-202ENST00000417344 CAMK1DQ8IU85 385 aa6.48□□□□□ -1.37
CCNT1-202ENST00000417344 SPARTQ8N0X7 666 aa6.48□□□□□ -1.37
CCNT1-202ENST00000417344 CBR4Q8N4T8 237 aa6.48□□□□□ -1.37
CCNT1-202ENST00000417344 DCLK2Q8N568 766 aa6.48□□□□□ -1.37
CCNT1-202ENST00000417344 GALNT6Q8NCL4 622 aa6.48□□□□□ -1.37
CCNT1-202ENST00000417344 LILRB1Q8NHL6 650 aaPredicted RBP6.48□□□□□ -1.37
CCNT1-202ENST00000417344 GRPEL2Q8TAA5 225 aa6.48□□□□□ -1.37
CCNT1-202ENST00000417344 SLC35B2Q8TB61 432 aa6.48□□□□□ -1.37
CCNT1-202ENST00000417344 SEPT8Q92599 483 aa6.48□□□□□ -1.37
CCNT1-202ENST00000417344 TTC9Q92623 222 aa6.48□□□□□ -1.37
CCNT1-202ENST00000417344 SDCCAG3Q96C92 435 aa6.48□□□□□ -1.37
CCNT1-202ENST00000417344 HDAC11Q96DB2 347 aa6.48□□□□□ -1.37
CCNT1-202ENST00000417344 DYNLL2Q96FJ2 89 aa6.48□□□□□ -1.37
CCNT1-202ENST00000417344 CFAP36Q96G28 342 aa6.48□□□□□ -1.37
CCNT1-202ENST00000417344 DUS3LQ96G46 650 aaKnown RBP6.48□□□□□ -1.37
CCNT1-202ENST00000417344 NGLY1Q96IV0 654 aa6.48□□□□□ -1.37
CCNT1-202ENST00000417344 VCPIP1Q96JH7 1222 aa6.48□□□□□ -1.37
CCNT1-202ENST00000417344 ZNF560Q96MR9 790 aa6.48□□□□□ -1.37
CCNT1-202ENST00000417344 PSKH2Q96QS6 385 aa6.48□□□□□ -1.37
CCNT1-202ENST00000417344 ZNF717Q9BY31 904 aaPredicted RBP6.48□□□□□ -1.37
CCNT1-202ENST00000417344 YTHDF1Q9BYJ9 559 aaKnown RBP6.48□□□□□ -1.37
CCNT1-202ENST00000417344 ZNF304Q9HCX3 659 aa6.48□□□□□ -1.37
CCNT1-202ENST00000417344 CD320Q9NPF0 282 aa6.48□□□□□ -1.37
CCNT1-202ENST00000417344 C20orf96Q9NUD7 363 aaPredicted RBP6.48□□□□□ -1.37
CCNT1-202ENST00000417344 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP6.48□□□□□ -1.37
CCNT1-202ENST00000417344 PKD2L2Q9NZM6 624 aa6.48□□□□□ -1.37
CCNT1-202ENST00000417344 GMIPQ9P107 970 aa6.48□□□□□ -1.37
CCNT1-202ENST00000417344 TRMT112Q9UI30 125 aaKnown RBP6.48□□□□□ -1.37
CCNT1-202ENST00000417344 ZNF221Q9UK13 617 aa6.48□□□□□ -1.37
CCNT1-202ENST00000417344 DSEQ9UL01 958 aa6.48□□□□□ -1.37
CCNT1-202ENST00000417344 CNOT6Q9ULM6 557 aaKnown RBP6.48□□□□□ -1.37
CCNT1-202ENST00000417344 ZNRF3Q9ULT6 936 aa6.48□□□□□ -1.37
CCNT1-202ENST00000417344 CAB39Q9Y376 341 aaPredicted RBP6.48□□□□□ -1.37
CCNT1-202ENST00000417344 hCG_1818297A0A087WSY0 165 aa6.47□□□□□ -1.37
CCNT1-202ENST00000417344 ISPDA4D126 451 aa6.47□□□□□ -1.37
CCNT1-202ENST00000417344 hCG_2039718K7EN88 272 aa6.47□□□□□ -1.37
CCNT1-202ENST00000417344 ENPP3O14638 875 aa6.47□□□□□ -1.37
CCNT1-202ENST00000417344 SLC22A2O15244 555 aa6.47□□□□□ -1.37
CCNT1-202ENST00000417344 PAPSS1O43252 624 aaPredicted RBP6.47□□□□□ -1.37
CCNT1-202ENST00000417344 AVILO75366 819 aa6.47□□□□□ -1.37
CCNT1-202ENST00000417344 MFN2O95140 757 aa6.47□□□□□ -1.37
CCNT1-202ENST00000417344 CLIC3O95833 236 aa6.47□□□□□ -1.37
CCNT1-202ENST00000417344 CAPN1P07384 714 aa6.47□□□□□ -1.37
CCNT1-202ENST00000417344 TMEM191BP0C7N4 346 aa6.47□□□□□ -1.37
CCNT1-202ENST00000417344 BMP4P12644 408 aa6.47□□□□□ -1.37
CCNT1-202ENST00000417344 PROZP22891 400 aa6.47□□□□□ -1.37
CCNT1-202ENST00000417344 ARRB2P32121 409 aa6.47□□□□□ -1.37
CCNT1-202ENST00000417344 PTGS2P35354 604 aa6.47□□□□□ -1.37
CCNT1-202ENST00000417344 HADHAP40939 763 aa6.47□□□□□ -1.37
CCNT1-202ENST00000417344 YAP1P46937 504 aaKnown RBP6.47□□□□□ -1.37
CCNT1-202ENST00000417344 HARS2P49590 506 aaKnown RBP6.47□□□□□ -1.37
CCNT1-202ENST00000417344 RNF144AP50876 292 aaPredicted RBP6.47□□□□□ -1.37
CCNT1-202ENST00000417344 MRPS15P82914 257 aaKnown RBP6.47□□□□□ -1.37
CCNT1-202ENST00000417344 TAGLNQ01995 201 aaKnown RBP6.47□□□□□ -1.37
CCNT1-202ENST00000417344 ILF2Q12905 390 aaKnown RBP6.47□□□□□ -1.37
CCNT1-202ENST00000417344 SLC13A2Q13183 592 aa6.47□□□□□ -1.37
CCNT1-202ENST00000417344 DUSP7Q16829 419 aa6.47□□□□□ -1.37
CCNT1-202ENST00000417344 INSCQ1MX18 579 aa6.47□□□□□ -1.37
CCNT1-202ENST00000417344 C2CD6Q53TS8 623 aa6.47□□□□□ -1.37
CCNT1-202ENST00000417344 TFDP3Q5H9I0 405 aa6.47□□□□□ -1.37
CCNT1-202ENST00000417344 INTS11Q5TA45 600 aaKnown RBP6.47□□□□□ -1.37
CCNT1-202ENST00000417344 UNC5AQ6ZN44 842 aa6.47□□□□□ -1.37
CCNT1-202ENST00000417344 STXBP4Q6ZWJ1 553 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms